XLOC_034760 (gene) - C. hemisphaerica

Overview
NameXLOC_034760
Unique NameXLOC_034760
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_251:622376..633462+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_034760 ID=XLOC_034760|Name=XLOC_034760|organism=Clytia hemisphaerica|type=gene|length=11087bp|location=Sequence derived from alignment at scaffold_251:622376..633462+ (Clytia hemisphaerica)
GAGACTTTTGAAGAAGTTCTAAGCCAATGCACGACACGGGAATGCATAAA GCCTCTGAACGGAGATCAAGTACCAGTCTGTTTTGGCGGCGAAGGACAAG AAGGTCAATAAAGCTCTATGATAAACTGATCatcaaaattgaattgaatc aACCAAGTCTTGGAATCCTGGAATATCTCTGGAATCAAAAAGTATTTCTG AAAGAAATCGAAGATGAGTGGTACTCCATATATTGGCAGTAAGATAAGCC TAGTATCTAAGGCGAAAATTAGGTATGAAGGCTACTTGTACACCATCGAT CAAAATGAATCAACTGTTACACTGGCGAAAGGTAATTTCTTTTCTAGCAA CCGTATTGCTCGTCGAGAAATTCTAAATAGCATTGTTTTAGTCCAAGAAG ATACTTTTATCTCGATAGTTTAACAAATATAGCTCCTTTCATAATGACTG ATTTTTTAAACCACTTTAGACAGGGCACAGAAAAGGTTTGATACCCCAGT CAGTCTACGCCACTACCCCGATCAGGAAGATTCTTCTGAATGGGAAGATT CTTCTAAATGGGGAAAAAACTTCCCAAATGGGAAGAATTTACTTGTGTTT TTCTTCCTGTGTAGGAATATTCTTCCTCcgccagacggtactaatcgcaG GGCGGGATCGAATTGGCGTATCGCATTTCGCAATTTGCGatgcgtttttg gattacttacaagctaaaaattgaaaattgatgcaTTTTAGGATacaaaa tcatgcttatcaaaaaattgcgatgcactttctatcccttatttcgatgc ctgAATCGATAAATTCGAATATTaaagtaatcgataatgattGAAGTAAT CGTACAACCacttatcgattaacaatcgaatgTTGAGTaccaagatttca aaaaaattgtgagtaattgatcactttcttaacaacccttcaaGGACTTG ATAACCCGTTTGAGTACATTGATTGTTATTGATAACATTTGacaacttcg ataaccaattactatgatatatctttaaaaccaaaaaactgaCCTAAAAG ttaaaaccaaagcacaaaaagaagcccTGCACCATAAAGATTGACCCCCT TATTTCCCTGCCATTTTGTGTGCCCTCACCCTGGGTTTCCTCAAATAACT CACATCGGGCATTCTGATTGGTAGGAGAAAATGAAAGTGGTTTTTGCGTG TTTTAATTGGGCTCTTctagaaaaaatttgatatagGGGGTGGGCGACAg aaattttcagataaaaaaaacacTCGGAAGtccagtcaatttttcaaagt gcttcGAAAATTCTgcttaattttttatttgaacccttggaaattccaca taatttgtcaaaattttggaaaaagtatcagaaatttcagatttttccac caaaaaattgaccttgtattggaaatccaggaatttcaaaaaaacatttt gccttGAAGGCTGGAAAGTACTCAATGCAATCGAAGGTACATTCAATATG ATCGGAGGTAATCAAAAAGTAatcgaaatgattgaacaaatcgaaaatga tcgaagaaaatgccataatctgGAGTCATTGAGTATTCAATCACCGATAA AATCGATAGGTGGTCACTGACCACCTTCGATCGTTAgcgatcattattga ttacttcgatcacaatcgaacgttcgattagtaccgtctggtctTCCTCA TCAGGAAGTTGAAAAGTTACAGATTGTTTGTCAAAGCTGTATGATGGCAA TGATGGATGTGAAACTCTTGTTTACTGTAGTTGAAGGGGACttggaaagt