XLOC_034626 (gene) - C. hemisphaerica

Overview
NameXLOC_034626
Unique NameXLOC_034626
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_247:73959..79643+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_034626 ID=XLOC_034626|Name=XLOC_034626|organism=Clytia hemisphaerica|type=gene|length=5685bp|location=Sequence derived from alignment at scaffold_247:73959..79643+ (Clytia hemisphaerica)
AGACTGTATCTTAGGTAAAACGTTGCGTAGttcaatgaattttgaattcc GCAGATACTGGTTGGTCTATTTACAGACACGATAGAGGTCGGGGGTTGCT ATAGATAAGACCTGGACCTGGCTTCATTCATTGGACTTTTAAGGACTAGA ATTTTGAGGGAATATTGTATTGTTATAAGGGTCTTTGAGCAACCAAAAAG AGCCTACTCAATAGGGAAAGGATTGTTATTAGCCGGAAGAAGAAAACATA TGCCTCTACTTTCTATCCAAAATTTTGTGCTTTAGTTTTCAATCTTGTTT TCTAGTGAATAAATTTCAGCTTATAGTTTTATAAATCTTGATAACTCATA AGGCTTCTTTGGCGAAAACTACAAACCGAAAGTAAAAAGTCTACATTTTT AAATCACGAGTTAAATTCAACATTTTACCTACAGTACAGatttaacaaaa tttgaaacatattatttcaaatttgaagtAAAACAATCAAGAAATAACAA CAATGGGTGTGCGCGAATTTTCAATCATGTTGGATTCGAACCGTCAAGTG TTCTATCCTGGTGAAACAGTAACAGGAAATGTCATTTTAGATTTACAAGG ACAAATGTCTATGAAGGGAATCACCATTGAATTTGAAGGTATGTTAACTC AACTTTTTATCCGATGTTTTGGTATAAGAATATTCCGATGCACTAAATGG AATTAATTATTAGCACAGTTCTCTACAGATTTCGCTTGTCATCCCTATAA TATTGAAATCTCTTAGCAATCTCCCCTGCGTCTCTTAAATCCACAATGTT TTGAACTTAAGGTTCGCAAAGGTGACTCAAAACTCAGAAATTAGAATTGT GAAACAGACTTTATATGCATACCATTTTTTGTGGTCAAAAAATAAAGTGC TTTCTCGAGTGTATTTTAGCCTAttctagacgtcacccgcgttttttcta cgcgattaacgtctattccactatgcgacttttttgaatgtttgaagCCC AGGTTTTTgggtagcctatactagacgtcacccgcaagatgaaaaatccc ggtttttagtgaggtgctcgctaggtTTTCGGGCTGCAaacattttttga cgtcacttttaacttgtGAATCCCTAGACGATCCTAttgtctacacaaga tcactaaaaaagggaatagtttaggagaggcgtgataaattcgggtggag taagcagtggcggagatgtttacagtgttccaaaactctagcgccacttt tttcccgtaaaccgccctgacgcccgaattttttcccgcgtttaactgac ctttaaacggacgatagcatcgtctagtgaATCCCTTGCAGTATAAAaga atcgaatttgcgtcaaagcacttgaaaggtttcgtttttcagaaaatcgt caaagtggaactcactaagaaacgagatgaaaaatcccagtTTTTGGTGA GTTGCTCACTAATGCATTCTAGGCTTTAATTGAATTTAACATATTTGCAC ACGGtccttttgaaaatgtttaggGTCAGAAACCTAGACTGAAATTTGAC GCTTTTTTCGTGTCTTTGTGACTAAACCCTTTTTAGTTACAATCTCGACT TGACCAAGATAAGCAGACTAAACAAACAAATCGttaataaaatctaaatt tacATTTATAGTGGAGGAATGGCAGATTCTTCTGTCCCTTATTTctttaa gtattcaaaatattttaccaaTACCACTAGACAACCCTCCGATTCCCGAT ACTGCCCTCTAGCCCTCTTTCCTCGAAAATAATGTAGGGATTCATTTTTC AAGTTATGGAACAATCTGTAAATTTCATCAACCTCTAAAGGTATCATTTC CACATAATGTAGAATTAAGGCTTCCAACTTGAATACTGAGGGCTAATGTC