XLOC_035559 (gene) - C. hemisphaerica

Overview
NameXLOC_035559
Unique NameXLOC_035559
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_276:288615..293410+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_035559 ID=XLOC_035559|Name=XLOC_035559|organism=Clytia hemisphaerica|type=gene|length=4796bp|location=Sequence derived from alignment at scaffold_276:288615..293410+ (Clytia hemisphaerica)
ATACGTGATTATAGAATGTAACAAATACATCTTTATTTAAGAGCCTCGCG ACTCACGTAACTTCCCAAGAACTTTCAAGACCAGGATTCGTAGTATCATA AACTATTGTTTAAATACATTGGTACAAAATTTATTACCTTAAGGGCAGAA ATTTTCGTGGGAAccaattttcacagaatttaatctcgcggttttttgac aaacccgcgaaacacgaatattctcaggatttaaaaaattacttCTAAGA TTGGTTAGTTTATGGCGAAatatttcttcccttaaaggtatttcttcaaa tttattttctttaggTTGAAGAATTAGGAGGTATCCGTATTCACGAGATT GGTGAGGGAGATGATGATGGTAATATTGAGGATGATTTTGTGTCGTGGAG AGAAACATTCTGGGATACCGTGTGTGAGAAGTATCATTTGAATAAAGATA AACGTAAATTGTCATGCTCTGTCTCAAGGGATTACACGCTCAAGGTAAGA AGGGAAAATTGTTTTTCATCAAATCAGGGAGGGTATGGTTGGTACTAACA TATCAGAGACATATGTATACTATATTTGGGGACATTTTGATACACAATCA Tggatggacaaaaggttgtagacttttcaaaaattgagtaaaatctctca aaatgcCCTACTTTCCCCTCTCCCCCCTCTGCAACGTTGCACTGGTGCTG GCATCGCTACACGCCAATATCACAACTCATTTTCTATCAACATTGTGGGG AGAGGAAATTTCTaaaagtctacaaaccttttgtccatgattgcagAGAC CAGCTAATCTTTGTCTTCTCGGGACCATTTTAtctaaaaagtgatttttg taaCATAATATTCATTTTTTGCAAAGATTTACACTTTTGAACGATGCTAC TTTACGAATTGAGCAAACATTAGAGAtatttgcaaaaatatttttataat taataGTTATCTTGAGCAAAGCTTCTCCCAATTTCTCTTGCTCAAAACAA AagtatttgaagatttttttataaaagcttACAGATCTCACAGCCTCGCA TTCTTATTCAAAAGTTCCTCTGTCATCTCTCATCATTCTTTATGACATaa atcgttcttataaaaggaAACATTCACACCCTTCATTGATTCCgatattt tttaattctgttGCTCAACAGCATTAGTGAGTTAACTCGAACTCCTCTTT AAATCTCTATAAAAATTGGAACTAGTTCTCATTGGAAACAAATTGCTGAA TTAAGTCATGATTAACCTCTctcaaatcgaaaaatccctgaaacaaagtg gaagtactgaaattgcaattctcgcccgatctttgaattctaaaaaacgt tgaaataaccaaaattgccaatatatttcggcactGATTGTAGGTGTAGC ACTGAATTAAGTATTTAACTGTTCATATCATCTGGTTTTTACAATCTAGA AACCTGAGAATCTCTCAGACGACCAGATTTACCAAGGTGAGATCACTAAG CTTGGTTCGTATACCAAACAACGTCCACCTTACGATGCAAAGAATCCTTA CATGGCAAATGTGGCTGTCAACAGGGAACTCCACAAAGCCGGTGGTCGAT CTTGTATGCATATTGAAATTGATATCGCAGACTCAGGGATCAAATACAGC GCAGGTAATTAATTGTTTATAAATCTATTGTTATTACATTTTTAGTCAAC TTGCGACACCTGCtaattattttgtctttttttcaggATGATATCCTAGA AAAACTTAGGGTTCCTcttaaaaaatggtttttattaaaaaaatttattt tcaaagggGACGTCATCAGCCCAAATTTTTACCATACATTTTTGttacat ttgaaaaatttagaatgaGACGATCACAATAAGCTATATACTATTagaag tttttgtttttcaatgcGTAATAatatcatatcttaaagatgTCTCCTAT TCAGACTAGGAAAATCCTCGATATTGCGATTTTGAAGTTATAAAGCAAAA CACTATAATTTGAGATCGGGCCAAAATTTATAAACATCtcagtgttttta tttaaattgaGAGAGTCTTTGCACCGAATAAATTTGCTTTGCGTAATCAA CCCTCTGCTTTGGTCGTTATTTTCTCCTGGGaaacatatttttatcaaat gataaTAGTACGAAAGTTGAATAACCAACTCAAACATACCTTTTATCGGa gaaaaatgtcgggggaaagtgacgaaaatcttgaggggtgacgaaatttt tttcaaCGGATTAAAATCcaacattttttccccgattaGGTAATTTCATC CGTAATtttgattaaagattttttaaactcttttttCGCACTTTTGACTA GGTGACCATGTTGGTATTTATCCCACAAATGATCCAGAATTGGTCGAAAA GATTGGAAAGTTACTCAATATCGATCTGGATGAAGTGATCTCTTTGGATA