XLOC_035748 (gene) - C. hemisphaerica

Overview
NameXLOC_035748
Unique NameXLOC_035748
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_282:295680..300816+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_035748 ID=XLOC_035748|Name=XLOC_035748|organism=Clytia hemisphaerica|type=gene|length=5137bp|location=Sequence derived from alignment at scaffold_282:295680..300816+ (Clytia hemisphaerica)
TATAAAAAGAAAAGCTAAGCATCGTTGTACTCATATTTAAGTAAAAGAGC ATAGTAGTGCAACGCGAGAGGGTATAAGGGTACTAACACAGTGGGACAGC GAACCCTACAAAAAAGACTAACCATCAATTGATATTCTCGCATAAAGAAG TACATACTACATACACAAAAGAAacaacattttgattttgaatacaCACG ACAGACTGAGTGGACAAGGAAGCTTCATTTTACGTGATACATTTTGAACT ACAAGGATTATTAGACCAACAAAATAATAATCGAGACGAGACAAAATCTG AAGAGCTTGAAGGATTTATGTATGGTTTTTTATCGCGCAAGATTACTATC ACATCTTAAATCTTGATTTTACTATTAACATCATCTTTCGAACCTTAAAA TctttaaactaaaaaaaatgattGGCTTTGGAATGAAAACGAGGTTGGCA ATCATCTACTGCGCATGCGTTCTATTCTCTTTATTTGGTGCATGCTCCAA CGTCGAATTAAAAATGTAAGTCCTGCATGTCTGGTTAAATTTTCATCATA TTTTTAatacctgtcaaaatttgaccGCAGGTTCGTTTGTATATTATATC ATTAAGGTTTACATGATTTTGCGTAATTAGCGCACTTTTGTTTGTAATTA TTTCAGGGATGGTCGTGGTGTTAAATAATAGAATTGACTGAAAGCTGACC AGGAAAGGGGAGATTAGGCTCATAAAGCACCTTAAAACATCTgatcgaaa tcatcaaaattcaaatatttttgttttttacagGAACGATATTGAATCAA TGAACCCATACGTTCTCTGTAGTTCCATTCCAAAATACATCAAGAAAGGA ACGAATCTCAAATGTTCAATGGAGAAACAAAAATTGACCAACGTTTACCG TGGTATTCGAGTTGCAGCCAAAGAATGTCGATATCAATTTCAGATGAGAC CGTGGAATTGTTCAGCTGCTTTCGAATCTGCACCAAGGATCACCTATTAT CGTGAGTACAGACATTTTTTTGAGTTCTTAAAATCTTTCTCAAACATCGG CGTAGATACAAGTAAACCAAACTAAAACCATTTGGTAGAATGTGACTAGT AGGATTTGAGGTTCCTTGCACTTCCCGTGGAACCTgaaaaaaatgtcata ttttttGGTTTTCTGTAAATCGAAGGCTTTTAGGAAGAATTAATCAAACA ATACTAAATCACTCCATTGTATCTAAACTTCAAGAAGTGAGACATTTTCG CGCCGGAATGTTGTTTTTCGTCTAAGCATGAGGACTGAAATCTAATTAAC CCGGGGATGTTATCGGAATTGCGGCAACAGTAATTCAGTACGaaggaatt caaaaattttataggAAGGATGTAAGCCCATCTGTACAATTtggtgaaaa caatcgaaaactcTTCGCCTTAGCGACTATGAAGCAAATAAGCAggaaaa caacacaaaaaggaGAGAATAGAgaaatagtttgaaaattgaGCAAAATT TGTTCTATTTCCGCGCAACTAATTTCCCATCTCATTTACtaatttgaaaa tatgtgaAGTTAAGTGGTAGactaatttcaaattaaaagaaaaattaatt aagaGTAATTTATGCGATAATTACCCTCATTGATAGAGCGTTTACCAATT GCCAACAGAAATCCACAACTTAATATCTGTATACACCAAAAGCTTAACAC TCATATTGAATTCTTAAAACCATACAATTAAAGGGTATCAGCTCAGATAT AGTTAACCTGTTTCGAAGGATTTAATGATCCTATTATTGGATTAAGCACT GAGTCAAAATCTTCTACAACTTGTTAAGGAAACTCAACCTTTGATACAAC TTCTAAATCGTCTCCAATACGGGAAGTCAACAATCGAACTGTGATTCTTC CCAACTAACCAGATTCCACCAAACCCAAAACCTTCACCGCTTTTATGCCA GCAAATGATAAGATACAGATGACCTAAACTAGATGCTTGTTAGACTAGTA ACCCTACTGTGGCGTTCGTAAAACAAGAGGATTAGGGAAATAGGCtattt ataattgaaaagacATAAACGAATAATAAAGATTATCCTTATTGAGAATT TTGTAAacagaattttttaaagaatttgaaTATGACCAGCTTAAGCTTAC ACAGCTAGCCAGCTATAAACATTGCATCGTTTCGCAATAAATTTTTAGTA AACTTGACACTGAGAATAAGTcagtttaaaaatcaatttgataAAAACTC TTTATCATATATCTTTAAGATTAATAATCTTAATTCGACATTTCAAGTCA TGTTTTAAAAACTATAGATTTGAAAtgtatgacgtcatcaaaactggTGT CAAATACATAAGTACTCCTCCCTTCAGCAGGAAAACTTTGAGAAGCTCAA AAGTGGGGATCACANATTACGTCATCAAAACTGGCGTCAAATATATAAGT GCTCCTCCCTTCAGCAGGAAAACTTTGAGAAGCTCAAAAGTGGGGATCAC AGAATGACCCACCTATAACTTGAAACATCTGTTAACGCTACAAGACgcta ttagaaaaaaaaatcgaagaaaaaaataagcctgagaaaattttaatgtt