XLOC_035285 (gene) - C. hemisphaerica

Overview
NameXLOC_035285
Unique NameXLOC_035285
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_267:16927..25102+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_035285 ID=XLOC_035285|Name=XLOC_035285|organism=Clytia hemisphaerica|type=gene|length=8176bp|location=Sequence derived from alignment at scaffold_267:16927..25102+ (Clytia hemisphaerica)
TTCCCTTTAGACTTAGAAAAataataagcaaaaaatatgaaatctgCAAA ATGGCTGCTGGAAATTCTTGAGCAAGAAACTTTTCTTAAATATCATGCAT ATTACAAGGTAAGAGCTGCTGATTCTTTTCAAGCAATATTATTGTTGAAT TCCTgcaaattctcttttttttgtagACAATTTGCTAAAACAAATAATCT TATTTTACTAGAGCATTTTTGTTAGTATTTGATAAAATGTTTTCGAGGTG TCTTGAAATTTCCATGATTTTCTTTAATTCATCTTTAATAGGGTGTAAGA CACAACCATAAAGCTCAAGGCATCATTGCTTTTGCACGACTAAGCAATTC CAAAGAATTGACTGAGAAATATGTGAAAGTCGTTCAGTCATCGGTTGAAG TGTATAATGAAAACGATCCGCTTACTGAACAAGTAGAAATCGATCATCTT CAGGTAATGGATATAGACAACAGTTCATGAAATATTCAACCAGGCAATTT GCTTTTGAAATTTGTCTTCTAATTAGTAAATcctgaaaagaattttttct tgcttttcaTCTANCATATTATTGTTGAATTCCTTCCTgcaaattctctt ttttttgtagACAATTTGCTAAAACAAATAATCTTATTTTACTAGAGCAT TTTTGTTAGTATTCGATAAAATTTTTTCGATGtagttttgaaatttccat gaTTTGCTTTAATTCATCTTTAATAGGGTGTAAGACACAACCATAAAGCT CAAGGCATCATTGCTTTTGCACGACTAAGCAATTCCAAAGAATTGACAGA GAAATATGTGAAAGTCGTTCAGTCATCGGTTGAAGTGTATAATGAAAATG ATCCGCTTACTGAACAAGTAGAAATCGATCATCTTCAGGTAATGGGTATA GACAACAGTTCATGAAATATTCAATCAGGCAACATTCCATAAAACACTTT GGAAATTTGTCTTCTTATTAGTAAACcctgaaaaaaattcattttacttT TCTTACTTTTCATCTACCTTTAAAGGGAGAATGTTATCCGTAAAGCTATA CTTTGAGACAACATACGATGTCGCCAAAATGTAAACACCATTTTTgaata caaatttccaaaaataattggCATAACTTTTAACATCAGactgtctttgt gcaaaattttcgCAAAAAGTTGTATTTCAATGTGATGCTTGAGATATGAA AGGACTAATGTCATACCtcaattaaaatcttaagaaatcCATTCCTATTt cagaaagttcttataattaacACTATATCCAGCTATATCCCCTCACTTGT AATAAAAGAAAGCCAGCTGATAAAAAGTAAATAGTACGCGTCTCacatat tttctctcttttcaaccaatcagaaaagttttttatttagttttgatTGT TTCGAATTATTGCTTTAAGGAGAATGATCTCCCTGGGATGGGAGCCATTT TATTCCACCTTTAACCCAATTagcccaagggggggggggtagaatctacc acgcttgAGTTCTTTTGTGTaaatctcggagaaaaattttttaagcgACT cgaaacttttaataaaatcttattaagagtacttgtgcaattTTCTAGGG TCATAGGTCGTCcggatcaggttttatgactctattgtgaaacatgacat aaaaccccaGGTAACATCATAAAAACTAATCAGCTTTTTATTCCTTCCTG GAAGTTTTTGTCACGATGGAAAACATCTTTACCAattttcatggccatag ctcttctataaaatataaacgagggtggtagattcaaccttggggctaat agggttagtCAAAATATTACATCAAAAGTCCACCCCCATTTTCAAGTATC TATCTTAGTATTCAGTCTTTGACAATATTCTTAATCTGAAAATGTTCAAC