XLOC_035657 (gene) - C. hemisphaerica

Overview
NameXLOC_035657
Unique NameXLOC_035657
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_277:394283..402649-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_035657 ID=XLOC_035657|Name=XLOC_035657|organism=Clytia hemisphaerica|type=gene|length=8367bp|location=Sequence derived from alignment at scaffold_277:394283..402649- (Clytia hemisphaerica)
AGCACTCACAGGTTTTGCATAAAAGGACCAGCAAAATGCCATTCCAAATC
ATTCAAACATTTTTGCATCAAAGCTGAAGTAGAGAAGAGCATAATGAAGT
TAGGAACGTTGTTGTTAGCAACTTGTTTGGCTTTTGCCAGTGGAGCCTGG
GTACCAGAAATGGAAAGTAAGTTAAAGCAAGCTTATTGACATTTTATATT
TTTCAGATCATTTAGCGCATTGGGCTTTTTCAGAAATAAATTTGATTACA
CGTTTTTTTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNACGGTGATATACCTTTCGGTAATTAGTTCTTACAAAGTA
AACAAAGTATGGCGCACAATATGAGCATATTTATTTTTCTTATAAGCATA
TAATTTATAAGAATCAAATCAATAACTATTGATAGACGGTAATATACCTT
TCGGTAATTAGTTCTTACAAAGTAAACAAAGTATGGCGCACAATATGAGC
ATATTTATTTTTCTTATAAGCATATACTTTATAAGAATCCAATCTATAAC
TCTTGATAGACGATGATATGCCTTTCGGTAATTAGTTCTTACAAAGTAAA
CAAGGTATGGCGCACAATATGACCTTATTTATTTTTCTTATAAGCATATA
CTTTATAAGAATCCAATCTATAACTCTTGATAGACGATGATATGCCTTTC
GGTAATTAGTTCTTACAAAGTAAACAAGGTATGGCGCACAATATGACCTT
ATTTATTTTTCTTATAAGCATATACTTTATAAGAATCCAATCTATAACTC
TTGATAGACGATGATATGCCTTTCGGTAATTAGTTCTTACAAAGTAAACA
AAGTATGGCGCACAATATGAGCATATTTATTTTTCTTATAAGCATATACT
TTACAAGAATCAAATCAATAACTCTTGATAGACGGTGATATACCTTTCGG
TAATTAGTTCTTATAAAGTAAACAAAGTATGGCGCACAATATGAGCATAT
TCATTTTTCTTATATAAGCATTTGTTTTATAAGAATCAAATAAATAACTT
TTGATAGACGGTGATATTACCTTTGTTTATTAGTTCTTAAAAATTAAACA
ACAGTTTGTTCTTAAATTGGTCTCTTTTTTTAGCGATTTTAAGCCTCGTT
GTTCTTGTAAAATTGTTTCATCAAGGCTCGATGTAAAATAGATTTCAAAT
TGGCTTCAATCTCTACTTCTCGTTTTTTCCTATGTAGTTTAAATTCTAGG
CGAAATTTTCGACTTTAAGTCGTCTTGTTTTGTATCATATTGTCGATTTA
GAGTAGTCTGAAAAATTAAGAACGCATTTAAGAACATTTTAGACTGAAAA
TTGCTAAAAAAAATAAGCACATCCTGGCTCAGCCAAATTTTAGGTGTTCT
AATAAAAAAAAACGTGTATGGGGGCTGGATGATATAACATTTTTTAGAAA
TTTACCCCCGGACATTGTGAATTTTGACCCCCGGACAAGCATCAGTTGAC
CCCCTGGACATTGAAAATAACCCCCACACAGAGCAAGCTTATTTCCCGGA
CAGGGCAAATTTTGTAGATTTTTCACTAATTTTTGGATTTGAGCATCCTG
TCTCCGTGTAACTGAACAATTTCAATTGACTTGTTAAATTATCAACTGTA
ACAACGTTCTTCCTATTCTTTCATATCATTTTAGACGAAGGTCTTTACGA
AGGAGACATGATTTTAGATCCTGACCAGCAGAAGGAGGTCGAAGATGGAA
