XLOC_035763 (gene) - C. hemisphaerica

Overview
NameXLOC_035763
Unique NameXLOC_035763
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_282:316488..323215-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_035763 ID=XLOC_035763|Name=XLOC_035763|organism=Clytia hemisphaerica|type=gene|length=6728bp|location=Sequence derived from alignment at scaffold_282:316488..323215- (Clytia hemisphaerica)
CACTCTAAAATTTGATGTCATTCTTTTTTTTCAGATTTTGGCGCATTTGA ACGTATTTTGTGTGTTATTATGTTTGGCGATGGGGCATTCTTATCAATAT TATTTTCTGACGCCACTCGTCACTTTTTGGTTCTTTGTGGTCTACGTCAC CATGGCATTGTTTCCAAGGGTTACCAGCAATATCGTCGAAGGTACATACT TCATCTGTTACTTTTAAAACAGGAAAACTTATTCGTGGAGAATTCTTCGT CGTTTAAAATTTAATTCTTTGTCACTCTTTTGAAAATCTTTGTCACAGTT TCCTTGAAGTTGACCAGAAAGTGTTTTCGCCTAAGAAACTTCTTGGTTAA AAGTTTTATTACTTTTCCCCGACAATCTCCACTTCCCCCTGTACGCATTT TTGGACCTACCTCCGGGTGCCCCGGTGGAGGTTCTATAAATTAACCCATG TCCGTTCGTTCGTTCGTTCGTCCGTCTGTCTGTTACCAGCTTTTCTCAGG ATTGGCTCATTAGTTTTTTCTGATTTTTTGCACAATGATGCAAAATGGCA ATGCCCAGAACGTGACGGAGCCCGATTTTTGAGAGAAAATTTATTTGGGC AAATTTTGGCCAAAAACTACCTAAAAATAGGGTTTTTTGGACTTTCTACA AAATCCTGTCATATCTTTTTTCTGATTTTTTGTACAAAGATGGAGGGCAA GATTCTCTAAAGAATGGCTGAAGTGGTTTTTCCCGGAAAATTCTTATTCG CCTTAAAAAACGGATTTTCGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNAAAATCCTGTCATTACTTTTTTCTGATTTTTTGTACAAA GATGGAGGGCAAGATTCTTTAAAGAATGGCTGAAGTGGTTTTTCCTGGAA AATTCTTATTCGCCCTAAAAGACGGATTTTCGTATTTTGAGGAAATTCCC TTTCCAAATAAGAAAATATAGCTTTTCTCAATGTTGACTCATAATTTTTT TCTGATTTTTTGCACAATGATGCAAAATGACAGCACGAACTTTTTTTCAA AAGGCACGAACTTTTTTTTCAAAGGCACGAAGGGCACGAAGGCACGAAAG GCACGAACAAAATCACACTCTTGCACAATGATGCAAAATGACAATGCCCA AAATGGGACGGAGCCAGATTTTCAAGGAAAATTTTTTTGGGCAAATTTGG GCCAAAAACAGCTTAAATGGTTTTTTGGGTCTGAATGGTTTAAGTGATTT TCGTATTTGGGGACATTCCTTTTTACCATTTTACATTATTCAACACACAA GCTTTATTTTTCCATTCTGAATTTTTGTACAATTATTGTCAATTTTTTCT TATTTTCATCTGATGTTAATCATTAGGTAGGTCCATTCAGCATGTTGCTT GTTTGTTTTTATGTGCTGTTTTATAACCTATCTTACCCACTGACGTAATA GCGAATTCAAGTCTAAAAATTGTAAACCGAACAAAGAGCGGTTCATAGAG CCCCATGTGCTCGCCTGCGAACTTGTATAGCCTTAATGTTTATTTATTAA GTCTATTTTACTAATCTTTCTGAAGCGGAGACAGTTTGTTTTAAATTTGT CTAGACGTGACCGATTGAGCCTAGCGGTTTTGCAGATCAAAACTGCGGGT TATTCTAAATCGTCAGTCACTCCATCGTCCTAAAAAAACAGATACATATG TCTTACTAATCTTTTTACTTACTGAAGTGTAGCCCAAGACAGGTTTTCTG TACTCGTTAGTGTTCTCCTGTCTCCATTTCACAGGTGGCTGTTTTTAAAT GGTGTAGTATTCTAAATTCTTGATAAGTGATTTCTAGACTTTTGTTTCTT CTTTTTTCAGAGAATCCAAAGCGGTTGTTTTTGATGGCCGGAAAATTGGT