XLOC_035251 (gene) - C. hemisphaerica

Overview
NameXLOC_035251
Unique NameXLOC_035251
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_266:412247..417985-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_035251 ID=XLOC_035251|Name=XLOC_035251|organism=Clytia hemisphaerica|type=gene|length=5739bp|location=Sequence derived from alignment at scaffold_266:412247..417985- (Clytia hemisphaerica)
GACCCCTCCCATTTTTAGAACACACAAAAGATGTCATTGCAGTGTCGAAG CTCGAAAAAGAACTTGGTGATGCCGTTCCATTGTCAAAACAAAAACAAAC AAAAAACAAAATGGTTTGTGACTGCTAACAACGATTCGTCTTTTTCCAAC TTTTTCCTGAAAAATGGGGACAGAACCAGAACTGCTGCATCAGTCCGCTG TAGTTTTTCATGAACTAAACATAAAGAAGAATTATTCATTTGGTGAAGAT ATCTTAGCATCTTTCACTTTCAACAATTATCAAGCTTCCAAGGAGGATTT CATTGGAGTCTTTGATAACAAAGCAGAAGATACCTGCCATGAACCATTCG TTTCAAAGAAGATCTCTTCACTACCAGATGACCTTCCAACCACCATAGCT TTGAAAATTGATTTTGTTCTTGACGGTGGTGCCTTTGAATTGCGTTATAT AGGAAACGACAATCAGGTATAATTTTTTTGTGAAATATTCTGGATATTCT TAAAATATGAGTAATTATGTTGGTGCGTGCTGAACGAAATCAAAAAGATT TAAAACCTTAGCCCTGAAGTTTTACAGGTACCTAATGGGGCTCTGTAATT GCAAGGGGATGACATGAGTGGGGGACAATTGTCCGGGTTTTGTTCTATGA AAAAGGGGAGAAGAATCAGGATAAAAGGATGGATATGGACATGTTCATAA AACATAGGGCGAAATTTTAACACATTGAAAAATGGCTTTTTTACATTTTT ATCAATAACTTGGTAAGTATTGCAGTAATCTTGCTGAAAATTGGTGAAAA TGACGATAATGATGTAACAAAAAGGNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTACAAAATATCATCTA TTTACAATTGAAAAACCAAAGTCTTTTGTCTTGAAAAGAATGAGAGATAA ATCAGTAACAAATTAAAAAGCCATTTTTCAATGTGTTAAATTTCGCCCTA TGTTTTATGAACATGTCCATATAAAATTCAATGAATCAAATACAGAATAG GACTAATCAGACGGTTTGAAATTAAGGTCTAGGCCATAGGTCCAAATAAT CCGGTGTTCACAAGAAGGTTATGACTTAGAAGGGCTCTGAACATTGTTTT TGGTTCCTTGACACTTTTAACAAAAAACGACTTGTTTGGTAATATATGCT GTCAAGGGTAAATTAAGAAATTAATTACCAAAATGACGTTATGAACTTTA AAAAGACGTTAAAAAAAGGTCTATTTACCCTCTTTTACACAAAGTGCTAA GTTTCAATGGGTTTCTAAGTTGATTAGTGTCAAAGTTCACTGTTTTTCTA CGAAAAATTAGAATGAAAAACTGGTCAAAAACCACTATTTTGGAGATTTT GAGACAAAGAAGCCTTTACAAAAACTTTCCGAAAATCTATTTTTAGTTTT GTTAAAAATACACCATCTACTGTAACGCAAAAAAAAATTTCAAAACGTTT TTTCTTCGCCGAAAATAAGGTCCTCAAAGTTGAAATACTCTTCTTCGCAT ACCACAGTATTGTTGGTTACATCAGGTAGAAATAGAAATATTTATGTTGT ACATGACAAATACCAAAAATTCGCTATGGTCAGAGTCATCAAGGACTCAT ATGTTCAGATTTCAAATTGTCATACAAGACCTCAAAAATATAGTGCCTAT