ATTATGATATAAATacattctgaaatatttttagagTGACAACATTGAAG ATTATCGTGGTAAGAATCAAGGCTACTACAAACTGTTATCACATTACATG AATTtgcatcaaaacaaatataatGGTAACATTATGGATACCATCAAAGG TATATATCATTGATATTGAtattaaaaatctcaaaatactTCTTTTGACT ATCTAAGATCAGAGATATGCACGGATGCTTGCGTGATTATTTTGATCAAA AGAAGATGagattatttttatttgttatttGTGGTAGATATAAGTTGACC TACAATTCTGGACATAAATATTTGTCCCCTTACACCCATCATAGTGTGCA CTCCCCCAGAATAGTGGGGGGGGGTTTGGTGTTTTGGGTCGACAATTTCT AGgtgggatttggaaattttcaggttttaggtgggacaaacaagttaagg tggggattaatttctttaggtggaattttttatgttagatttttcttact ttcaatTTAATTATagtattttctgaattttatattctataaataattct tttactTTACTAAACctttctcctttttattattatactGTAAGTTTTGT TTCgttcctcgaattagtataatTTTTCGTGGGAATAGCATTTTTAGCTG GGAACTATTTATACTCTGATTTGATCCCTCGAAAAAAGGCATTTTTTATT TGTGATGAACGTCAACTAACGTTAAATCTTACTGTTCGCTATCAAAAAGA ATGAAACAAAGTGCTGCTCAAAACACGGGCTGTTGAAGCTTCTTCCCATA TGGTAGTGGACGGGCTATATTTGATgcattattattttttgcaatTAGCT TTTCTTTGATTCagtcaataaaaaaatgtaagcaAATACTCACAGTAAAG CAGGTGTATTATTTCTGCTGCCCAAATGAATACATTACCCAAAGTAAATT GTATACTTTGTATGTGTAAACAGACGACAAACAACCAAACAAACAAATCA TTTGTGATAAAGTTGAAGTAAATGAGCAGTGAGTTTCAGTCATTAACAAA CAAGTTTAACACCATGAAGTCTTTGGCAGTATTAATTTGCTTAGCACTAG CGTTGGGTTCATCCCACCAACAGCCCACTGGTTGTTTCCCAACCAATTGG AACCATCGATGGGTCAGAGTCAACGCTAATCTCTGGTTAACACAACTTGA TACGCGTAGACCATGGCATGAGCAAGCGATGAAATGCCAAAGCATTGAAC CAGGGAACAAGACAAATTTCGCCAGAGCTGACACCAAGGAAGTTCAATCT GTCATGTCGCATCGATTCGATAATGATGTTTGGATTGGTGGATTCGAAGT TGGCAACTCAGGAGCGTGGTATTGGTTTGGTCGAGGAGCTCATCTATGTG AAACACAAAGAGTTACTGGAAGTTACTGGTCAGCTGTGGCCAAACCAGAT GCTGGTCAACATTCAGATTGGCATTGTATGTTGAGTCGTAACTATGGCAG TGTGAAAGGATGGTATTACGCTTCTTGTACGAACCCCAAAAAAGCTGTCT GTGAACTGAGATGttaaaaagttatgactgtttgaATCAGCTTCAACAAT TGTATTGTTACATTGCTTGTATCATTCTTATCATTTATGAtttgtttctt ttaaaaagaattttcaagtaATAATATCTTCTGCTATTTTTACCGTTTGA GAAGGATTAtaagcaaaattttttaaagctttggTCAGTTACATTTTGAT GAAGATCTAGGGCTTTcttaaaaatggataaaaatttctaaattttcggc AAAAGCCAGGGGAAACGGTAGCGCTTCTTCTGGAATTGCACAATAAAAGc atggttgttttttcatgtATCAACTCAGAGGGTTTGGGTTTCCTGAGAAC TtgaattaagttttttttagaGATATCCCCGACTCTGGAGCCATTTTTta tgttaaaagttttttgaaatcaaaagatAACTTGTATTAACTAAAAGACG TACTTACTGTTGGGAAGAATGTATTTTTTGGCTGACAATTCTTGATAAAG AGAAACGGGCAATGTCAGTAAAAGAGGCAATGTCAGTAAAATGTATGCAA ACTTAATGCACCGTCTTATTTAtggtaaatttaaaaaatgaactgACAGA AAAGAATGAAACAGTCCCTCAATATAAGGGGAAGGGGTTTTACAAGCATG TGTTTCTATATTTATGTCCCGGATTGTAGTAGGGGCCGTCCACGTACACA CTAAGGGGGTAGGGGGTGTCTtgtcaaaagcgtatgcttgcaaACAGGGG