XLOC_035476 (gene) - C. hemisphaerica

Overview
NameXLOC_035476
Unique NameXLOC_035476
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_272:167351..172731+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_035476 ID=XLOC_035476|Name=XLOC_035476|organism=Clytia hemisphaerica|type=gene|length=5381bp|location=Sequence derived from alignment at scaffold_272:167351..172731+ (Clytia hemisphaerica)
caaaaaaatacaaagaaaaaaataaattaacaaaaaaatacaacGACATG ACGAAAGAACATCATTAAAATTATTGTGAAAGGAAGATGCTAaatatgac ttgaaaaatattgaagcgACAGAGGACGGAACACAGCACTGGTTCAAact tgttttgaaatatttattgttTGCACTCAATGTTGGTCTTGTTAttactg atgacgtcataatattTGTTGCTTGCCATGGAGAAAGAGATATTTGCGGT ATCGGACGTATACGAGCATGCAGCTTCCATTGGGAAAGACATCGAACAGA TAGTCCAAGAATATGGAAAAGAAGCTATCGAAGGTGTGTATTCCACAAAC TCGAATCCAGTCCTAACAATTTCtatatatttctattattttggAAGAAT TTAGTGGCTTATAGGCTACTTGGAATATATTCGATCCTAGCTTGATGGTC TAATCTTAAAGCTAAAAGTTAAAATTGCACTTAAAAATAAGGTGTGGTTT TTGAAGTCTTACAGGGAATTCCCTTTGTTTCAAATATTATCACCATCATT GTAGGTTTCTTTTTAGTCTTCGAGCAGTAACTAAGACACGTTCGATACAT AAACCATTTAAAATCCTTTCTTAATTTCACAATAATATTGCCAAATAATA TCATAATAACATAAACATAAAGTCTAACTTACACTTACTGTATTTCTACA TTCAACTATACTTATTATTATCAGATACGGGAAAACTAATATTCTTTTCA CTCCATATATAGACATCATGCCGAAGATTGTATACGTGTTGGAACAATTA GAAACGCTAGCAGAACGTCACCAGGACGATCAAGAGAAACTAGCTGGTCT GATGATCGAACGTGAAAAATTCATGATCCATGCCAACAGAGATAAAGCTA TACAACGGCAGCTTGAAGAGGTAAGCTGTCTTTTCTAGTGTATAACGATA AATAAAGTTTCATTAGTTTGGACGATATATATGCATAAAATACACAACCC TAGAATAGGccatacccagctggcacacaacgttgtttcaacgtttattt aacgttcacaacgtccatataacgttagatgaacgttgaaataacgttgt gcaCCGGCTGGGTATTCGCTATCTTTATTCAGTGTCACTTTAAAAATCCT TGTCTATTACCCTGACGGCAAAACGGTGCTTGGTCTTTTTAgtaactaat tactccagcatAAATCATTTTAATGATAACATCATATGATTGATTTGTCT TCTGCAACAGAGCTGTCACCCAGGGACATGATAATTTATCCCCTTTCTAC TGGCTGAAGAAAAGGTATACTGGAGTAAATTGTCATTCAATAGACCGTCA CGTTCTCCTAAAcgactaccttatcggggaaaacttcgtcggggaaaagt gacgaaattttggctaagtgacgaatatttttccccgacgaaaattttcc ccagccttAATGCATTTACCAACAAcataccagcaagtgacgaatatttt tcctgACGAAGTTTTCCTCGATAAGGTattttgtttttcgattttATAGA AACTAGCATATATGGAAGGACTCGTCACAAAGGACAAAAAAGATATGGAA CAGAAGCTAAAACGGCTAGAACACGAAAACGACAGTCTAGTTGAAGAACT TGAAAAACACGGTGACGGAGAATCAATCAAATCATCCAAGGAGAAGAACA