XLOC_035484 (gene) - C. hemisphaerica

Overview
NameXLOC_035484
Unique NameXLOC_035484
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_272:127585..131972-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_035484 ID=XLOC_035484|Name=XLOC_035484|organism=Clytia hemisphaerica|type=gene|length=4388bp|location=Sequence derived from alignment at scaffold_272:127585..131972- (Clytia hemisphaerica)
AAAAACAATCAACTTCAATTCAAATTCGAATTAAAAACAATATTTTTGTT CTTATTTATCACTTCAAACCTAGTGACGATCCAAGAATCTATCTTTTTAA TACATATATTTTTTCACAGACCCCCTTGCTAATGTTTCTCGCCCCAGTCA CTGCGAAGATATTTTACACGCGAGTTTTTATAAATCAGTCCTTTCAGTTA CAAACAGCAGTAAACCTACCAGGTGAGTGCTCTAAACCATGAACCATGAT CTCTTTTCTAGCCCAAAACTAATGAATTCTTTACCAATTTCGATTTGCTT CTTTTGTAGGGGTCTAGGACGCCATCATGCAGATCTTTGTAAAGACGCTG ACTGGCAAGACCATTACATTAGAGGTATGAAAAGATATCAATGTTCAGGT TCATTTCTATATTACCTTTATCTTTCATATTTACAACATTAATGTATCCA TAAGTTCAATGTGAGAACATTTTTATGATGACAAAGATGACGAGCCTGAA TTTATGATGTTAATGAGGCATTTGTCTGAAAAATTAGTACAGTTTTTTTT AATTCAGTTCAATTCTGGGTTTTACAGTACATTAAGCACCTTCATGTCAA GACAAGCTAAATTTACCTCAGCATTTGCGTTGAAAATAGCTGAATGCTGA TGTAAATTAAAATGGCCAAAGTTGCACAGAGTTTCTTATAGCAGTCCCTT ATTATAGTCCCTTATAGTTAGTTATATTTGCATCTAATCTGAAAGTAATT TTGTCAGTCATTTTGTGTGTTCATTGCTATGCTTAGAAAACAGGATGGCT GATAAGTTAGCAAGAGTCAGTCTATTAAACCTGATTCATGAAAACTTGAT AAATCTTACTCAGTTATTCTATGTAGTCTTTTCTATGTGTATTTTCTTGT TCCTTTGGTGATGACACAGATGACGAGCCTGATACATAACTTGATGTCAA TGAGGCATTTGTCTGAAAAGGACCCTTTACATTTGATTTCTTTATCAAGT ACTTCAATGGGATTAATTTTTGTGGGATCTAAATTTCATGGATTTGGTTG TTATCATCTGCAAACACAATTTTACAAATGAGCTCAACCACAAGATAAGT AATTTTCAACAATCAAGAGCTTTAAATTGAGAACTTTAATCCATATAGTG TAACCATGTGATGAATTTTATTCTAATTCGCAGTTTCCACTGAGAGAATG TGTAACCCACATATTTCACAGATGTATTCTAGCCCTTCCTTAGATGTCTG ATGGTTACATTAGTAGTTCAACAGTGTTGTGTTTTAATCCTTTTATTTTG GATCACTTTGCCCCATGAGCCTAAGAAACTTACTTGTCTTGTATGTCATT CAAAGCTAAGGATTTAAACTGTAACATAAAAACCAGGATGATGAAAATTG GAATTACCGTATGACTTCAATGATTAACGCGTGTGGCAAATACCTGAATG GTTTTATCACTTACATTGAATTGTTTTTCTCTTTTATATGTGTTTTCCAT ATTCTAGACAGTTCTATAGATAGAAAACCTGATGATGAAAATTGGAATTA CTACCGTATGACTTCAATGATTAACGCGTGCGGCAAATACCTGAATGGTT TTATCACTTACATTGGATTGTTTTTCTCTTTTATATGTGTTTTCCTTGTT CTAGACAGTTCTATAGATAGAAAACCTGATGATGAAAATTGGAATTACCG TATGACTTAAATGATTAACGCGTGCGGCAAATACCTGAATGGTTTTCACA TCGTTTTTCTCGCTTCATTGTCAGTCTGTGCCACAGGCAGAACTTACTCA AATTTTTTCTGCTCGTCTGGGAAGATGAAAATTGACTTGAATCTCTGGTA AAATTGTATGATGACCGGCGAGAGTTGAAACCTTTTGGAGGTGAAAAAGC ATTAAGTTTTAAAAGGTTTTTTACTGAAAGAAAATAGACCTTACCGTCGA AACATTGTTAAATTGTGAAAAAAATGCGTGAACTTCCCAAACGGGAGTTC TACATTTAAGTTTTCCTTATTTTCAACTTTTTCTCCCGCTTCTTCCCGAC CTGGAAGTCATAACTGTTAACCATTTGTTATCTGTTTGGGTGTCAAGTTA ATTTCCCGATCAAGTTAGTGTCACAGACTGATTGTGTTTCCCTTATTCTT GACAATTTTATAGATAGAAAACCTGATGATGATAATTGGAATTACCGTAT GATTCAAATGATTAACGCGTGCGGCAAATATCTGAATGGTTTTTTATCTG GTTTACTTTTCTTATTATTTTCTCTAGGCGAGACCAATTTCATTTGTTGT