CATTCTCTTTGTATTTGTTTTTGTTGTTTGGGCACACGAGGTATGATTCC TTTTCAATTTAAAGGTTACGTTGCAGACCTCAGGTTTTTCATGTCACGTA GCTCTCAACACTAGCGAGTTTATGTATCTGGAATTCTCTACGGCTACGGT TGAAGTGGCGAGGGTAATGGCGAGTAAGGCAAGTAATGGCGGGTGAAAGC AAGTTCGATATTTGACGTACGACATTATGTCGACTTTGCTTCTACGGTTT TTTGGCGTTTTTCCCGTACAAAGCAAAGTAGACAACGACATGTCGCCTTT GGTGACGACCCGTACGGAAAGCCCCGCAACCGTAGCCGTAGAATATCTCC GATACATAATCTCGCTATTGCCGAGTTTATGTATGTGTCTTTTTTAGCGA TGGAGACGGTAAGGTTCTAATTTGTCTATATCCTACCCAGCCGAGGACGA AGGTAAATCAGTATTTTTACCGTCCTCGATTTTGCGGGTCAGAACTGCGG GTTATTCCTAATCGCTTTAGTCACTTTACCGTCCTCAAAAGTGCATATAC ATAAACTCGCTATTATGAAAGCAAAGGTTCGATTTGCGTAAGGGGTCGCC TCTACAGAGAACGTTTGCTTCCATAATTGCGGAACTTAACCAAATATGAA AAACCTTTATAAGAGGTTCGAAACACAACGATACAACACTGGAAAAAGAT TCCATTTGCCCTTGAGAAACGTTTTGAAGGAGAAAATTCCGATTGTTTTT TTTTCAAACCTTCATAATCAACTTTCGGCTTTGTAAATCCATTCTCTGAT AATTTCTTTGTTTCATTTTGAAGAATGTTTGCGATTGGTTGTTTTCGAGA ATTGTCATCAAAGAGCTCTTTGTAGATGTCAATGGATCTGTTGAAAAATG GCGTATCCATTCAGGTCTCCACCGATATGTAAGTTTCCTTTCAAAGAAAG AATTTTCAACGTTCAGGGAAAAGTCCCTGATCTTACCTATTTTCATCAAA ATGTGAGTCTTTTTTCAGTTTTGCACTTTTTTTGCACTTTTTTGAAAAAT ATTCAGAATTTTAAGCGAATTTCATGCCTCTTGGTTATAACTTATCCTTA TAATTTCAAAACATAACTGAAAAAAAATTATATTTCAAGTTAAATCAATC ACAAGTGCCTTGCTCTTGTAATCGATAAACATTTTTACCTTATTTTTGTA ATTTCCAGGCTGTAATATTCGGTATGCTTTGCGGATACATATATGTCAAT CTGAAGAGATTAGACCTGATCAAAGATACTGATAATGATGGCAATATATT ACCGTCAACTAAGTATACTATTGCAACCATGGTTGTGGCACTGTGCGCCC TCCTGGTGAGTTTGTGCAGCCTTTTTCTCTGAACGTTTCTAACAAGAAGG AAATCAACTCGTCATCTCTTGATTTTCAGTACATTCGAAAACTGAAAAGT TAAATTTCTATTAAGAGCCATTTCAATGTTGAAGGGAAAAATGAGAACAA CATTTGTAACTTTTTAAGTAAAAGCTTTTCGGTGTATAACCATCACCAGT GCTATTAGATAGTAGCTTTTGTTGTTTTCATTTCTTACCTTTTTCGAAAA ATGCTTTTTGCCTTTCAAAGTACAAATGACTGGTTCCTGTTACGTTTTGA GCTTCATTGTCAGATCCCTCGTAAAACTTTGTGAAGGCCCTCACTGGGAA GAATTAGTACTAGTACACACTTTTTGAATTCTTTGAAAATAAATCTATGT CTTTCAACTTTTAGGGTTATGAGATACAAGCTTTTACATGTCATTCAAAA AGCCTTTGTGATCACACTCACTCCATAGCATCTTGTGTGCCGGTAGGTTA TTGTTCTTTAGTAAGGTGAAATCTATATTGTTTGACCTTGTTCGCTTTTT CTGCTTATTTCTACTAATACTTTGTTTCAGTATTAAGGTCCTTTTAGAAC TGTTGACCTAGGGGTTCTAAAATTCATTTCTCTGAGTTTTTCAGTATCAA ATTTAGTCTCCATGGATAACGTGTTAATTTGACAATGAAAAATGAACTGT TGGCAAAATGCAGCATCAATTTTTTTTCATCAATATTCTATTCGAATCTT TTAGATTTTGGCATTTGTGTTGCTTAGAAATTTACCAGGTTTTCTGAGGA CAAGATACAGTTTACTTTTCGCCTGGATTGGTGACATGTCACTCGAAGTA AGTGAAACACTTTCGTCTTTAGAATAAGTTTTATATCTGCCCCTTTATCC GTGATGTAGTGTTACTTACTTGGTAGAGGGTAACATAATGAATGAGCGAA