tgaaaaatgagtTTGGGCAAGTTGCGCAGTTTTGTGAGTAAACACAAAGT TTTCCGTACCATTAGAAACAAATCCTTTACAATCTCATGCCGGTTATTCC AGGAAAAATAGGGGAAAGATTCCTGAACGACAGTACTTCGATagacaatt ttttcctcttggGGTCAATTATAGTTTAAATCATCCTCACTTATTCAAAT TCATCCTATTGGGAGATTGTTGAATGTAAACATTGATTTTCTGGaattaa aatacttttttaaaaatcaggTTTCAATATAATTATTCACTGCTATTTAA ACGGTTGTGGCTTCTTCACAATTGCAAAAGACACATCTGGACTTGTTTTG TAGTTGTCAGTCCCTTAGTTTGTACCGGGTGCgttacaaaaaagtttctc tctttaaaactagttttctagaaatctaaaaattttaaaagaaccattct aATTTCATTGGAAAGGAGAAAGATCAACTTAAatttcagggggggggtca acatttataatatcaacccatagcccaaaaacctgaattttgaccttttg agctaagttaacaccaccaccccaaaattggtatcgataccaacttgaaa atcataattttcagaaaaaggggggacccacccccttNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTCTTTCTTCAAc gaaacacaaaaaatgtcatatgctaaaatagaaaatgactgaaaactgac aatataataaaaacaaacccaattaagctagcaaaatcaatctgaatcaa tattatctgaatataattgatgtgcaaaaactaggagaagctattattag tacataattttagagcagaatagattcactcattaccaaatgctatcaca gaaaaaatgcttttgcttcaggcttgatccAAAATAAAACTTGGAAATAT CAAACAAGTCCAAAATAaacttattactcatttacagtcattatactcaa aagctaaaacaaatccaattgaaacctgtttagactgatatgtaccccgg ggtattttctagctataagggcaacaattaggaaagttttgctgtcattt tgatatggataccaactttctgaatcatattatttaaaaaaaggggtacc caccccctattttggtatcaataccAACTGAGGATAACTcttttttctaa aaagagggggacccacccccatcaataataacttgacttttcagactttt aaaggaaaaaaagacaccaccacccggctatgggtctggtatctggatgt tgacccccctGTAAATTTTGATGTGTAATTTAGTGGCCATCAACTttcga ttttcgaattttttaacggcatttgggTGTTAAGGCTCTGACCCCTCCCC CCCTCGACCTTAACGGCCATCAAAttctctaaagttaaaaaaattgtcaa aaatcaatgaaactctataaattttctccttcactttcattgttGTTTCG TCTGTCGTCAGCTACTTTAATTTCGCTACGGCTTAgctcagtttacattt taaaaataacggagataatttctaaacttttttccgaaagttgcgtgaat taattatctccgtagGCGTAATCATAATCAGTGGCGTAGCCAGGATTTTC AAGGGGTgtcgcaaatttcaattttcaaatgggcGGTTAGAGGGcggttg ttaatttcattagggCGGTGTTAAAATNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCGTTATGGGCTGCAGAT CCCAATACCTGTGAACCCCAAACACAGGCCACGTTGCACGTGGTTAACCG GCAACTCACCATTAGACGAGTTTGAGAATTTGTTGCATGGGTGGCAGAGC CACACTTTGGATCGAAAATATACAAAGAGTGAGTGTCTCGTTCGTAATAA TAGCTTGTGGTTTCTAAAAGAATGATATTGCCCtttgggaaattcctttt gtccTAGGGAAATTCCCGgataaacaaactctccgtcttacagtttatgc gctccttttgtaaaatataaaatgaaattctattgcaAAGTGTGCGgatg gagagtgaaggaaaaatttgttcatttttttcaaaaagttatgttatGTT CGTGTTATATAGAAAAGTCAACAAGAGAGAAATTCGTTTCTTaagtgata