AAAGTGGTATTAAAACGTATTCTTTTACCTTTTATGGAGTTCTCTCATTC TCCATCTCATTGCTTATTTCCATCTCGTTTACTTTCTATAACGGTACGTC GGACCTTATATCGAATATTTGGTCTTTGCCATGATAATATAGATTCTGAT ACTAGAATAACGAGAAAAATGACAATAAAATTACATTTAACTAAAACACC GTACAAAGTACACTGAAATCGACGAATTACGCGTTCAACATAACCTGATT GACCAAATTGACTaatgttaatatttttttgtttattatatCATTTgggc aagttcatttttatgaaatattattCTCTACGTACATATAATGCAGATAC CAAAAACCTTCTTACACAAGTTATTAGGGCCGACAATGAACCGATGTTTT ATATTTTGCGCAAGGATCAGCATGTAAAAAATGGAAATACTGTACTTCTc ctgtatacacgtttttttataagaataactaaaatttttgaagcctccgg atgttcttaactttgagttctaagcctaaaaatgttcttaacatgttctt attttcacaatcttttgagtatttttgtccatttcctaAGACATtttgag tctgcaaagccttaaagtgttcttaatatttttcccttcgaagacttatg ttcttacattgtttgttcttatatagtttattcttatatagtttgttctt ataaaaaaacgtgtagtatttgaagaaagagaatttttttaccgCCAGTT AGGGTTACTTTCATAAGTGAGGGGTATTTTTCATCTCCTCTAAACGTTGG AAACCATTACAAGACTAGCTATATGACTACCACACATAACACTCCAGCCT AATTATAGAAATTGAAACGTTGTTTATAGCTGATGAAGGTTACCCCTCTT TTGTTGAGGTACCCCTCTTTTGTGGAGGTACCGCTGTTTTTTTTAGGTAC CCCTCTTTTATTGAGGCACCCCTCTTTTGTTGAGGTACCCCTCTTTTGTT GAGGTACCCCTCTTTTGTTGAGGTACCCTTCCTCCGCCTCATCAACAGTA TTGATAAAGTTCCTTCGAACGCGTTGTTGGGAAGTCTGAAATCTTTTCAG CATACAGGCTAAAACTCACGCACACAGCACGTATTAGTTATATTATGAAA ACGCACGCACACTTTAATCCGACGTCGAACGTTTATGTAAAtgatatatt tttgtaaataatagttttttctactctaattttttttttgaaaaaatggg cGTTTTCAACAGTTTACCCTTGGTCCGATTAATAATATTGATTtctattt caaatgaaaatattacctGAATTTATTTTGCTTTTAGCTTTTCAAACTCG CTTCAAAATTGATAATTAGTACTTGAGTAATTTTACTACTGTTCCCATTA AAGGGAACTAATGTTATCGAGGGAAAGAGGGCGTATGTCACATTTTGATG GTCTTAAGTAACATCCaaatttattttagtttttcttttcgtAACATTAA CGACGCAACTTAACCGTGGACAATACTGTACTTGTCTTTGTTaaccattt tattttttaaggcaaaaagaaAAGACAGTTCTTCTTTTGGTTAATGGATG CAATATTGAGTGGGAAATTGTCTTTTTATAAAGGTACAAGTTTTTCACGC AAGCACAGTGAGATGAAACAATTAGTTAAAAATATCGGAAGCGGTCCTTT CTATTGGGTTATTCCAAatatagtctgtaccccctttGTTGAGGAGGTga gacgtccagggtggtcttctttttcgattttaaaaatccagggtggtcag caaaatgaggttgaaaatccagggtggtaaATTTTGAGTGTAAAAATCTA GACTTGTCAGTAAAATGAGctggaaaatccagggtggtcgaAAAACCCAG GGTTGTCCGAaatatgagaaagaaaatccaAGGGGGTCGCGAAAAAATTG GAAGAAAAATCTAGCGGGGTcacttttccaaaaaagacCTCCTAAACAGA GGGGGAACAagtttttctggaatagcccattctaCCCTTAATGGAAATCT TCAATCTACTGAGACTCTTAATGAGCTTTGCTTACGTGAAATTAGCTCAA