TGTATGCTTCGTGTTTTATTATCAGGAAAGTCATTTTGCCATTGGACTGA ACAAACTTGGGAAGGGACTGGTGAAGACAGGCGTCAAGTTACCAAACACA TCGaagggaaagaaaaatatttcgaaaacaaaacgTGTTTATTTGGTGCC ATTTCTGGAGGACACACAAGGATCCATCCACACGGTCACTTCAAATATCC ATTTGTCTTTAACATTCCACAGAGTGTACCAAGCTCCTTTGAAGGAAGTC ATGGAAGAATCAGATTCGAATTGAAAGGTAGTTATTCCTGAACGTTAAAA TGACGTCTATCTTACATCCATAACGGGTATATAACGCTAGATgaaaatga acgttgaaacatgaaagctgaaaattttttctttcggCCTCAAATTGAAT TGCAGATGCCACCGAACAATTAACTAGCTTGattaaattttaaagaaata aattgTCCATGTTTTTCCCGTTAAACTACTATTTTAAATTTCCATACTTC CATATTCCATATTTCCTCAAATTATTtaaatttagattttcaacaGGCTC CTTAAATAAACTGATAATGCCTGATGGTTTCGTCTATAGTCACTCGTCTT GACCAAAATAGCAACAGACCTGTTCCATcttatctaaaatatttttgaat ctaTTTCTAGCCGAGATCGATATTCCAGGAAAACGAGACATCAAAACAAG ACGACCGATTACAATCAACGAAATTGTCGACACAAATAACCCAAATTATG GGCAATCTCCAAATGGCCGTTTAACAAAAGAAGTTGGCTGCCTCTGTTGG AAGGCTGGAAATCTAGATGTCGAAGGTTGGtataaaaaaattcagatttA AGATATCACGTCAAAAATCTTATGTCAGAAAACTTGAATAAACTTCCCTC TAAAGAATAATGCCATAACTACCAATGAACTGGTTTTAAGGAACAATGAA TGAAGTTATGAAGCCCCCTATGTACAATGTAGCCCCATCCCTATTCCTAT TTTCCTAGCCCCACTTTAAAGATCAATAGCTGGCAAAAGTTAGCAAAGTT CTTCAATACCattaatgttttcttttaaGGACATATTGATCGAAAGTGCT ATTGTCCAGGTGAATTAATTTTGGTCAATTCACAAGTGCAAAACCAAACC ACAAAGGATATGAAGGCATTAAAAGCGAAATTGTATCAAGATATTCTGTA CATTGCTGAAGGCCACAAACAGAAACGAGAAAACAAAGTAATTGTCAGAA TTGACGGTAAGTTGAAAACATTAgaaacaaactttaaaaatcTTATCAGG GTCTTTTTGATATCTGACAATTTGCTTTCGAACTGCAAAGTAGATCTTTC CCAAATCTCTGTTCGAAGTATGACGGAAAATGTACCattaaaaatttgaa gataAGACCAAATTATCCAACcaaatgaaaaacaaacaatatgTCATTGT ACAAATTCTTTCCACACCAAATtcatcttttcgaccgtagtcgcgcggac AGGCACGTGCTATTTGATTACTAAATTACCCCCTGAACTTTATCCAGTCC TTTTTACACCTTTCTCTTTCGTATTCATGTGGGAAAataaatagacgata tcgcgtttagataaatgcaatgcattctggtttctcggggaccctcaagg gaattataatctattccagatcattatataattgacattataattccttt gagagtccccgagaaaccagaatgcattgcatttatctaaacgcgatatc gtctattgatacaagtttagggtggtaaacaGAAAagtgcccgcgcggca attggcggctacggtcaaaaaggtgcaTTGTGGGTAATGACGGTATTGTA AAGGAAATCCGTTAAAAACACTATATCATTTACAAACTTTAGGACCACAA ATACCTCAAGGCAAGAATGAAACATGGAGTAACAGACCTTTGGCTATTCC AGCCTGTCCCCCATCTATTAGCAAATCATCGATAATCAAAGTCTCTTACA TGGTTCGTGTGGAGGTTGATGTCCCATGGGGAATCGATCCCAAGATTGAA ATGCCCATTATTTTGGGTACTGTACCATACAGAGGAACATATGGACAACC ACAACAATATGGGTTACCACAAGAACAAATGCCTGTGCCAGAAAATAGTA AGCATATTTGACATTTTAACTCGAACCCAACCCCTTTATAGCTAACTTTA TTATGATTCACAAAAAGTAGCACGTAGCTCTGGCAACGAGATTGATATTT