CTTTCACTTTCTCATCCACTGGCAACAGAAACAAACTGTGGCCAAACGCT
GTCGTTCCTTACTCATTGACTTCTGATTTAGGTAAGAAATTAAAAAAACT
ATACTGTATTTTACAAACTATCACTATCTAAGAAATAAGCACTAGACCGA
TATTTTGACCAATGTTTTCAGTGGGAAGGGGTTACAGTGGGTCTGTGAGA
AGGGGGTGTAAAAGAAATTATCAAAAACAAAACAAATAACTTTCGGAGAG
GGAGTTCATTTCAAAGTTTGATTTCTAAACACTTCCCGAAATTACAAGAA
CATGGATGGTTGTAACTGGTCAAAAACCCTCGAACTCCCCCATATTATCT
CAACGAATACCCATTAATTATTAGTCCATAAAACATTCTCCCTCCTTCCC
GACTTCACCGACAACCACCAGATACTTATTTTATTTACTTCTTCTTTTTA
CTCATTGAATATAGCCCGTGATGGAAAATTCATGCGTGAATTTCAACATT
CGATCGATCAATATCACAAATATACTTGTATTCGCTTTAAGAGACGATCA
AATGAACGAGCTTATATCGGCTTTTACATGGGTGGAGGGTAAGGCTTTCT
TTACCTCTACGTTCACGCCCTTTACGCCCTTTACGCCCTTTACGGTGCTC
CAATCATTTAGAAAACGTCATTTCAATGCCGTTTTTCTCGAGTGACGTTG
AGAAATCGACCATGTCCACTAAAAAGTCCTCTATATCGTTTTCGAGAGTT
TTCGAGTAGTACAAGTAGTTTTGGGTTATAGAGACTTTGAGTTTTATTAA
ATTCCAGGTCCCAAAGGGTTTTGCTTGAGACGATAGTCTTTTACCCATAA
AAGGATTTGATTACCCCCTTCTCAAACAAGTTTTTAAATACATTCTTCTT
TCGAATGCGCTCTTCCAGAAAATGTCCATACATGGGGGGGGTGGAGGATA
TAGTGTCCGGGGGATAGTGGAAAATCTACAAACTTGCCTTATCCGGGGGT
AAAATTGCTCTGTTTGAGGGTAATTTTGAATGTCCAGGGGGTCAACTGAT
GCTTGTCCGGGGGGGTTAGACCTGCTGTCCGGGGGTAAAAAGTAATGATG
TCCGGGGGGAGAGGGTAAATTTCCAAAAAAATGCTATATCCTCTACCCCC
TCCCCAATATTTAAATACATTCTTCTTTCGAATGAGCTAAAATCAAATCC
ACTCTGGAGATAGTTGTTGCTGATCCTAAGAATAGCTTATATAACAAAAA
GTTTAGAAAGTTTGGCCCAGATTTGTCTTGATGATGCAGCAAACACTCTA
TCACATTCACGATTTGCGTATATGAATTCTGTCTTTCTATTTTAGTTGTT
CGTCACCAGTCGGTTATACCGGCGGCCGAAATAGGGTTTCGTTATCCAAA
GGATGTCATTGGAGATCAACCATCATGCATGAAATCGGTCACAGTTTAGG
TAAGTAAAAATTTACGGAATGGTCACACAGGCTAGAAATCTTCAGGAAAA
ATAAAGTTAAATACATGTACAATCAATGTTTCAACTTTTTCGTTTGTAGG
AGGAAAACGTTATTTAAGAATTTTCAAATTTCCATCCAAATTTTAAGCTT
TTGAAAAGCAAAAATATAATGTGTAAAAACTTTGTCTGACTTTGAAGTTT
TTTATCCATATTTGCCAAAAGCTTCTTGATTTATTTCCATATTCCAAAGT
CAAGACAAAGTTTAAACTTTTATATGGGTTTGATCCTTAAGTCTATGCCG
TGCAAAATTGAATGTTCTTTTCCTCGGTTAATTTGGTAATGTTCTGTAAA
AATATTTTGCATGAAAAACAGGCTGATTATTTCAAAAAGTTTAGAAACAT
TTAAAAAACATTTAAGGCACTAAAGGCAGATTTCTTAAGAAACATTGAGG
CTGCTTGGTAAAACTAGTTTCTTAAAAAATAACGTGTATGTCCTGTACCA
AGAGTAGCATAACAAGCATGCAAAGCCTCTCTCACGAGACCATATGATAC
TGTCTCAAATCGTCTGATAATTTGTAGAAAACCTAAAAGCAGAATGGGAA
TAAAATAAAACTGTTACCAATTAACAATCAAATCTTTCACCATAGGTTTC
CACCACGAGCAGTCACGTCCTGACAGAGACAACCACGTCACCATTTTATT