GAAGATTTCTTATAAATAAGATAGAATTGCTAATGCTACGGGAAAATAGT TTGGAAAGCCACATGAAGTCCTCTTTATCGTTTTTGATGGGTTTTCGACT GGTATAAGTCGTAACGGGTATTATATGTCTTTATATTATATAACTGTCTT TTCACTTAAAAAATCAACAATTTTTTTTTACAAACTTACTATTGTACATG CAGTAGAGTTTTCATAACTCCAGCAGCAAGAAAAAGAATCGATAAATCGA GTTAAAACAGGTTAAAAAGAGCGTTCTATCTAATTGCAGTGGTTTTCAAG ATAGCAAAATCTTCCCCTAATTTGCAATCAAGCTGAATAAAACAATACAT TAAACAGTCTTGTTTATACGGGGATATTGCTAGATTTAACTTTAGAAATG TCGGGCTAAGTGGTAAAACAAAGGTTTTTTAAAGACACTGCGTTCTGATT TTATACCCCACATTACTATTTTGCACGATTTTTTTCTTCAGGTTCTCGGA AAGTCAGCACCATTCAGCATCAGCGAGTCGATTGAAGTTCAAGAGAGTCT GATCGAAGTGCACGAGGGAATGTGGTCCGATGCAAGCCTCGTTCTCATCG ATAAAATCGATCCTAAATGTGACATCGGTGAATCGGCAAAGCCTTCAGAA TCGGTAGACGAAATCATTAAAGAGCTAGTTCCCAATCCAAATGAAGTTCA ATTAAGTGAAAGTGATTCATCCATCGAATCTGGCAACGTGCCCGAGAAAA CTGTTTCTTCTAAACTGGAATCAGAGAAAAGGAGGAGGTCGATAGCTGAA AACGCTCTCAAGGTTCTCATGCAATCTTTGAAACAACAAATGGGGTTCAT TGATCGGCAAACTCAAGAATTGAATGAAATGACTGTCAAATTTGGTCGAC ATGCCATGATTAATACTGATCTTCGCGAAGAGAATCTGGCTATCCAAGAC GAGAATGTGACTCTCCACGAGGGAATGTATGAAATGAAAGAAGAATACCA TGACTACCAAATGGACTATTGTAAAATCAAACGGCAAATGCGCCAAGACA ATGAACTCATTCATCACTTGAAAATCCAGATACTGGAAGATCGCCAAGAA CACCAGGATGAAATGTNCTCATTCATCACTTGAAAATTCAGATACTGGAA GATCGCCAAGAACATCAGGATGAAATGACAGAACTTCGTGATCATAGTAT CGAACAAATTGAACTCTTAGAAAGAAACACGATTCGTTTAGAACTTGCGT TGAATAAAGAACGAGCAGAGTTCAAGAAAACGTTGCTTGATAAAAAACAA AGCCAAACTGAAGTCACAGATTCTACAACTCAGAAAGGAATCGATGTCTC CGACTCGTCCACACAAAAACAAATCGATGTGTCCGATTCATCGACTCAAA AGCAAATCGATGTATCCGATTCATCGACTCAAAAACAAATCGATGTTACC GATTCGGGAACACAAAAACCGATCGAAGTTTCCGATTCTACCACCCAAAC TCAATTGAATGAATATACTTCCAAAATTGAAAAACTTGAGAAGAAGTTAC TGGAGCAAGCGAAAACACATGAAGAAATCATCGATCGATTAGAGAAAGAA TTGAAAAAAGGAAACGAAAGCAAAACAACCTTGTCACGTGAGTACGAGAG AACCATTCGAGAACTCGAAAGTCGCGTTGTTAACGAATCAACTAACGCAA GTCAAAAACAAAGTGATCTTGCTGTTGCTGAAAATCGTTTCAAAGAAGCC AGTAATGATATCCAATTCTTTCGTCAAAAATTTATTGAAACCGAACAGAA ATTGCAAGTCAATCAAATGCAGTTATCCAGAGCTATGGAGGAGTTGAATA TTGTTCAACGTCAAGCAGCCAGCTCATCTCACAGCAGATCTGGTGAAGGA ACTGATGGTGGAATGTCTTGTGTTTCTGATATCGATGATAACAGACCCCT CAACTGTGAATATTCTTGTGTTTCTGCATCGACGTCAGCTGAAAACATGA CTGTCGACCGACGCCGACGAGCCGGTGGTGAAACAACCGATTGTACCGAT GATGAATCAAGCTGGTATCACCAATCGGCTGGTCGATCGCAAAGCCAAGA