TCATTGCCTCAAACACTAAGTAGGTAAGTCAAAACATGGAACTACAGAAA TATTCTGTCAAGCAATATATTTGCGGGTGCAAGCAAAATATTGGTGAGTT ACAACGATAGAGCACTCAAAATACATATTGAAAAATCGTCCTCGATACAC CATCAAAGCACAAAGCCAAAGGAGACTGGCTTACATTTTACCACAAAAGA ATGAAGTCATTGATGTTTCTTAAGacattttgacgtcaatcgtaCTTGAT AAACAGCCTCCTCAAAGTCTCTAAAGTTATGATTAAACTGGGGTAATAAT AAtgttcattttattttctctttagaCTTTTCAAACACACCTCAAATGCC ACCAGCACCATCAAATATGCTTGGTTACCCAGACATGGCTCCCCCTGCTT ATGCAGCAGCTGTTGGGAGTAGTCGAGTCAATGTTCATCAAGATGACAAC AGTGAATTAATGGGAAACTCTATGTACATCCCTGCTTACACATTTGCTGC ACCTTACAAGGTAAGTATTCTTTCCACTGGATAAAAGACCAAAAAAACTT GCCTATTGGAATAATTACTTTCAGAGATCTTATCACCATTtcggaaaaaa actttcagactCTCGATGACTGATTTAGATTTATCATGCAAACAACGAAT CGCTTAATATTCTAGCAGCCATAAAGTTGTATGCTTTACTTTATTCCCTA TACTGTCCATTGATGTAAGTTTCTCTGAACGAAGTGAGACAGGGATATTT GATAAGACGCAATTTTAAAAGCCGAAATCACGAGACTAACTATTTATTTA CTTTAGGGCTCTATGAAGATTGAACAGGGTAGCATGAACCCACAACAGCC AACAGCACCACCTGCAGGGTATCCCCCTCAACAGCCAGGTTACCCACCTG TCCAACCTGGCTACCCACCCACACAACCAGGCTACCCCCCACAACAACCT AATAACCTGATTGGTTTCGATGGCTCTGCTTATCCAGCTGCGCACCCTGG CTATCAACCACAACCTGGAATGGCTGCTGGACCATACTGAACCAATAGAA AATGAACAATATAATTGAGGTTACTTCTTAAGACCTTTACCTTTTAAAGG CAGTGATATGAGTTAATTTAACTTCAAAGTTGCTATTCGACTTGAATATG TAGTACGTGCTTAAAGTTaccaatcaaagattttgaggGGCAAAAAACAA cgtgtttttgaagaaatttcttttttcgttttACTTTTGTAACCTGAAGC TGGACCATAATTAAAGTATGACAGCTTACAATTTACGTTTAGCTTTCGTC GAAACGTTTGTAGATTTATAACGACAATGTCTTGTTTTCTCTGAATCTTA TTTTAAActtatacactttttttacaCACTTTAACTCTCTATACTAGctt ttactttcattttgaaTTCTTCTTGTATATAGTTTTTCTTTGCAGGGTTG AGATAAATATTTCCCTGTATATAATCAGATAATTCATCAAAATACTACCA ACATTGATTTTGCAAATAAATAGGAACAAATAATT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00054940TCONS_00054940Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00054940-proteinTCONS_00054940-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_247supercontigscaffold_247:73959..79643 +
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
ARRDC3arrestin domain-containing protein 3 Homo Sapiens
ARRDC2arrestin domain-containing protein 2 isoform 1 Homo Sapiens
ARRDC4arrestin domain-containing protein 4 Homo Sapiens
TXNIPthioredoxin-interacting protein Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.86 1.2 0.71 0.55 1.89 2.01 23.61 28.79 14.84 24.43 18.35 13.14 68.06 50.36 31.22 60.56 29.48 55.86 38.42 58.8 26.85 31.1 6.1 7.34 33.33 35.71 298.43 283.62 41.34 30.38