XLOC_035526 (gene) - C. hemisphaerica

Overview
NameXLOC_035526
Unique NameXLOC_035526
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_274:27563..32542-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_035526 ID=XLOC_035526|Name=XLOC_035526|organism=Clytia hemisphaerica|type=gene|length=4980bp|location=Sequence derived from alignment at scaffold_274:27563..32542- (Clytia hemisphaerica)
CTCGAAGAGAAATTTGTGAGCTTCTAATAAATATCATTGAGATGGTAAAG GTCTTCTTTTTATGTGTTTAGGAGGGGCATGCAAATCGAAATTCAAATGT TGTTGATGGGGCTGCTGCTAACATTCACCAAGTCAGAACGGTAAGGAAGC CTAATCGAATGGCTGTATTATTTGTTTGCCCTTCATTATCTGTTATCTAT TGCAGTATTTATTCAGCTGTGAGACCTTGATTGCTTTATTTTTTGCATTC CACAATATTTCCACTTAACCTTTCCCACTTTTTTGTGACTTTTTTTCAGA ACGAACTGCTGAATGAGATGTTGGCAACTCAAAGGCGAACCAACATTCTC CTGGGCCAATTGATTGCAAAGGTATTTTTTTTTCAATTTCTCAAAACAAC TGGACAACTTTTTTACGCGATTTAACACAACTACAAGCACATCCACGCGT TTCTAACTTGAACCTAGATAAATTTAAAACATGCAATATTTGTCTGTTTT TTTTGTAAATTTCGCGGCAAGATAGAACATTGGTGTTACCATTCTTTTTT AGGTTTCAGAGCAACCATTACCTAATGCAAACCCAAACCTAAATCAAACA CAAACGGCTCCTTTAGATGAAAATGACTTTGTAAGTATCATTTCAACTTC TTTGTTTTTAACTTCATATCCACTGAGTTTTGAATACTTAAAGGAAAACT TTTTGGATTAAGTTCCCGTCAAATTTAGTTTTCATCAGAAGAAGAAACTG TTAAAATTCTAACTGACTTGATAATTTTGAAAAAACTCTTGAGAAGGAAA GAAAGACTTGACATTTTTTTTTAGTTTGAATAATTTTTTGAGAGAGACAA TTGTATTTACTCTCTATTTACTTTATGTATTTTAACCATTGTTATTCTAA ACCAAATTACCGAATTCAGTGGCGTAGCCAGGATTTTCAAGGGGTGTCGC AAATTTCAATTTTCAAATGGGCGGTTAGAGGGCTGTTGTTAATTTCATTA GGGCGGTATCAAAATATAACGCCCAAATACTTCCAAACAACCGGGGTACG TTATGGGGTGCAGATCCCAACACCTGTGAACCCCAAACACAGGACACGTT GCACGTGGTTAACCGGCAACTCACCATTAGACGAGTTTACCATTTGTTGA ATGGATGGCAGAGCCGCACATTTGATCAAAAATATTCAAAGAGTGAGTGT CTCGTTCGTAATAATAGCTTGTGGTTTCTAAAAGAATGATATTGCCCTTT GGGAAATTCCTTTTGTTCTAGGGAAATTTCCGGACGAAACTAAAATGGTA CCGCTATATATTACTCTTTCTCATATGTACTATTAGCCTAGAAATCTAAG CTAGTTTGATTCAGTCACTTGGATAAATCTGATGGTTAAGTTGTGACTGA ATAACTANGTTTGATTCAGTCACTTGGATAAATCTGATGGTTAAGTTTTG ACTGAATAACTAGCTTAGGGACAGTAAACTCGGTAGCTTATCAACTGACA AAAATATGAAATCACACCAAGTTCTTATTGGCTCTTATTGTAAGATTAGA