ATCTCTTCCGTCCTCATACGGAAATAATAACAACCCATCAGATTATCAAT ACTTCCCTGCTGGTCTCATCCCCATCAAAAAGACCACTGATCCCGAAAGC AATGAACAACAAATCCAAGTTGTAGACACGCGACGTCCCGCTCGCCGACA ACGTCGAAAATATGGCAAACCAATCGATTTGACTCCATCTTCTTCACTTA CCACCGTTGCCATCCCTGATCGTGGTATGGTGAACCAACAACCTTTCACC ACAACACGCCCCAATTTCAACAAAAATGTCGCAGAAGTTGATCGAGTGAC ACTGGAAAAGCAATACTCTGCCATTCGCCAACACCGAAATTCGTTGATCC GCGAAAATACTTTCCTTAAGAACAAAATCCATGGATTGAAACAAGATTTA TTGTTTACTCAAAAGAACATGCAAAATTTCTCGTTAGAAGCTGAACACAA AATTGCAATGTTGTTGATGGCTTTGAACAATCAAGAATATGTTTCAACGC AAGACTTGAATGCCATTCTGCAGATGTTCCCTGTACCGAACAACCAGCAA GTGATTTACCCTCAAACCTGTCTCCAGCAACCACCTATTCCACACAACGA ACCTTCCACCACTCCACCAAACAACAAACTTCCCCAGAACAAAAATGGTT ACCTTTCACCGTACGCTCCTGAGTATCGACCTAATGCAACCAACAATGTC GTCAACTATCAGAATTTCGCCCCGGGTTCACCTCTTTTCATTCAGAACGA TCCCACAATGCAACAGCCCCACGTGGAATACAACCAACCAATGGCACAAC AGCAACCGGTGGAAGATGCGAATGGAAGTTACATTATGCAGATTCCTTCT CAGTTTCCAGAAACACCGTTACCGCAACAGCCAGTGGACGCTTCAAATCA ACTAGCCGCCATCGGTGTGCCTATTTCGAAAACTCTGTGATAACATGCTT AAGTTAAGGAAATGTCTAAAGAAAATCTAACTGGTTTAAATCCTGAGACA ACTCTTATTAAGCTTTGTCTTGATTTTGTGTCTTCTGAGAAACCAGTCTT TCCTTGTATTTCTTGATTGTATTGAGCCTTTCAATTATTAGGTTTTTCAA GTAATGAAAAGAACTTTCTAATTAATTTCTTCATAGGATAAGTTTGTTCA CGGAATAAAATTCCTATGTCTCACGGCAGTTCATTTTGGCTTTTGAATAA TTTTTTGAGTTATAGGGATAGTTAGGGTGATGTATTCATTTATCTAATTT TATTGTTTAATTTTTTATTTAGAAAAAAGGGTAAAACTTGACTAATAGAC AAGAAGATTTGATAACATTTGAAAGCGATCTGATCGTAAAGTAGAACCAC GTTCACACGCTATTGTTCCGTTTCGGTCCGAAATGAAATGAAGCGTATTA CATGACAACAAGTTGAATAGATCCTTAGAGTTTTGCTTTGCTTTTTATAA TTTGTTCCTTTTCTCCGCTCTATTCTGCTTACACACTGTAGAGCACCGAA ATTAAATTTATTTATTTTTCGATACATATTTATTTAGTTGAAAATCTAAA ATTTTAAAGAATTTTTAAATTGTAAATATTTTAAAATAATTTTAATTTAA CCTTCTAAGCATTTTTAAAACCCAAAAAACATTGTTGAC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00056025TCONS_00056025Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00056025-proteinTCONS_00056025-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_266supercontigscaffold_266:412247..417985 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.15 0.18 0.18 0.11 0.17 0.19 0.03 0.09 0.09 0.19 0.08 0.03 0.09 0.05 0.04 0.16 0.08 0.08 0 0.1 0 0.07 0.09 0.13 102.82 59.55 0.18 0.11 0.11 0.06