GTTATTTTTAACCATTCATTGTGTTCCAACAGATTTTTGACTAGGTTCTA TCAACCATATGGCATTCAGAACGCttattatttttaaagaaaccATCATA CAGAAATCTTTTCATGCATGTTTTTGTTATCATtgtaaaattttgcattt ttctgcACCGCACTTATTTTTTTACATTATATAAGTTATAACCTAACGTC ATTATTTTCTTGtgcattttattgttttctgcACTGattaatttcaacat ttttctttgGCCCGCAATCTGCACAAACAACTATTTTACCGTATCTTACT GACCAAACTGAAATTCTGATAATTTTACGAAAACTGGAGTTAAATAATAA TAGATGTATAAAAAACTTTGGTGATGACTTAGAAGAAGGTCACCATGACT ACAAGATGACACCTTTTTACCGACCAATATACATACTTCACATTAGTATT CTTAGACTACATATaactttttcaagaatttttgccTTAACAAGACGTCG TACACTTAACACACTTAAAGACTAATCAAATCCAACGATTAATGTGgtta aaattgttaataatGTAATCGACGAGATTGGAGATTGGAGATAAAAAAGC GACCTCCCTTACTCACCATAATAGCGAATTTatgtttttccttttcattt gACGGAGACGGTTAGTTTTTTATTTGCCTAAATCCTAACTGACTAAAGAC GACGTCAAATCATCACTTTTATCGTCCTTGGGTTTTCAGGTCAAAACTGC GGGCTTTTCCGTCACCCGATGTCCTCAGAAGAGTAGatgcataaactcgc taattGTTAACAGTTAGTCTCGACCACGCAATTTGTAGCACAATGTTATC ACTCTGTCTCACTCACGTATTTAGGTGTTTAATAATTTTGCACTCTATAT TTTATCTTGAATTATTCACTACAAATGGGGGTGGAATGCCTTTCCCATAG ACCTGAGATCAAGTGTCTTTTGTCAAGGATGGTTTTTCAAGTTATATGAG TAAATCTAGGAATTTAAAAGTATAAACATGCACAATGAATAGCCCAGGCG TTTGCCACTAATTTTATagcttaaattcaaaattagaagCAAACACCTGG TCCGTTTTGGGTGCTTTTGTATAAAACATTGCATTATGTATATCACGAAC TTTAGACGGATGACAATCTTTctggtttgtttacattttattactGCTGC CCATCATAACATTTCATTGCGGCCTGCCCTTACCTTTTTGCTCGaaaaat tgttataaatttTTGTATTGCTATGAAATGGAGCCTGACCGGCCTGACGA TTCCTCTAATTTCTCTAAAAATTAAGGCAAttaaaaaaatgaccaaaaaa ctcATTAAAGGGAcagacataaaagtactgacgaaatttgtaaacaaacc gtatgcagcgggatacaaaatcaaaacaaatgtcacatgttaaaataaaa aaatcgaaacaaatggctgattttgatcttttcaattgctttacaagttt gttttggacacgtgattttaattgttctctttaatgacacgtggttcgcg caatgtttacattttactacttttatgtccc
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00056312TCONS_00056312Clytia hemisphaericatranscript
TCONS_00056313TCONS_00056313Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00056313-proteinTCONS_00056313-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_272supercontigscaffold_272:167351..172731 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
52.58 51.89 16.92 12.63 34.93 24.73 33.03 35.72 29.6 36.29 25.63 23.75 33.66 30.64 31.26 32.49 48.68 57.73 33.26 39.09 34.95 34.62 41.04 47.39 51.24 50.27 89.81 55.18 39.52 34.75