CCACAACGTCGCCCGGGGAACGGAACATAATTTCAAGAAACAATCATACT
CTACAACTGACTCAAAGGTAATTCATACAGGAGATAATTTTGAAAGTGAA
AATACTGTATATTGAATAAGTTGTTAAATACCTGGAACCTGAATTACCTT
ACCTTTACTAACCATCTGAGTGAAAAGACTAATATGTTGAAAATGAAACA
ACTTACTATGAAAGCCACAGTATAGAGTCTCCATAACTCGAACATCTTCA
ACTCGAATAACTATCCTTAACTCGAACATGGTTTCTCACAGCTTCAGATA
ACAAATCCATCTCAACAAGTCTACGTAACTCGAAATTTCCATAATTCAAA
CAACTTTGTCATAAAAAATGTTTCTATTATACACATAACTACAATCAGTT
CCAAAATACTCGGAACAAAAGGGAAATTCCCCAAGAAATTTTTTAACTAC
AAACAATTTGGAAGAGCTCTAAATTAGATTGGAAGGATAGAGTTTTAACT
CTGAGTTTTAACACCAGACTTAGGACCTAAGGATCTGGGGATCCAAAAGT
TCAAATATGGCCTGGTTGGGCATGAAATATAGCCTAGAAACCAATAAATC
CCTCCCAGATCGAAATATTCGATGAAATCAAGTTGAAGGCCCGAAATTGA
AATTCTCACTCGAATTTAAATTTTCGAAAAATTGTAAAGTAGCTAAAATT
GCCAATATGTTATGGCACTGATTGTAGATTAACCTTCGGGAATCAATACG
AATTTTATCTTCAAAATTTTCAATAACTTTTTATTAACAGGGCACTCCAT
ACGATTACAGATCAATGATGCATTACTCATGGGACGCATTCGGTTCCGGC
AAAATGACCATTCAGACAAAAGATCCCAGCATGCAATACGAGATCGGTAT
TGGACAAGGCGATCAGGGATTCAGTGACATTGATATCAAACAATTGAATT
TACTCTACGGATGTTGTAAGTTTTTTCAGTTATAATCTTAGACTGGCACA
CCAGTCGGGCTGGAACAGTATCAGGCGGGAAAAGTGAGTGTAGGAGTTAG
GTAACCGTAGGCAGAAATTTTGTCGGCGGCAAGGGCTGAATGTTAATCAG
CAGCCTCTCACCGACTTTTGCTCGTTCTCCTACGCAGCTCCTATTCTAGC
AGACGCTAACCGCCTTTATGTTCCCGCCCTCTGACATGATTAATTAACAG
ACTAGTTTTCTAGTCTATTATAATCTATCATCGACCATTATGTTTTTTTT
AAAACCTACCTAATAAGTTAGTACCTTACAGTTACACTTTCCAAATTCTT
TTTTCTTAAACTAATTTGACAAGGGTTATCAGCGAAAAAAAAACGAAAAC
AGCAATTAACTTCCCAAAACAAAGTTGATATCGTAGGCTCTAACCTTTTT
CACACTGCTCAATTTCAGTTGGTTACTAATTTTTTTTCGCACTGAAAAAT
CCACATTGAATACTAAGGTTGGCTACACATTCAATAGAAGCTCTCCTGAA
TTAATGATTTTCATTATTTTAGCACAAAGCAACGAAAGATTACCACCCTA
CACACCACCATCCAAAGGTTCGTTTCTCGTAAATCTAAAGTCGTTGTTAG
GGGGGTGCGTACGGGGTTTGCGATTTCCGAAATACTGAATAATTTTAACG
AAATTTCCGAGATCCCGTAAAAAAATACTTGCAATTCCGATACCAATTTT
GACTAATTTTTCATCAAATTTGGTTTTTCATGTATGTAAATTCCGAAAAA
AAAGCTTNGGGGGGGGGGGGGGGGGCGATTTCCGAAATACCGAATAATTT
TACCAAAAGTTCCGAAATCCCGTAAAAAAACACCTGCGATTCCGATACCG
ATTTTGACTAATTTTTCATCAAATTTGATTTTTCATGTATAAATTCCGAA
ATTTCGAAGCAAAAGTTCATGGATTTCCGATACCGAAACAATTTCACAAT
TCTGAAANTAACGATTTTCATTTTTTTAGCACAAAGCAACGAAAGATTAC
CACCCTACACACCACCATCCAAAGGTTCGTTTCTCGTAAATCTAAAGTCG
TTGTTAGGGGGGTGCGTACGGGGTTTGCGATTTCCGAAATACTGAATAAT
TTTAACGAAATTTCCGAGATCCCGTAAAAAAATACTTGCAATTCCGATAC