attttgtgatttgacataaaagtatttNACAAAAACCAATAACTGTCTAT CATCTATGGatctatccattacagtatcaatacaatatcatgtcatgcaa tccaatcagaatacagaactacagcataggatctgtacaagtactctctc ttatatattgccacatacgatagtcaatgttNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNCAAAAAAGGGTGTCGCTGAGTCTTCAGGAGCGACA CCCTAGTGACGCCACTGTCATAATCAAATAAATAGcggcatttcaaagaa aaaagatcaaacgtctgcgaaattcaagggccgcgCGGCCcgtctaaaca aaaggaacacgAGATATAAACATCgggtcgtttgttttggttaaaattat tctaaaaaatagcGAAGTGAATACTTTAGGTATGCGACTTTAGCAGATCT TAGTTGATAAAAGGAGGAAAAGAAATATGGAAAGTAACATTTGTATGGAA TAAACGTCTCAAAAATCGATATTTTCTCGTGAAAAGAATTGATATGTGGT GAGTTGACCCCTAAAGAGATTTTCGACCTTCCCTTAACGGCACATGgtcg accccctcccccccttaaCGGCAGTCAATGACCccttattaaatttgatt cattagataaaaaaatattagaaaaatatGAATCCCCTTAAAATTCAAGT AAAAAGTCAGTTGTAGCAAAAAGGCATAAGCAAAGGGACTTACAGTAACC GAGGGAACACCCAGAAAGTGCAAATAACAGCCGGTTGGTAATCACCGGAC ACTTTTTGGTTCCCAACAgtaaattttagtgaaaacttgAGATTGTCTAA AAATTGTAATGAGCACTTTTTTCCCCTACactgtttaatttttttatttg tttttcccTTATAATCATTAGCCTTAATCACATTAATTAAAACATTGTGG AAGACAAGTGCAATGTTTATGACTTGGTGTTTAAGCCCTATCGAGAGCTA TTATGTCACTCCCAGATCCCCAGCTTTTTTCTTGCTGTGCTCAAAATGTC ACAATTTGCTATTTGCAAAACTATTGACCAGATACATATGGCTGTATTTC CATCATGTCAAATCCTATGAAACTAAATTCCTTGGGtggaaatctttgtt ttctttgataaGGAGAGTCATTGAAGTtcgaactttcaaaacaaattttg gtCCCCATTCATGGTTAGTGAGATTAATACCACAGTATTGAAACTTGATT TTGCAgatcaaaatgatatttttaaaaggTAAAAATATGTACCACCAAAA CCCATAAATCATGGTAATAAAAATGCTAGTTATATTGTGATATTGTTGGC TCGTGAATGTAAACGGGGATAAAATTTTATGGATGCCCCATTTTGTTTAT TGATGTTTCTAAAATTGGTCTTTAAATTAATTGTTTTATAAAAAGCCATT TCTTGCAGGTTTATATCAGAATATCTTATTTATGATGGCTCTtctttcaa attaatttttatatCAGGGTTCAAATAAGAAAGATAGTTTCAGTGGGTTA ATAGCCTGTAAATCCTCACTTTTTAGGATTTTTCTAGATCATGTCGATTT TCGCTGTTTATACTTAGTGAATTGGAGATAAGCTATTGTAGTACATTCTG TCCATTTTTATTTGGATAGTTGTGATTTTTAGGTGAAATTCTTTGATTTC CACcatcaaaaacaatgaaataaagtgCTTGTAAAAGGTACACCTCACTT GATAGTTCTTTTATGTAAATCTTTAATGTTCTTATTATAGTCAAGTCTAT GGGAACTGAGGATAGATGTCCCAATGAACCAGTACCAGCACGTgaagaaa tatttgaatatATTGTCTTTCGTGGTCATGATATTGAAGACCTTCATGTC AGTGAAGCTCCAAAGAAACCACAACCAAAACAAATGAGCGACCCAGCGAT TGCACATGTAAgtagttttgttttgaatactAAATAATTTAACCAATATT ATGATATCAAAAGATCATATTGTTCAGTTTCACGTCTTTACGAGTCATTT TCTGGCTATTAAAAGACCGGTCCAATTTTCAGGTACCTAAAATTGCTGTG GGGTCACAAATATCACCAGACACATCCAGTAAATAATTCTGCAAAAACTT TTAGGACGTTTTAGGGTATTCAATTATTTGACCAATTTAGATCGGTTTGG