XLOC_035350 (gene) - C. hemisphaerica

Overview
NameXLOC_035350
Unique NameXLOC_035350
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_268:103111..111256+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_035350 ID=XLOC_035350|Name=XLOC_035350|organism=Clytia hemisphaerica|type=gene|length=8146bp|location=Sequence derived from alignment at scaffold_268:103111..111256+ (Clytia hemisphaerica)
GACAATAGTTTTTATTTCTTCCACCAGCACTGTAGTCAAAGCAAGCTACG AATTACAATCTCTGATAAATACTTTGTGGAAAGAAGACACCAACCGATTA GTCTTTGGTAAAGACATTCGTTTGAATTACCAAAACCAAGCTTCATGGTC GACAGCCAGAGATGTTTCATACAAACCATTGTTTTATTCGGTCAACACTA ACGTGTTCAGTAAACCAACGTTTAGAGGTAATTTATTTAACATTCGACAA TACATTTTACAAAAATGTGAGATTTGTTAGAACCTAGAGTAGGGAGAGGG ATTTTTCCCCACTTTCAAGGCATTATGCACCACTCATAATTAACTAAAAT GATCGCACATTCACTCTTGAAAGGAGGTATTTTTAAGTCTATTCCAGAAA TTTCGAAAGAtgatttcaaagaattttgctAACATTTTAAATCCCCCTTC CTAGATTAACCTCCcctctttttgaaaacttcGCCCCTCCTGCGATTTTC AGGACATCTCTACCCAGGGAGGAGGTTTCGAACTATGATGATGACATATT ATTGACTCCCACTAGGTAGAGGGTTTCTACCCTGATAAACTCAAACCCAT CCTACTAGTATGTTTACGTTTTAAACGATGcatcatttttggacctacct ggaggtcctataaattaacctttgtccgtccgttcgttcgtccgtccgtc tgttaccagcttttctcgggattggctcattaattttttctgatttttgg cacaaagatgcaaaacggcaatgcccaaaatgtgacagagcccgattttt gaaaaaaaataaattttccagccgccggaaaaactggttttttggcattt tctcgagattttatcattagtgttttctgattttatgctcaaagatgcgt attagcaatgcccaaaacatggctgagtccgatttttgaaaaaaaaaatt ttcctgccgaaaatgccagaaatatgccggagatcgccgtttttctggat tttcattggacattttccttataattggttgtttgttcattaaaaaatat tattaatagTAATGCCCATCATCAAGCATGtctcaattttcaataaaatt gatttttgaagccggaactatttaaaaatcgcctgaacaacctattttcg ccggaaagacagtatttcttgaatttctcgatctgtactttatatttttt tatgaaattttgcacactgatgcaaaatgacaatacctaaaatgtgacgg agcccgatttttgaaaaatatttttttcggccgaaaatgccggaaatata ccagaaaaaccggtttttttatattttttcgaattttaatccttagtttt ttcagattttttgcagaaagatgcgtattcgcaatgctcaaaacatgacc gagttcgattttttgagaattttttttctcgaaatttccgtttttgcaga ttttcattggactttttcctaacatttctttgttttttctcaacaaaaaa aaaacatcgtTGATGCAattcccaccatcaagcatgattcgattgtcaat aaaactgatttccgcaaccggaactttctatttcttttttcccttctccc cttccctctccccgtcaacaatcaatgatgaaatttaacgcATTATGCCT TTTCGCTAAACATTATATTTTCTAACGGATTGTTTaccgtttttctcctt attgctatctaactttcatcatcaggtaggtccattcagcatctagcttg tctttctttttttcagcatTCATTGCCTTATTGGACAATTATGAATCAGA