XLOC_035566 (gene) - C. hemisphaerica

Overview
NameXLOC_035566
Unique NameXLOC_035566
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_276:458697..462189+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_035566 ID=XLOC_035566|Name=XLOC_035566|organism=Clytia hemisphaerica|type=gene|length=3493bp|location=Sequence derived from alignment at scaffold_276:458697..462189+ (Clytia hemisphaerica)
TGGAAAATCAAGGTaatgtgaaaaatttaattatcAATATCTATTGATCT
TAATTGATCTTACTTTCTAGATTCAATCCTTGGTGCAAATAATCTCAAGA
CTTCACTTTCTCTTGCCTGAGGAAGGTCGATggtacaccttttcgactgt
agccaccaattgccgcaCGGGAATTTTtgtgtccgctttatcccactaaa
accgtcccagtccttttttcgcacctaaagacaatagaaaaatgcgtcaa
aaaaggattgggacggttttagtgggatgaagcggacaaaaaaaatgccg
gcgcgactacggtcgaaaacgGGATTAAAACTCGTTAGTGAAAgaagctt
tcaaaaaatgaataaaGTCTACTTACTCCCGAGCACGAGATATTCATGAT
GCGACACACTTTTTTATCCAAAACTTTTgcagccttcggatgttcttcaa
ctttttgagttttaaagcctaaaatgttcttaaaatgttcttattttcaa
gattttgtgagcaagtttgtctattttcctaagaaattgggtgtttctgc
aaagccttaaaaatattcttaacttgttcttaattttttggccatcgaag
ccttatgttcttatttagtttgttcttatagaaaaacgtgtactttcCCT
TTTAGGTAATATCAAGTGAAATTTCTGTTGAAGTGTTCTTCAAGAAATAC
CTGAACCCTAACAAAACATTATCCAATCAAGAATGCTGTAGACCAAAAAC
AACATTCTGTAGAATTGCATGCGAAAATACATTCTTTATATGTTTGGGTA
CCAATTGTACAGTTGGTGTTGGTGATATCAAAGTCAACAAAATTGCcctt
gaagatgaagaaaaatttaagaCGGGGGTTGATGAGACAAGACTGCAAAA
TCCTTTCCCTGTGAACCTCCCGTTAGGATTCATGAAGGTAAGccgttttc
actttattttttaagGATATATTGGTATTTTGAAATAGAAATCGAGCTAT
CTATCAGGATATTTCACAAGGGTGACCCTTTATAAATTGATATGAACATT
TTTGATGaataggcttttccagaaaaagtaTGTACCACTAATGTTATAAA
ACACGcctaaaaaattatcaaattctGGGGCACTAACAACTTCAAAACTA
GTCATTTTATAGTCATACAATTATAGATTTCAAAAAGGGAGATTTTCAAA
GGAGAAACTTGCTTCATTTATATAATCGTATTTCAGGACAAAATCTTGAT
GTCAATCGGGGTATTTCACCAAGACACTAACCTAGTGGCGGAATTCAACA
ACATCGAAGTAAAAATTGATAAATCCTCAAACTGGCAAGACATGGGTACA
CTACGAACAGTGGAATCCAGAAGATATatcaaattccaaaaattaCTGGC
CATCGAAGTAAGGTAAacctgcatttctttcaaagaaGACAAATCAAAGC
TAATTCATTTtgcccctgtgtcacagacccggtggaacccCCTATACACT
AGAAAAATTAGTTAAAATGTCGTCCCCATAGGGAAATTattccaaaattt
cagccccattataaaattttattgtttttatctttgtttTATCTATTCAT
TGAAATTCACTGGaaagaaattgcactccaaaaacatccccactggattt
tttgacctgagaaaaatagaatttctatctctATTGGAATCTAGATAGAA
ATTTTCACCCACTGTGGGAAGAAGTTCCACTGGGGTCATGAGATAAGATT