GGATTCTTCACtcaatttactttttttgtcaTCAGTTATTTACTTGTCTA AATTGTTTGATAGATTGTTTGGGCAAAACTGTTGCGCATTAATTTTACTA CTGTGTTGCACAAATGACTTAAATATTGGGGGCACAAGAATCTTTTTtgt gttggtgcaatgcaacatgttCCATCCATCCAGCCCTTACAGCTGTTGTG TTTGGTGAAAAGAAAATAGACAGAGCCcgatatttgaaaatttgttttgg cAAAtctgggccaaaaagtgcctaaaataGGGCACACTTGCTTCATTAGT TCTTTCTGATATTTTCCTATAAGACCTGTCAAGACAGGccaaagttcttt aaaaagtggCTTGacctgttttgtttttttgcggCATTTTTTTTGGCAgt aaaaaatcagattttcttatttgtggaaattcccttttgtaattttaagg aaaataaagatttctcgcaatattttttctgatttttttggtttgcattT TCTTACTAATATTGTCATCTTTTCTATTTCCTTTTTACATCAGCCTTCCC ATttgctttcatttttttgtGAGCTTTCCTGAGCTTTCTCAAAATTGAAG ATATTGACTTGCTGTACAGCTTATATACATAAAGAACTTGTCATCATCTT TTTACAGAGTGGACCAATCCAGCAAACTCAAAACTTCTCAAATCCACCCA ATCAATACCAAAACTTCAATCAGTTTGGAGGAATGCCCAATCTTGTATAT CCACAATACCCGCCTTCACGCCAACCTGACCCTTCAATGAACAGACAAAC GCCACCTAATTTACCAAGGACACCTACTCCAGAACCTCTCAAACAAAGTA CAGGTGAAGAGCGCTCGTCAAATCAAGGAAGATCTCGAACTGACAGTAAC AGAAGTAGTGACAGAAAAAACAGTGTTGATAATAAGTCTAAAAATAATGA TCACCGTGATAATCGCCATGATAATCGTAATAGATATAACAATAGAGACA ATAGAAGAGACAATAATTCTCAGAATTATCGTGATAACAGAGACCCAGAA AGAAGAGACAACAGGAGAGATAACACAAGATACAATCGAGACAACCGTGA CAATAGGGATAATCGAGAGAACCGTGAAAATCGAGAGAGCCGTGAAAATC GTGACAACCGGGATAACCGCAGTAATGATCAAAGTAGAGACAAAAATAAC TACAATGACAGGAGACGTGGTATGTTGATCCATATAAATGTTTATTTtaa gtttcaaaaatattgcAATATTATATCTAAATCTAGTTTCCATAGATTGA GTATTTTAAATCGTGAAATATCTGTAAATGTGTTATGGAAAGATACTTTT TGGTTTTCGAAGTTTTAAGCTTTAAACTAAATTTCAGGTTCAGGCAGTCG AGGTCGTGGAACTCGTGGTGGTGCTGGTGGTAACAAAAACACAACTCGTG GTACACGTGAAAAGTTCACCGaagatttcaactttgaagaatcTAATGCA AAGTTCAACAAAGAAGAGATTGAAAAAGAGCTATTGAAAGTCTTAAACAA AGTCAAGATCGAAGATGATGTAAGTTTCTTCTAAGATTCTTTCACCAGCC CCTTTTGAAACTGTCAGTTGTTCAAGACATCAGTTTTGTGTCATCTTTAA TACTTATCAGCATAATGCAACTGGAGTTTATAGTGTTTTTTTGTTTCCAA GAAGAATTCTGAGGCTTTCTCGAACAGAGCCATCCCATGGAATCAGATAT TTGTTTAGTTTCACAAACTGTCCCTTCTGAACGTAAGAAAGGAcagaagt ttttcaaaaatttgatcgTTGTTTACCCTTTTCATAGCAGGAAAACATTC GCTCTCAAAGGGGTGACGAGATCTTAATTGTAAGTATTTCCagttatttt aaataaaattgttcttttttcaattcattttttcGTTAGGACGAAGTCGA AGACAAGGTCGAGGAAAAAGAAGTCAACGACAATGCTCCATTACCTTCAC CAGACAAATTTTATGATCGTTCCAAGTCCTTCTTTGACAACATCTCATGC GAAGCAATGGGACCAAAGCCTGCTGCACCACCACAGCCAAAACCTGAAGA GTAAGTTCGCCAGAGTTAATTAGCACATGTGTTGATTGAATTTGCCAACG ATACgattcttcatttttgaaacCTCCAGAAGCTTTGATAAATTAGGTCA