AGGGGAGGGTCGAAAGAAAATGTACGtacacaaaagaatttttttacagc CCCTTTTTTGCATGTAAAATTCTGCGAAAGAGATGAAGAGTGAATTGTTG TCCTGTTCTCGCGAAATAATAAGCGACCTCTATAaagaaaggttgttttt ttgaTAACTCATCCTcaatgcaaaaaataaaaacttaagtTTCCTATTTG AAATATAGGACCGAACTAGACAATTTTTTTGCTGGTGATAGAGGGATGAA AGTTTAAAGTACGTACCAAGAAGGGGGTATAGGCGGATATGCGTGCGCTT GCGTACACGGGAAGAGGGGTACTCGATTATTGACAAATTTATAAACAAGT ACTAAACTCTTGAAAATAATGAgctaaaaacagcaaaaatggGATAATAA TAAGTTGGAATGGCGCCAACTCCttcttattttttggatttcagatAAAG CGTATGTAATCTTTCTATAGTATATGGACTTGTTTAATCGCATGGTTTCT TGCATCTTGGATTTAGACCTTTTTAAAACATAATGTAAAATTTGTTGGAC CTCGGGtccttttttgtaaaatattgatTGGAATTAGGTATATATTTTTG AGCGTTTTGACACATCAAGAAGCCGGTCGTCGAGATTAAGGTTTAAGTAT TTTGCGTTCTCAGGTACGTGCCCACCTATCGTGGATGGACCATTGTATTC TGCTTTCCATGGTTTCATACAGATGGGGTATGGTCTTGCAGTAGGATCAG ACCAAGCTGTTGTGGAGGGTATCACCATCATAGACCAACAATACTCCCCT CTCTATGGAAACGACATGAACAACCCTAAGGTAGCTTTATTCTTTTTTCA GAGCCGTGTGATTTAATTTCTcttatgatttttgttttgttgtaaaaata ttttgtttgaattgtaaaaacgttgattgtTGGGAAATGCGAGGCTAGCC TATAAAACATTGAGAGCCCGAACGGTTGCTTTGAGAAGAACACGGAGTGT CAGGACAGACTTGGctaaaagtcataaaaatgaATGAACATTATTTTATC TCACGCATTTGTAGAGATTAGACCTTTCACAATTTGGGTACGGGAAGACA AGTTTAGAAGACACCTTGAAAGTGTTGCAAGACGAGAAGCTCGTTCAACA AGtacaagaagaaaacaaaaaagatcgCGATTTCAGGTGAGCATTGGAAA TTTCCCTCGGTGAAACTCACTAAAAACTACatataaaattgtattttagc tctagtttagacggcccacttttcgccctgcctattctaattgtgaatta aagtggacataaagtgggctgtctaaaatcaatgcattgccctcttttga cgtcaatgcaatgtcttctttcaatcttttcaaaGCAAAGATTTCAACTA TCAACTTTGCGCCCACTTTTCGCCTATtaaaacaattagaataggcaggg cagaaagtcggccctctaaactagagcttagttCTGACGAGGTACTCGCT GGCGTTTTCATACTCCTAAGTGGTATCACTCCGCCGGTTGGAACCTTTCT GGTAGTCTGAATACTAAGAATTGCTCCGCACCGTCtcttttttgaattga atttgacccttttttctgtTCTTCATACTAGAAAAGAAACGCACATGTTT GGAATCTATGGCTGGGCGTCACCACGTTACCATAGCGATTTGATGATGGA TTTGACCAACAATCTCCAATTGCCAGAATGGTTCAAACCAGCTGCCCGAG ATATCAGTCAGGTTTGTTTTGTTCGTGTTATCATTAAAAACttacataga agagttttataGCTACTCGAATGTTTATGGACAAGACTTCACTACAAATG GTTTGATAGTTTACATAAACTATTGTTTTCTATGTCAGTTCTAAACATAG TAGTATGTCTTCTAAAACTCTATAAATGGATgtataaatttcttttcttt tgtgcTCCTTCTAgaatttagataaaaaattcattttgataTACATCTAA TATTTGGCGTGCTGGGACTGCCTCCGTGCAAAACTTGTGTAGTATATATC TAAAATGTAATATTCGGCGTGCCTTGACTAAATAGAGACTCTTATGATTA AACTGAAAGGAAACCCGACAATAAAAATTGTCAACTTTTCGTATGTGAAC CATAGTTCATAATTGGTCAAATATGCTCAACAGGTACCCCTTTTTAGGTT AACTTCCATTTAGTCTTTAAAATCTACCACAAACCCTATTGTAGATCGGG AGATGTATGGATTGGTTGATGGACATTGCAACGAAAACGTACGTGGAAGC