CACGTACAGCAGAGAATCTGTCCCAACATCAGAAATCAACGAAAATTATC ATTTCTTGAATGAAGTATTGAAAACAAATGCTATGAAGAAAGTTCACGAG TATTTGAGACGAAAGAACAAAGCTCCTTACTCTTCTAGTCAATTTAAGTC AGCTTTATATGACTTGTGGTTCCAAATGTACTATCGATCAAGGTAATGGG TTTCAAGAGAATTGAATTCTAAATCTCTTTAACTACTCAATTTAgcttac ttttttttaaatattactGTTTTACTACTACACatgactctctaattcga tctgcAAAGGATCAATAATTCTCTTCGAACTAAAGAAAGGGTCGAATTAT AAACGAATTTCCATCTGAGGGGAATGCTTCAGTGCTTCAGTTCGAGTTAC AgggatttgataaaaaaaggttGACTAAACTTtcattttccataaaaaaa aacaaagaaaatatttgactcgatattcaaaatttatatAATCTACTACT TTTTGCTACTGTCCACTAACGACTCCCAGCCGggacacaacgtcaaaaca acgtccatgtgacattaataacgtccaaataacgttatttgaacgttaaa ataacgttgtgtgccagctgggctatACAGtccttttttgctcagttttc CTACCACGATTCCATAATGAACAGTATGTACACAAACATTTTTCTGTGGC TTTCAGCGTTCGTGGTTCAAGTGGTTTTGAACACGTGTTTGTTGGAGAAA CAAAATCTGATGGACAAGTATCTGGATTTCATAACTGGATTCAATTTTAC TTGGAAGAGAAAAATCGCAATTTGAATTATTATGGATATCTCAAGAAAAG TAGCTCGGTAAGAAAATACTTTGTCGACTGCTTATTATAGAAATAGCAGT ATCTGCCGCTATAGGAGACGATAGATTCTCGGTTATTCGAAACcctgttg tgcgcagatttgtaatactttctgcgcagatttgtaatacctgcgcagat ttgtaataaactttgcgcaaatttgtaatacttgagctgcgcagaaatgt aatacttctctgcgcagatttgtaataccagcgcagatttgtaataccag cgcagatttgtaatacctgcgcagatttggaataaactttgcgcaaattt gtaatacttgagctgcgcagaaatgtaatacttctctgcgcagatttgta atttggaattgatattttcattggtaACTAAATTCTATTCTGcgcagggg ggggtcaagcagttagtacaagacatcatgcctactgagtgattctttgg aggaaagaggccacaccaccaccctttgacAGTTAGTATGAAATATACTA AATGATTTCAAAGGAAATTCACTAAGGAccaccccttaaaacctatcAAA CGAGAGtgtgatatttactttttgtcAAACCATGTtcccaaaattgtttt gaaacagTTGGTATGATGAattaaaatgaatcaaaaattttattttaaca caaCGCTGTACAGCGACATATGTACAAGAGTTTCAAATAACGAAGTACTT CTCAATTGATACAATAATGAAACACCGTAaaccaaaaacataaacataat aTGTAGCGTTCAATCAAGGCAGANNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNACAATTTCAAAATCGATCTAAGTCAAGAAAATAGTAGCTTCAATGTTC TACAGATTTAACTTAGCTTATCAAATCTAAACAGATAAAAAGGACAATTT CAGCGTCACTACTTTTTGTAAGTTTCATATAAATTGTTTTATAAACTACA TTATACGATTTCAAAATATATGAACTCCCATACACGCcgtaaaactaaaa gaaaaaagtaaaaccaAAATAATTGTGTCTTGGATTTTAAAATTGTAGGC ATCCTTAGGATTATGCAATCAACTTCTTAGTTTTTGGAAAACCATCCATG CATTGATTTCCCTGATTGCttttagtatttatttttaatatttttctaga aaaggtaaaaaagtaGCACTTAGTATTCATTTGTACTAACTGTTTTCCTA GATTTTTTACNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNCTAACTGTTTTCCTAGATTTTTTACTTGACACCACC CTAGCAGTCACTTAGTACCATcaagtactaactgatttttgaaaattttg