TTTACGGGTGCGACCGATCCAGCATTTGCTGCAAACGAAAAATTGATATT AAATTTTCCATGCCAAGGATTTCTAATACTAGTTATTTATAAAATTTACT TAAAAAAAGATGAAAAGAATCTAGAATCATGAATTCTATGCACGAAAGAT TTTATTACAAACTCCATCAAAGATGAGTGAATTTTAATTAAAGCCTAATA ACCTTCCTTGATTAATGAAAATCTTAGTTTTATTTTACCAACCGACTGAC TCGTATTTTGCTAACAATCTGCCCGTAGAACAACAAATAAAATTGGTCTC GCCTTGGTTGGCTTTAGAGAGATTTGAGGTCCCGACTTATCTTAAGTTAG AGTAGTTACATATTTAGCACTTTTAGCCTGTTTAGATTTCAAACTTTCCA GTATTTAAAGCAAACTACTAATTTAGTAACGTAATCAATTCAAAGCTTGT CTGAGGAATAAGTCTAGCACATTGTTTTTCAATGATGAAAATTGGAATTA CCGTATGATATAATGATTAAATTGCGGCAATTGCTGAGAAAAACATGTCT TGGTCTGAGTTACTCTATTTCAAAGTGGTTCTGAATCACTCACGCGGGTT GTATGACAAACTATTCTAAGTTCCTTTTCCTGTTGGTGAAATATTGCTTC TAGCGTAAAAGGATTCTTACAATTTTCTGAGGGAAAAATAAGTTGGCTTG ACTTGTCCTTCTCTTATTATGAAAGAACAGATCAGTTAAATTCAGATAAG ATTCTTTTTAGTGAAGAAAGTGAAATTAGATAAAAAATTTAGAATGGGAA AGGAAAGTAGAATATGTCTCAGTTCCAGTTGATATTAATCATTTGAAAGT TCTGTTTACTGACCATAGTCGAGTTATATCTACTTCAGAATAACAACAGT ATTTCTAGGACTAATCATTTATTAAAGGAATTTTTTCACGTCAATATAAT GGGACTTTATTGTTGTAGGTCGAGCCCAGTGACACTATCGACAATGTTAA AGCCAAAATCCAAGATAAAGAAGGTACAAAATATTTCCAGTGTTACTTTT ACTTGTGTTTCTTGCTAAGGCAATCTGGTAAATTTGACTCCCTTGAGAAT TTTCACTTTCTCAAAAATTCTTTGAGAAGATATTTGCTGATTGTATATGT CAAAATTCCATAGAAATTTAAAAAGATGGTAATACAACACAATCGTGGAC GAAAAATTTTCATTAGTGATCAAATTATTTTGAAAAACCTTTTTTAGGTG TGTCAAAAACAAGGGCAAGGGTTGCAGATTTAGGCCCAAGACTGAAAAAA TTGAAAAATCTTATGTCAGTTTCTATCAAATTATTGACAACTTTTGTTTT CAACCTTAGGAATCCCACCAGATCAACAACGTCTTATCTTCGCTGGTAAA CAATTGGAAGATGGACGTACGTTGAGTGACTACAATATCCAAAAGGAGTC AACTCTTCATTTGGTACTTCGATTGAGAGGTGGTGGTAAGAAAAGAAAGA AGAAGAATTACACTACACCTAAAAAGATCAAGCACAAGAGAAAGAAGGTA AGTTAGTTGCTCACAACAAACTAAATATTCTAAGTTTAGATCTGAAAAAA GTGCCAGCTGATGAATTTTATTCTAATTCGCAGTTTCCACTGAGAGAATG TGTAACCCACATATTTCATGGATGTATTCTAGCCCTTCCTTAGATGTCTG ATGGCACAGTAGTTGTTCTAATCGATTATAATTTACCTTTATCAGGATTC TAAATATTGAATTGTTTTTCATCTCACAGGTCAAGCTTGCAGTCCTCAAA TACTACAAAATCGACGATAATGGTAAAATCACCCGATTACGTAAAGAATG TCCCAGTGAATCTTGCGGTGCTGGTGTATTTATGGCTCAACATTTTGATA GACAATACTGTGGAAAATGTTGTTTGACTTATTCTTTCAAGAAAGAATAA AAACATCTATATTAATAAAGTCTTTGTTATTCTTTCTTATCAAGTGGTTA TTGCTCATTCCCCCCTGCATCAGTGCTGATATCATCGCGCTGTGGTTCTA ATTGTTTGCAAATTTTGTCCGTTATGATTCAAAAGGAT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00056329TCONS_00056329Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00056329-proteinTCONS_00056329-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_272supercontigscaffold_272:127585..131972 -
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
RPS27Aubiquitin-40S ribosomal protein S27a precursor Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1609.23 1626.88 1670.19 1801.68 1341.26 1114.91 1396.88 1423.74 2340.44 1803.66 2374.73 2991.79 3396.4 3472.54 3473.56 3271.6 3595.06 3658.62 2137.49 2258.23 3855.68 3742.08 3288.14 3020.79 2480.29 2482.03 3922.89 4141.3 2453.52 2673.02