CAACAGAACAAATGATTTCTTCCTTTTGCACGGTGTCACAAGTAAGAATG CTCTACTTTCCTTGAGTATTTTCAAGTATTGTCTCCTACTTCTATATTGA ACGTGATAGGTGTCGTCCGTTAAAACCGTCTTGCTGCCTACCAGCTTGTG ATCCCGACACAATCCGATTCAATTTTTCGATCAAGTGCGTTAATCTTGGC GTGAACCACTCGGGAACAAGACCTGGCAACTTTCATCTCATCCATGGTGT ATTGTGGAATCGATCCCTGTCACAGTCACTAACTGGCTTCTTGAGTTTCT GTCTCCCAAATACCCCTATGTAGGTTAGCCTGGGTGAAGATATGTTCACT TGTCAAGTGAATCACAGCACCAAGTGGGAATCAAACATGACCGCTTAGAT GAAACATAACTTTTAAATCTATTGTATACCAATAATTGTAGAGAAGTGTC TCTAAATTAATGCTGGCAATGCTGATCCATTTGCAGATCCGCTGCTATTT AGTGGTTGATTGCTTCAACTTCCTTTCCAGGTACCTGGTCAGCTCGGCAA GTTCTCCCTCTCCTCAATTACGATGACGCACTCCTTGGTTTGCGTGGCAT GGTGAGCGGTATCTTGATGACCTACCTCGAACAAGGAGCTCCACTTTTAG GCGAGTTTTACGAGAGAGAACAATCTTATCATTGTGGTGATCAATGTGtt tgaatctaaaaaaaatttccattgtCTGTCTGAAGCTGTAAGAAACTTCC TGAGTTTTACAACCTTAAATGTACGATTCTGCTTCTACCTCGACCCTTTG CagaaatttcaattattttcaaatcattcATTCTAGGAAAGAAGCCATCA GATTTCTACGACGGGAGTGATGTCACACAAGACCATTGGGATGCATTGTT GAAAGATGTGACAAACGTTGATCAAGTGGTCTATGAACAACACGTTTACA AGGTACGTTGCAAATCACGTTTGAAGacgattttaatgattttagttCTG AGGACATTCTCACCATAAGCGAGGCTAAAATTTTCGGGCTAAGAAAATAC CAGATTTGGCTGAGTTATGAACTCGGTACGAGTTTTTTGCTACTACTACG ATGTTGGTAATTTGAGTTTAGTGCTGTTCGAGGGGTTCAAAACATAAACT ATTTGTTAAAACAATTTTAATTATTGAAGGCGTAGaagatatatttttga aaaaagcaacTCTAAAAGTAACTCCTCTCATTATTTTAGTTGGTGCAATG TTTATACGAGAGATGGCAAGAGAATCCCTCCAGTGAATTCGCCAAACATC AGTACGCTGGTGCTCTTCATATCACAAAACAAAGTTATTTTCAAGCTGGT TTATCCAACATTCACGTCAACTAGGATTGCACCATTTCTTAATAGAAAAT GCATTACACCATTGAGATTTTCCGCTAAttcacgtttttttaagaattta tgattgaatttgttttgttacatttttatctttgaatgaatttttatcTT ATATACACTAGTTAGTAACTACACATTGTAGCCTAACGGTATCTTATGCA TGTAATTACATATTTTAGAACtttatttatgaaattttgcacattatTAA ATTTTTGTAGGAATTTTTTGTAGAGAATAATTAATTTCAATGGACTGAAG ATCTCAGATAAAGTTTTGATCAACTC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00056062TCONS_00056062Clytia hemisphaericatranscript
TCONS_00056063TCONS_00056063Clytia hemisphaericatranscript
TCONS_00056064TCONS_00056064Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00056062-proteinTCONS_00056062-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_267supercontigscaffold_267:16927..25102 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
83.74 75.3 24.93 19.46 52.19 42.21 97.04 99.32 95.47 116.95 77.92 54.27 70.56 61.2 51.51 64.02 110.2 113.43 38.38 52.1 54.68 55.23 70.15 63.51 35.3 37.48 51.11 29.86 61.59 58.99