TAAACAAACTCTCCGTCTTACAGTTTATGCGCTCCTTTTGTAAAATATAA AATGAAATTCTATTGTAAAGTGTGCCGATGGAGAGTGAAAGAAAAAATTT GTTCATTTTTTTCAATAAGTTATGTTCGTGTTATATGGAAAAGTCAACAA GAGACAAATTCGTTACTTGAGTGATAATTTTGTGATTTGACATAAAAGTA TTTTGCATGATTTTTACAAAGCTCATCATAAAAATAACCTTCAACAAAAT AAATAAAAATTACTTTAGACTAGCAGGCTAAAATGCCGTATACAAAACAA TGTAATCAATCCCCCCCAAAAAACATTTCTTGAGTCTTGATCTCGTATAG CTGTCACTGAAAATAAGCACCGACAATTTTATGTTCTTCGAAAACGAAAG ATGTCTGTAAAATCGAGCATAAACCAGTAGCGGCCTGGCTTAAATTTCTT GGTGGTGCAAATTATGAAATTGGCGCCCCTGGTGTTTTTGTCCTTATTTG CGCCCTCCATCATTAAGTGAAAATATTAAACTGTAAGAGCAGTGACTGGT TGAAAGTAACGCCCCTAATCTTTGAAATGGAAATTTTATACCTGGTAAGT CGACTTAGTCTACATTTCTGCTTTCTAAAACTCTTATCAGAAAAATTACC AGGTAATATTTAAACTTTCGCAACTCTTTATTAAAGATCAATGGCTGAAA GAGGCCCCAAAAATTCAGAAGTTGGGAGGAAGGGTTCCTTGTTATTGTGG CGCCGCAGGCAAAAAAATTTGGTGTAAGAAAGGTCAAACAGCTTAAGGGA TCTTCTAAAACGGAGAAAGTTAGTCAGTATAAGACCACAAAACCACAGCA AGAATCAACAAGTTCTGATCATTTTGGCAATCTCTCATTTTGGGGTGAGC ATTCTCTTTAACCCCAGGTGGATACACAACACTTCTCTACTTCGGATTCA ATATTGATAGAAGTTTTGAAAAAATTCAAGAGAGGAAGGATGCAAAAGGG TAAAATAAAGCGCCGCAGGCGAAAAAAGTTAACATTGTACTCATAGAAGG CGCTATAAACGTGCCGAAGGGATCCAAATTGCCCAATTAAACATCAACAA AATTTTGGCGCCCCCTTAAAAAGCTCTTTTGGCGCCCCTATCAGATCTTT CTGGGTGGTGCACTGCACACCCTGCACCCCCTGCCAGGCCGCCACTGATA AAGTCTCAAATTCATAAAACAACAAAAGAAACCACAACCAGTCAAAAACC AAGAACTGTCTATCATCTATCCATTACAGTATAATACAATATCATGTCAT GCAATCCAATCAGAATACAGAACTACAGCATAGGATCTGTACAAGTACTC TCTCTTATATATTGCCACATACGATAGTCAATGTTCAGCCACAAATCTTT ACTTTATTATTTGCCATTCTGGAAACAAGCAACTTTTGCTGTCTTTACGA CGAATAGCATTTATTTTTCTTCATCAGTTCAATTCTTCCCAAAAACAAGA GAAGCACTATCAGGTCGGGATCAGGTCTTGAAAACTTTTTCTGATACAGT ATTCCAAATATATCTCTCGGCTCTCTCATGGTAATAGTCTCACATCATAA TATAATCGAAGAAAGATCTTGCATTCAATGAATCCCATCCTCTTCTACTC GTTTTCTGATATAATAATTATAATTTACGGTCACCGATGAGACCTCTTTT GTTCTGCTAACAATTTAACAAAGAGGATAACAATAAATATCAAAGTCGGT AGCCGTGTCATTGTTTTAGTGCAGACGATGAAGGCCAAAGTGAAGAAAAA TTTCTTATTTTACGGTCCCGGAGCTGTCTTCATTTCTACCGAGCTCTAAT AAGCTAAGGGATCGCAATACTGAATTTTGATTCGGTGCCGTAAATTTATT AAAATCTAAATATCTCTGTCAATTTAAAACATCGCCGCCAATTGAAGGCG