taggtataccaccacggtactcaccggcatgatgtcttgtactaactgct tgacccccccctgttcTGCGaacaaaatgcattaaaaaagacttagaaaa taataCCCAAATAAAGTTGTGATTATTGAGTACATCgaataaataatcaa ttaatatttcttttctaagcagtgcttttataagaaatttatctgGTAAT ATGAATATTGTTTATGAGAATAGcgcggaaataattttttgtaagaactg cttttataagaaactaatcaataactcgtaaaataaaaattatttctcgt cggtaattgtttatttcgaagtaaacaaggtacgaagaataacatgaaca tatttattttttataagcactgcttttataagaaactaaccaataactcg taaaacaaaaattatttcttgtcggtaattgtttatttcgaagtaaacaa ggtacgaagaataacatgaacatatttatttttataagcactttgttatg aaaaacaattaatgatataaaaatatttttgtcaacattttatcatttca agaggtacttaaagtctattcacgataagtgtgcactcttttttcattta cctataacttttgaaggaattcttcaatctttacaaatttggtatcattg gaaagatattagtgaatggaacaatttgaaataaaaaaatctttaaataa attctaaaaacgaagatgaaaatgaagaagaaaaaaatgaagatcttgta caaaggtgctataactatcattttcactgaagtgaatccttgattatcgt acattatcactgtgaaaaaatttctcaaaaataatcattcaatcaataga tatcaagcaaagttataagctgattgacgtctaaaaacgctgttttctgc tgttttttggggtcaaccacttattaactttgaataaatattttagtaaa atttctttacagtgatgatctcctaagattaaagaatctctccagtgatt atgaaagttatagcacttttctacaagatcttcatttttttcttcttcat tttcatcttcgtttttagaatttttttaaagatttttttatttcaaattg ttccactcacaaNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNccctccaacgataccaaatttttaaagat tgaagaattccttcaaaagttataggtaaaagaaaaaagagtgcacactt atcgtgaacagactttagtaccAAAATTGATGAACAATTTATAAGATGAT ATGATGAGAAAATACTGATTTGCTCTAAAACCACCTTCTACCTAGCTAGG AAACCTGTCCCCTCTGACTGGATTTCTTTTATAACCTTTCATAGCCCCTG CATTACATTACAGCAAGATATCTcaagtaaaattattttgagttaaCTTT CTTTCAATAAGAGTTTTATTTGATGGTTGAAGCTTCggtatgttttttgt tgttgttagatagaaaaaatacataaagatgaaaaagaaaattattggaa caatttccattagattaaaagatattgattcgtttcttataaagttgatg cttataagaaaaatgacaatattgaaattactcaaaatcccatgtttgta ttgattcgtttcttataaagttgatgcttataagaaaaatgacaaTATTG AAGTTACTCAAAATCCcatgtattgaaagaaccaactgccaaaagccaat tttcattagattaaaatatattgatttgtttcttataaagttgatgctta taagaaaaatgaaaatatcgaaattgttcaaaatcccatgtttgtattga ttcgtttcttataaagttgatgcttataagaaaaatgaaaatatcgaaat tgttcaaaatcccatgtttgtattgaaagaaccaactgccgaaagccaat ttccattagattcaaagatattgattcgtttcttataaagttgatgctta taagaaaaatgaaaatgcttaaaattattcccaatccatgtttgtattga atgaagcaactgccaaaagccaattttcattagattaaaatatattgatt cgtttcttataaaactAATGTTCATACTAAAGATATACAACCTTTGTCTT CGTGGGAAACATAGGCCCTCgaagtaaaaatctaaattccaaattacaaa tctaaaatttattacaaatctgcgcaggtattacaaatctgcgcagaaag