CAATTTTGACTAATTTTTCATCAAATTTGGTTTTTCATGTATGTAAATTC
CGAAAAAAACGCTTTTTTATAAGAACAGTTCCATAAGAACAGTTTCAAAT
GAACGCATGAAACTCAACTGTTTGCCAAAATTCTAAAAATTTATCAAGAA
TAATCCAAACCTCAGATTAAACTAGAGAATACAGGTTTTAAGCCCCCCCC
CCATTTAGTCAACCTATTAAGAACAATTTATCTACTGCTTCTTGTGAAAT
GCAGTAATGTTTAGTCCATGCAATGACATTTCTGACTTCAAGTTGTTCTT
AAAGGCGAAGTAAATGTGACATACACGTTTTTTATAAGAATGGTGTAAAT
CCATTTCATCATGGATATTCTTAACTTTTTTGGGAAAATCATCCAAAAAT
ATTCTTAAGCATTCTTAGGTTAGGATCCAAATTCACACTAGATTTAACAT
TTAGTACATACGTCTCAAGCATAAAATGGCATTTTTGTGAAAGAAGTGAG
CCTTACTTGTGGGTAATTGGCAATTTATAATTGAAAATGCTCTAAAAATG
ACATTCTTAGCTTGAGTAGAAAAATTCCATGATGGTGGATATTCTTCGCA
GTATTCTTAATTATTTAGCTATTTTCATCATGGGCATTCTTATAAAGTGT
ATTCTTATTAAAAAAAGCATGTAGTCTCATGGAATAATCTTAGCTCTTAA
ATCTTTTACAATACAGATTGTCACGATTTGAGAGGCTGTGCTTCACAAGT
CCACGAAGGAAATTGTCAATCAAGTTCTTGGCAAACTTACCTTCGAAAAC
ATTGTAGAAAGAGCTGTGGATTCTGTAAAGTTACTGGAGGACCAAATACG
CCAAAACCATGGACACCCGGACCTGATACACCACGCCCAAACACGCCCAA
ACCATGGACACCAAAACCAGACACGCCACGCCCTGGAAGTAAGGGTTCTC
TTTAGCCTGCTATTCAGTTTGACAAACCTAAAACAAATCTTAGGTACTTT
ACTCGGGCCCCGTACTTTACTCGTGTAATCTACTTCAGGCACCATTTCTA
AAGAAACTTTTTTGACTTACTTTTAAACTTTGAGTATATGAATAAAAATA
GGCTCAACTTTAGTATTTTTTAATCATTTTGTAGACCTAATTGTAAAACT
GATAAGCGAAGTCCAATAAAAAAGCCTCATTTTGATGAAAAACTCGTTCC
CAGGTCCCAAAAAATCTCAATTTTCAAAAATGAAAAAAAACACCCTCAGA
TATTCACTCCAACAGGTGGGCCAAATTTCAGCCGAAACCCAATCATTTTT
GAAGTCTCAAGTCTACCCCAAAGCTTCAGTCTCGTTTTGGAGATAAAACT
CATGACCACGCCCTTAAAAATGAATGTTTTGTAAAAGTGAAAAATCCAAC
CATTTTTGAAGTCTCCAGCCTACCCCAAAGTTTTCGGACAGACATACAGA
TTCTAGCTCAACTGAAGTTGAGAAATAATAAAATAAATAGATTCAATTTA
TTCCAATGATGTATATCTTAAACTTTCAGATTGTTACGACCGTGTGATTG
ATTGTTACAAATTGGGACGACACCAATGCAACAGTTCCAGTTCTGCATGG
AGAAATTACATGCGACGTAGCTGCAGACGTTATTGTAACCTTTGTTAAAA
GATTCTAAATTGAAAAA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00056620TCONS_00056620Clytia hemisphaericatranscript
TCONS_00056619TCONS_00056619Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00056619-proteinTCONS_00056619-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_277supercontigscaffold_277:394283..402649 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.58	0.34	0.21	0.18	0.43	0.61	3.26	3.73	2.47	3.12	4.4	0.9	66.95	83.31	0.28	0.33	2.88	3.37	386.53	436.86	46.1	44.71	74.5	66.72	207.81	213.14	0.22	0	1.46	1.36