ACGTGATTTTCTAAAAAAGCCGCACGCCGCGCGTATCCGTACGAGCGCTA GTCGCCGCGCGTCGTCCTCTTACCAGCGCTTTTTATTTCGTGTCTTTCAA AAACTTTTGTTTCTCAAAAAGGGTGTCGCTGAGTCTTCAGGAGCGACACC CTAGTGACGCCACTGGAATTACGAAATCAAAAACAAACACTTTTTTCGAA CATGTATATAATTTTTTCATTCAAATCAGCAACGCAATTTTAATATGTAA CTTTTAGCTTACACAAAGGTTTCTAGATAACTAAAATGTTCCTTTTCGTT GCTTTCATTACTTTTTGCTTCATTTCCAATATCTGAGTGTCGCCGTGCTA GATTACATTTAAGTACTGTAGTACGGTTGTCTAAAGCAATAAAATTGTAT TTTTAGGTTCTGGCACATGGCTCCAACTTGTTAGATGTGGCGAGACATGA TACTCCTACAATATATACCATTGCCTTGGCTAAGGCGATGTTTACGACGG AAGAACTTGAAAATGGCATGGTCTCGCCTAAAGCAGGCAAAAGGAAATCG AGGACTGCATTAGATCCTAATCAAGTCAAGAAAATAAAGCGTAAATTGAA TTATTTCATCCACCATGGGTTGACAAATACGATTTAACTTATTTTCAAGG TTTTTTGCTGTTTTATACAAATAAGTCATGTTAAGCCTGGGAGCTCCTCA AAAAGTTATGCCTTGTTTTTGTTTTTNAAGCGTAAATTGAATTATTTCAT CCACCATGGGTTGACAAATACGATTTAACTTATTTTCAAGGTTTTTTGCT GTTTTATACAAATAAGTCATGTTAAGCCTGGGAGCTCCTCAAAAAGTTAT GCCTTGTTTTAGTTTTTTTTTAGTTGTGATATAAAAAAATTTAAAATTTG TTTAAAAAAATTGGCAGTCCGCACATTTTGGTTCATTGCTCTTGAAGGGA AAAAGACAAAACCAAAGTAGTAATACCTTATTGAAAAGACAATTTTGAAT GGTAGAATCTAAGCTTTAAATACTTTTTTAAAGAATTCGAAAATGAAAAT AAAAACTTCGAGAGCAATCAACTAAAATGTGTGGACTGTCAATTTTTTTT GAAATTCGTTCATATGCTTTTTTTACAGGATTGATTCAACACCAATATAA ACTGGAGGAACCAAAGTTCAAAAAAATTTGGCCTCATTGCCGGAGGTCCA TCAACCAGGCTGGAAATGACGCCAAAAGAAAAGCTGACGTTGAAGATGAG ATTCAAGAGAATAATTAATTTAAAATTATAATTGGTGCAAAGAAAAATTG TTTAATACAATCTATATTGTGGTATTATTTTTGTTGATCCGTTCCTCAAA ATTGGATATAAAACAACAGCTCTAATTATTATTTTCGCTAACCCATCTCG GACAAGGTGCTTAAAAACAACTACTAGTCTTCCAGGATATTCAAAACACC GAATGGTTTTAAAAGAAGCTTCAAGATTTG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00056378TCONS_00056378Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00056378-proteinTCONS_00056378-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_274supercontigscaffold_274:27563..32542 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
4.7 5.28 2.04 1.02 21.67 17.6 14.04 13.52 12.89 9.8 8.72 15.78 11.69 13.72 19.36 15.7 32.11 31.42 14.73 11.72 25.68 19.69 15.91 17.11 0.09 0.56 7.45 6.13 5.71 6.22