tattacaaatctgcgcaggtattacaaatctgcgcaagtattacaaatct gcgcacaacaaaCCCCACTGACTCGAAAATTTTGGTTGTTCGTGGCTCCC CCCTTTGGATTTGCTTATTCAAAATTCCATTGGTTATCGGAAGTtaaagt tatttcaaaatttcataattttaagcatttttgcaaaatttttgctCGTT ATTTTAATTTGATTGTGAAAATCAACCACAAGGAGCATTTAAATTGAATT TTCGGCAGAAATAACTTTTTCTGACATTTCGCACTGTTTGTTTTTCAAAG TGAATCcctaccccccccctgggacGTTGGATATCATGAGCTCTACTTGT GTGGTTTGCAAGTAGATTAAAGAAAATAGTAGATTATTGTGGAACTGTTT TTACTGACCAAAATTTGCTTGGTATAAAATTTTGATCGAACTTTTGGAAC CACTCTTAATGAAAATGGATGGTTCAAATTACGTGATGCCGAATCATTGG TCTAAacatcgaaataatcaaaagaaAGGCGGGCCgggaaatttaaaatt tttggaatagATATATGATTTCTGCCGGATGTTAATGCCTGGTATTTGCT TTTAGACAGTCATCAGATTTCTAATTCTGTGTACTCAAAGTATGCCTTtt ggaaaaactttgaaagCTTTGCTTTATGTATCAGAGCggcttataaagtt ataaaggTTAACGAGGCATTTTTAATACAGTCTCGAACTAAACAtgtgat tttttaaaagaatatttcCGACGTCGAATTAGCAAGAAATTACTTTTTTC ACCTATTCGAAAAtagaaataagtaaaaaaaaattgttttgaacaCGAGA AATTGAATTTAATCTGGCACAGAATCGAACATAAGCCGGTTCATGAAAGC TTATGTAATAGGCTTTACCACTTCCACTTATTTCTTTCGGCAAGTAAACG TATGAAAATATTAATCATGTGCTAAAATGTCTTCTACCAAAATAAAAGAA CGAAAAGAAAGACTTTTGACTGTAAGATGAAAAAGGGGACTAGACACAAA CTGCCTAGAATTAGctgtcaagttttttttttggggggggggggcagttg CTGCCTGGCTGTAATTTGTATCGATAGTCTTTAACCAGTTGAAGGCTATT TACAAAACTTTACCCTTCGTttgttttaagattttttcgcACTCATGTTC TGTTAATGCAGTTGAAAAGATACTCGAAATTACAGTACTTTTAATAAAGT TTCTTTGTTGCGGAATCCATATACCTGAAAGCCAGAAAAACTACTTCACT GAGCTTGAGCAATTCCTCTCAGTCAGATTTTgctaattttcaaatttgaa ctTATCCTTTTTATGTTCCTTTTTTTTCAGAGTCCATATTTGAGTATTGT CAAATACACATggcaaaagaaaatcaaacatATTGGCTCTTCCTTTTATG GTACTTCACCTGAATTCGAATTTGCGTTATACAGCTTGGTGTACATGATG GGTTATGAAAGACTTCAATTCTCATTGGACGGCATGCAAGTCAAAATCAC GTGTTTTGGAATGAACCGAAATCGTAATATCGGAACTTGTTATCCCGATC TCGTTTAGAGAGACtttcttttaagttttttgatatttggttctttttaa taattctgAATAAGCTGAAGATAATTCGTTTTCATATCGttctttaaaat tgtttaaggctgaaaatattcttttattcGAGCTTTAAcctctttc
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00056148TCONS_00056148Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00056148-proteinTCONS_00056148-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_268supercontigscaffold_268:103111..111256 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
2.66 2.59 1.74 1.5 1.01 0.94 0.66 0.67 0.59 0.49 0.94 0.4 18.17 13.52 39.5 83.75 17.18 29.23 35.53 34.75 111.33 98.94 96.54 137.58 94.85 105.74 0.77 0.61 2.02 2.69