ATGTTGATCCAGATGCTTCTAAGAAACATCCGTTTCCCTGCCCGTGTTCA TACCGTACCGCCTTATTACATTACGTCGATATTACGTCAACGGTTAAAAC TCACGTATTAGCCGAGTTGGTCGCTCACACCAAAGACCCAGAAGAATTAG CCAAGTTGGATTTGATGACAAGTTCTTCTGCAGACGGCAAAAAGATGTAT GATGAATGGGTAGTTGGGAACAACAGGCATATCGTGGCCGTAATGGAAGA TTTGAAAAGCTGTAAACCGCCCCTTGATTTGTTGTTAGAGTTGATGCCTA GGCTTCAATGTAGGTATTATTCGATTTCATCATCTTCTACAATGCACCGC GATCGAATCCATGTCActgctgttgttgttgattGGATTTCTAAAGCTGA TCGATTACACAAAGGCGTCGCCACCCACTGGTTGAAAACCAAAATCCCCT GTGAAAACATCGCCAATCTTCGTGTCCCCATTTTCGTTCGCCGTACAAAC TTCCGATTACCTGTTCGCCCAATTTCCCCTGTTTTGATGGTTGGTCCTGG AACCGGATTTGCTCCTTTCCGCGGCTTCATACAAGAGCGTCAATCACAAC AAGAATCAGGCAAAGAAACCGGAGATACTATCCTGTATTTCGGATGTCGT AAGCGTGCAGAGGATTTCATTTACGAGGATGAGTTAACGAGTTACGCCGA AAAAAGAGTGATTACGGACTTGCAGTTAGCATTTTCGAGAGATCAAGAAG CAAAAGAGTATGTTACGCATAAGTTGAAGGCCGATATGGCGAAAATCTGG GATGTGATTAAGAAAGGAGGGCATTTATACGTGTGTGGTGATGCACGCTT TATGGCTAAAGATGTGCACGACATTTTTATTGATTCTATCGTGACACACG GTGAGAAAAGCAAAGAACAAGCTACGAGGTTTTTGAGTAGTTTGAGCGAT AAGGGACGATATCAAGTTGATGTATGGTCTTGAGATATCCTCCTTCtttt ttgttattattgttTAGGGGTGTTCTTTTTGATATGATTATTTAATTCTT TGCTTTATACTTTAATAaaaatttactgatttttttgaaattttatttat cCTTAGCGAAATTTTATTAGGGACCAGTTGTGTCAGGGGAAGAGCAGAAA GGATTTTCATATCGTGAAACTTTACGATATCTCTCTTATTTAGAATACCC TTGAGCATCTTGGTTTTGTTTGAAtgtcaaaatgaaaattgatcAAGGAG ACTTGATCAGCAAGTAGACAAAGTTGTAGGATTAGGACATTTATCTGTCC CGCTTTTTTCTGACACGCTactcttgtgtgcttaattgtggggggggggt tcattttgcaatttttagaaaaaaaatcacccccatatcactttataatg accccTCCCATTGTATGACCTTTATGCTATGAAGtgccaaaattggccaa aaacctttttagcaaaatcaggtCAACAGCACTTAATTATGCCCCCCCCC cacattttgttgatttttatctggAGTACCCACCCCTGCTTATCACACCC CctctacaattaagcacacatAAGTacaatttgtaaaatattgataattt aCTTCATAATATTTTTGATTCTGCTTTTTCTTAATCTTGTTACTAATTTG TTGTCGTGAAAATAATTCAGAATGCTACGATGCAGAATTTTGCAATATAC TAAATTATACTACCTGTCTTTATTTTAAGaagatccaaaatttttgaagc ctgcggatgttcttaacatgttcttattttcaccattttgtgagcatttt atCCATTTTCCCAAGAAAATGTGTGCTTATGGTCATCAAtgctttgaaat gttcttaacttgttctcaatattttgaccatcgaagcatGATGTTCTAAC ATAGatctttcttataagaaaatgtgTATTTCTGAAATATGAGGCTGAGG GTGTTGTTAGCTTGTTCTCCGCATTCCgtattttattctattttattcct ggttttgttttttttggtgccatttttatcatttttgtagTCGAATATAT TTCTTATCAAGCGATCCTCTTTTCGATTGACTTGGAccgtgaaaaaaaat ttattcattttaatTTGCGATGATTATTTAATagtgaatatttttaaaaa tatttttgatggcATTTTTTGATCAAAGTTTGATAGGGTTAATAACATAA TACAATAGTATAGATATACAATTTCCACTTTAGTTTTTCACTCCAACTTT GTGGCAGCTCAGACTATATGCGGGGTCGTTTTATTTAGTAGTGTGCATTT TTCTCCGGAACGGACTAAATTGTCTTAGATTTTTACAACTTTGACC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00056427TCONS_00056427Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00056427-proteinTCONS_00056427-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_276supercontigscaffold_276:288615..293410 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
17.95 17.18 26.48 33.06 92.99 73.18 41.62 45.65 29.05 37.69 32.34 18.84 16.8 14.6 12.97 18.45 21.76 18.91 10.63 15.91 18.79 23.16 26.01 24.62 16.66 19.69 28.42 20.29 34.06 28.19