ttatgcTGAGGTTTGCAAAAAATGGTTTGACACACCTGAAAGGCTATATC CCTGTATCGTATGTAAAATCGATTCATTAAGTATGTCAGAGAGAGGATCA GCATGAAAATCGCCTCCTCCTTCTAAAGACAGCAGAGCGAGaaaaaaaac tggaaatttcTCCTACGCAGCAAAATTTCACCCAAATTTGTCACAGTCAG GCTTTTAAAAATTCATAGTATCATTCATGACCATTTAAGTATAAAAATCA CATGCTATGTTCAACAGGTCACAGAACTGAGATAAGAAAGTAGCATTTTG TTGATGAACAGGGATTTATTGACCACCTACAGAGCTTTCTTGTACCTACA AAAcagatttaaaaacattttggaCAGATTCCAAAATGATTCAATACTCT AAGCTTTCACTTTAACTAATGGCTAGATTGTACACATTATAACATGTTAT GTATATTTATCCTCCAAACTAACAAACATTCAATTTCATATTTACAGCTA TCCCTGAAACTGCATTCTTGTATGCCATCAATTCAGCCGGCATCGCTTAC TCCTTGGCGTGGGCGTGTTACGAAGGCAAAACAAAAGACTGTATGTGTGA AAAACAAAAATCGGTAAACATCACAACcgaaacattacttaaacatcaAG CCAATCAGAAATCCCCGGAACAACCGCATATAATGGAGGACCGTAAATGC GCGAAACACAGTTTACAATATGGAATTGAAGAATCAATGCAATTGTTGGA AAACAAACATGAGAACGATATCCGATGGCGAATGGATAACCATAATAAAC AAGCTGGACGATTGGTGAGTTTCTTTTCCCATAATTCAATGCGCTGAATG GGATAGGATTCTGGGTAATAAGCAAAGAGTGATACATCTAGTTAAAGGCA ATATCAGAGAGTTGAGGATATTTCTTTCCTTAGTTCTTAACGAGATGTcg aaatattttcataattacTTAGAAATTTGTATAACTGCCATATTTTATCA AACAGGGGTaattaaatattttggttttaagtCCAGCCCAGAAAATTAGA TTGTTGTTATACAGTCATTGTGGAAATCTAAACAGTTCTCTATCTATCAA ATTAACTGATGCTAGACGTTCCAGAAATATTGTTTTGTCTAGAAAGTTCA CGATAGCAAATCTTGTTGGAAATACCAtatataatgatttttttctcgtG TGTTTAGGCTCTTATCGATGGACCAATCAACAAGAATCGAGTATGCAGCT GTCACGGTGTATCTGGAGCTTGTACTATTTCAAAATGTACATTGAAATTA CCGAAATTTGGTGATGTTTCAGATTATCTAATGGAGAAATATAAATCAGC CGTCCGAATGGGTTCCAATAACCATGGACACTTGATCCCACATCGAGACA CTTTGAACAAAAAACCAACAGAGAATGATTTAGTCTACTTACAAGAGAGT CCAAGTTTTTGCTCTAAGGACAAAAAATATGGTATTCTGGGCACCAAAGA TCGTGTTTGCGACCCGAAGAGTAAAGGACCTCAAGGTTGTGATGTCTTGT GTTGCAATCGTGGGTCAGAGAAAATTGTAGAAGTTGAAAAACGACAATGT AAATGTAAGTTTAAGTATTGCTGTGAAGTGAAATGTCAAACATGTGAAAA ACGAGTAGAATTAGATGTCTGCAAATAGGTGACGAGATTGagtaaagatg gcggagaagttGTGAATCCAAGATGCGGGATGAAGTAGCGAAGTGATAGC AAAGACTTCACTAACAAGTAAATCATTGAACGGGAATCATTTCGGATGCA GCTCTCTATAAAACTCAAGAACgtgtttttgaagaattttatcATACCGT TCAATGTCAATTCATTGGGTAAATGAAGACTCGGGCGTTGGGCgtacaaa acaaagaaaaggacATGTAATCATAGCTTTATCAGAAAAAAGAagtttat attatttattacagaaacaaattattatttttttaattgatatttataat tttgatattttatatgGAATATTTTTATCATACCCACAAAGCTTAAATTG CTTAAATCAGCGCGAAGCTTTCGaaaattaaaatagaaattgcaTCATGG CATTACTTATTTTGATTTAATAAAATCCAAAATTAATCGTGATTTTGATG AGAGATTTTAGCATCTTTTTGTGAACAATAATACCGACTTTTTCACGTAT TAAttcaaattagattttttagTGCATCAGCAACAATCtcataaaattta gtaaaactctcaaaacaaaaaatctactTCAACCCGATGTTTTGATTTAG GAAGCTATGCTTTTTAAACTTATTAAGGACTTGAGGTTTTCTGGTTAAGA AAATGTCCTTAACACGCAGGATTTAGTTTAGACTGGGTAAGAAGAATGAA GTCTTTGTAAACAAAAACTTATACCGAAAAAAGagcttttaatttaattt ataacCCAAGAACtgtaaaaaagatattttattaATATTGACCGTGTAGT ATTTATTGAatagaacaaaaacaaaaataaaatcata
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00056741TCONS_00056741Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
unclassified Wnt ligand 9TCONS_00056741-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_282supercontigscaffold_282:295680..300816 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0 0.02 0.02 0.02 39.95 27.6 13.3 16.23 6.36 22.46 1.59 3.03 9.46 7.65 1.37 1.46 18.56 15.06 22.58 18.83 7.19 9.04 2.17 2.35 5.65 3.37 48.71 25.52 0.51 0.22