CAAAGCAACGCCTGCCATGTTATGAAACGATTATCaaaatactattttct ttgaaacttcaaatctaCACCTAAGAATTCATGCTGGTAAAAAAGTCGTC ATAGCATATCATTAAAAAGCCATTTACTTTGCATAGTAGACACGTGTCCC GTTTAGTTTTCAATCGAACGCCGGATTGGAAGAAAAATCTATCACAATAT TTcgagaaatttttaacttttcttgcttggaaaaggttgacgaTATTCCT CTCTAACCCTTTTGGTTTGGTTTAGatgacaaaattttattttcaataaa cttttcaacattttgcaaattttaggggAGTAATGACTCGTCGCCAAGAA CGTGCATTGAACGTCGAGACCTTCGGATCACAAGCTGGATATTATCGACG TGGCGGATATCGTGGTCGTGGTGGTTATCGCGGACGTGGCCGAGGAAGGG GCCGAGGTGGTAACAACTTTCGCGGACGTGGTAATTACCGTGGCAATTCC AATCGCAACTGGGTAGATTACGATTTCGACTATGAAGCAGCTGGAATCAA GTCTCGAAATCCTGCACCCAAAACAGCAAGTAAGTGATTCTTTTGGTCTC GAAACCCACCCAAAACAGCAAGTAAGTGATTCTTTTGgttacacgttttc ttttcaatataatGTTTATAAGCaaatgcaggctcagttttttcctactt aaaaaaatgttctaGAATTCTAATTTCTAAGATTAACAGACCCTTTTTct cttaaaaaattatttgcaTTTTCAACGTTTTGTCTTGACCTTTTTGTTTT TACGTCaattacaaccaatcagctgttgggtccgtgatgttatgtcagaa gacattgcaatggtgcacaTCATGAATACTAGAAAATATGCGAATTCAAC TATTTTATTTCCCGCTTCAAGTCATTTGCATCTTCAACGTTTTATCCcga cgtttttgtttttgaaccCACTAATCAGACATACCAAGTAATATACGAAT TCAACTATTTTATTTTCAGCTACCTCGTAACTCCATCAAGGATATTTGCA ACGAATTTGTAAATAAATCGCATGTGACACTTCAGTTGCTTCAAGTTGCT ACCATTCTATTCTATTGAGTTTATTTTTCAAgcttaattattattattat tgttgcTGTTTTTATATCTATTCTCAATAACCCTCTACTTTGAGCGATCC AGCTTGCTATATCCAAACTCTAAGTGAGTGAACACTGTAAAAAATCGCTT AGTTCTTTCTAAATTTAAAACCTCTCAAATCATCTTCCAACCAAGTAATG TATTTATTAGCATATgagaatttttataaatttattgtttaatttttatt ctGGTTTGAACCTTTTCACCAATACTCGTGTTTTTATTAGAACTAATTCC GTTTTGACTGACTGAAAATAACTCGGTCTAACACTACATTAGCATGCCAG CTGTAACTTAAAGTAAGCCTTAATGCTGGTGCTATGTAATATAATACAAT TTTAATGattgtgttatttttttgtttagaaGTACTTGTATTTTCTATCG CTATTATAAACCAGAAGAATTTATTCCGAATTACATT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00055187TCONS_00055187Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00055187-proteinTCONS_00055187-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_251supercontigscaffold_251:622376..633462 +
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
LSM14Aprotein LSM14 homolog A isoform a Homo Sapiens
LSM14BPREDICTED: protein LSM14 homolog B isoform X1 Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
327.32 313.01 171.5 164.14 214.42 165.97 143.31 154.2 90.18 105 84.99 75.82 72.85 87.31 72.91 85.37 117.93 99.36 39.19 46.53 90.43 92.97 340.34 333.06 147.83 148.51 64.07 61.29 265.35 285.04