GTGTCAAAAAATCAATCTGTCAAGTCAATAACAGATCCCTAAGCCTAAAG
CTCTTTAAGTTTTCATCCCAAATCGGGTATCAACTGATCCTCTTACGGAA
CTGGTGTGGTAATGAGGATCTGCTCGGAGAGAAAGAAGTAAGGCCTTCTG
TTGTATTTTAAGGACGAAATGTAGCACTGATTATACAGGCGAATGGTGTG
ATATCAAAATTTGCACACCACGTGACGATACAATGGGCCATTATAATTGC
ACCAAAGATCACCAGAAAGTTTGTTTAAAAGGATGGTTCGATCCTTCTAC
AAATTGCACTTTAAGTAAGTGAATTAATAATATGTCACAAAATccctgaa
aaattacaaaattaatCTGCTTAATTGATGGTAAGGCTGAAGAAATTTAC
AATGCTACTTTGATCTTATGGGGACACCCCGTGGGTTCTAAACCATTATC
TAGAACACCATGGGACACCCCAATGGAACTACCTGTCTGCTACCCTTGtc
gaccagcggagcatccccgtaacccttcttgccctagtaccccccccccg
ggcctttCGCCTCAGTTTTGTTTCAAATGTCTTCTGTGTGTGTACCAATC
GATGCAGAATTTCACAAACATTTaaaatatacaataaaaaagCAAGCGAA
AGTATTTGTATCAACAGTAGTTATGGTCCTTTGGAAATTTTGACTCCTCT
GCTCGATTTGAACAGTTTTTgaggtttttgaaattttcattaagcCCTTT
AAAACTCTTTTTCTGTCATCGAAGGCAACCCTCTAACAACTCGCAAACCA
TCACCGACGACAATTCACACAACCATAACAACTACACAAAGCATTCCACC
ACAGAGAGAAAAAAGTGGTCGGAACAATAAAGATGGCGGTGGTAATAGTG
ATAAACAGATGACCGAGTTCGCAATCATTTTCACAAGTTTATTCGCAGGT
CTTATTGCACTGGCAGTGATCTTGATTCTTGTGAAGAAAAGGTAACATCT
TGCAACATCGTTTTTCAACATTTACTACCTACGATGTTTTAGacaatttt
cgatttcttttaaGATGGAAAAAAGGGAGCTCATGAACCAAACCTGTCTC
CTTGCATTATgagacactttttttataagaaccagagaaatttttgctga
ggttCGGctgttattttttttagcacTTCGAGcccaaaattgttcttatc
ctgttcttatttataggataGGGTGTAAATGATGAATTCTGGacgttatt
ttttaaatcattcttatttttttggcgattttgagcctcatttttcttat
aaaattgttcttatacacTCTATCTTCATGCCAAGagaatatcaactttg
gtaCGAGTTTGAGTCATTgagggctcttccagaaaatgttcctacaagag
gggggtggaggatatagtgtccagggggtagtgaaaaatctacaaaattt
gccttgtcctgGGGGTAAAGTTTCTCTGTtttagggtaattttgaatgtc
caaggggtcaactgatgcttgtccagggggttacaaaaaagtcacaatgt
ccagggggtaaatttctaaaaaatgttatatctcccccccccccccccat
attcaaatctttttctggaaaagcccattctttcaagaattttctttttt
atattctcAGAATGAAGTCCATGGCAACCATTCATTCGTTCGAGCAACCT
TCAGAGTCAAGCCATTCATCGTCAAAGGCGAATGAATGTGTAG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00056434TCONS_00056434Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00056434-proteinTCONS_00056434-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_276supercontigscaffold_276:458697..462189 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0	0	0.54	0.32	1.41	2.22	0.38	0.68	0.15	0.07	4.1	2.85	10.54	4.37	3.74	4.56	2.22	1.88	0.58	0.7	0.06	0.05	1.23	0.95	0.07	0	0.22	0.06