ATGATATTAAGTATTGGACGAGGAACAACTTTCTTTCAACCTATGATACG ACAGATCTGCCAAATGAACTGCCCATGTGTATACTTAATCATTACAATAT ACAAGGGAGGATTCTTGAAAGTGGTATCGGTGTTTAGTTTTCTTTTCACC TGCAAAGGCGAAGATGTTTTATCTTGAAAACCTTTTTTTTAGAATTTTTT CTTTTCAACTGTAGTTTAACTTTGAAATCTTAATCATTCGATATTCACAT TTCTACAATAACATTTCTTCCCTGCTCACGAGATTTTTTCTGATAAATGT GTTATTATTTTTCTTAGCTTTTCATTGGTCAGTACCATATTTGGTTGAGC AATGATGGATTCGGTGTTCACGTTCTCATCCCTGGTTTTCCCACACTCAA CGCCATCGTTACCACGTTCACATTCGTGTGTACGATACACGAAGTCAAAC AACTCTGCTCAACACTTGCTGACTTGTTGGTCACAAAGGATGTCCGGATC ATGCTGAGAAGGCTTATCATTTTCATCATTTTAATGTTTATTGTTTGGTG GCATAAAACACATGAAAAGAAACCCGTATTTTACGTTTGATGATTTGGTT GGTTGGTTCGTTTCAATCTTATTCTCTGGCTTAGACGTGGGCAGAAAGTT GACAGTCTTTAATTAAAAAAGATTGAAAGAAAGATTGAATTGACGACAAA AGAGGGCAATGCATTGACTTTAGACAGCCAACTTTCTCTCCACTTTAATT CAAGAGGTAAGGTGAAAAGTGGCCTGTCTAATAAACAGAGTTAACACTAC TATGATTAGTTTGGGCTCGAGTCTATCAATCATGCTTAAATTTGTGAAGT CATTGTATTGACGTGACAATACCTTACTGTAATTATCGATTACGTTTTTT AGTTTTTGAGAAGTTTGACTGAAGTTCTTCACAACCGGGATATATCCCAA CTTATCTTTCCCGAAAATGTGAAAATTTGACCCTTGTAGATTCAAACCTA GTCCCCTTCAGAATGATTGATAAAAATATTTTGAAAATACTCGTGGATTT TATGGTCCTTGACTTGGAAATGTTACTCAACTAAAACCGATACCTAGTTT TGAAAGATTCGCATTTTAACTACGGGTAGTAAGGGCAAAGCTTCGTTGGG GAAAAGTCCCGACGTGCCTCTGATGTAGATTGTTCAGATATTGTCAATTT CTTTTGAGGAAAAGTCCCTAGATAAAATTAAGTCTTATCCTGTTCATGGC AGTGCATGGCGAAAAAGTGTGAAGCAAGGAACTACCATTTAATGACTAAA AAAACTCTGTAAAATAGCTATCCCTCGTCACATCATGAAGTCAAATTCCT TTTATTTTTTAAAAACCACTTTTCGTCCGTTTTCAACTTAGAATAGACAA AAATGTCAACCCTATATTCATTCATTCTGAGAGCCATGTACTGTTATGTT TTATGTTTGAATTGGCAAATCATTTTATTATTCAAAATGCAGAATTTTAT TCACATGTAAATACAAAGATGCAATTGTGTATTGCGTACGTAACAATTAA ATTACTTTTTAATTTTCATTGTTAATGAACTATAGTTATTTTGTGTTTTT TTTTTTGTAGATTTTTAAATGAAATAGACGATTTAATTTTTGTGTTAAAT TTAAATTTACCTCGATTAGAATTTCTATTGATTTAACTCCGCGAATTTAA GGCATAAAAGGCATAAAAGCTTGTTTTCGGAAAGTACTTAACAGTTAAAC TGTTCATCACGAAATCATATTCCGACTTGTGCCGACCAATTGCGATTCTA TTCAGCGCGCAATCAACGCAAAGAAAAG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00056780TCONS_00056780Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00056780-proteinTCONS_00056780-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_282supercontigscaffold_282:316488..323215 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
5.6 5.3 2.82 2.76 20.88 15.07 20.57 21.18 14.81 15.7 17.5 13.8 13.13 14.25 11.4 13.71 11.18 11.39 10.83 12.77 10.38 9.23 8.25 9.45 23.15 23.37 8.46 6.81 9.69 7.3