XLOC_035854 (gene) - C. hemisphaerica

Overview
NameXLOC_035854
Unique NameXLOC_035854
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_284:51847..58634-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_035854 ID=XLOC_035854|Name=XLOC_035854|organism=Clytia hemisphaerica|type=gene|length=6788bp|location=Sequence derived from alignment at scaffold_284:51847..58634- (Clytia hemisphaerica)
GAATTTTAAGCGTACACAGATTTACAGACTTTTCTTATCATGATGATAAC TAGCAACTTTGGGGTTTTTTTCTTAGGAATTGTCACGTTTTTCTTCAAAA ACTTACTTTCCAGTAATGTGCAGTCAGCATGGAGTGATGTTGGAAGGTTG AGTTTGACACCAACAATATGGACAGTAAGCTTTTTAATTTTATGTCTTTT TTTCTTAATTCTCTACTTTTTCCTTTGGGCTATAAACCCAATGTCCAAAG TCAGCTTAGCCTACACCCTTTTAACCTAAGATTACACTTTTTCTTTCATT CCGACCCTTACAGTTACAGTGCACTTTGGTTAATCTAATACCTTATCGGG GAAAACTTCGTCGGGGAAAATTTTTGTCGGGGAAAAATATTCGTCACTTG GCCAAAATTTCGTCACTTTTCCCCGACGAAGTTTTCCCCGATAAGGTAAC AGCTGTTCGTAATTTTCTTACGCGCACGGTAAACTTCTGAAGGCGCTTGA AAATTATACAGCTGAGGAAAATAGTCCTCCGCGGAAAATTCTACAACAAC AATCTTGTTGTGTGCCGGAAAAATAAAAACTGATACGGTGTCCTATTCAT AAGCACAATCACGCAACTTTGTTGTCGTTCCTAGTCCTTTTAGACGAGCG CAGTCCTTACGATTCCGAGATTGCATATTCGTCAGATTGTTATGTTTTCA CCATCCCTTTAGAGCTTCAGCGTAGTGTGCAGAAAACATTCACAATCTGA TTTTAGGTTAATTTTGGTAGAGTTTTCAGCCTGAAAATGTACCCTTAAGG TCGCTCACCTTGAGTGCACACCTCCACTCTAAGTTAGCTCTAATACGTGA AGAGCTTTTTCTGTTTTCCCCATTTTAACGAGTTCCCCCCAGCGGTTTGC GTGATGGCGTGATTGGGACTTTTTTCTTGTATGATGGCGTGATTAGAGAT TTTTTGGCGTGATGGCGTGATATGGCTAAAATTTGAGGCGTGATGCATGG TCTGGGCTATTTTTCGCTATTTTTTGCGTGATGACAAATTTCAGCAATTT TCGTGATGCGTGATGGAGAACATTTTTTTGCGTGATGTTGTGACTAGGGG TGCCGCTGGGGGGCGGGGGCTCTTTAATAGCCGTCTCACAGCCCCAGTGA AACTTTTTCCCACAATGGGGATAAAAGATATTCTATTTTTCAAAGGTTGA AAAATCCAGTGAGGATGATTTTTGAGTGCAATTTTTAGGCATTGAATTTC GAATTGGGATGCAATCAAAATTTCCTAGTGGGGCTGAAATTCTATTCTGG TATTTTTCCCGCCGGCGACCAAATTTTTGCCAAATTTTGTACTGTATGTG TATTTTATTGCAATGCACTCTTGTTGAACCTTTTTCAGAAATTCCATATA CAGTATTCTGTCTGAATTCGATGTCATACTTGTCAATATTCGTCATATAA ATTACATACATAATGCTTGCAATGTGAATTTTTATGTGGCAAATTTTAAT GACTTCCTAGTATTTCAGTATTTAGCTTACTCTTCAAAAACTTTATTTTT TTATTAGAACAAACTATAAGAACTTAAGAAATCGATGGCCATTCAAAATG TTAAGAACAAGCTAAGAACATTTTAAGGCTTTTCAAACTCTAAAACAACC ATTTTCTTAGGAAATGACACAAAAATACTCACAAAAAAAATAAAAATAAG AACATGGTAAGAACATTTCAGGCTTGAAACTCAAAAAGTTAACATTCGAA GGCTTTAAAAATTTTGGACGTTCTTTTAAAAAAACGTGTATCAGTTTCAA TAGATTTATTCTTATCGTTGGATAATTGTCCAACCGTTTGTCTGTTTTAT AATCATCATGGATCAATCGTTTCTCGTAATTAAATCTTTTTACGAAAAAG CTTACTGAAACACTTACACATTTTTTTCTATAAGAACATCTAAAATTGTT AAAGCCTTGGGATGTTCTTAACTTTTTTTTAAGAAATCTGGTGTCTTTTT TCCACAAAGCCTTAAAATGTTCTTAACTTGGTCTTAAGATCTTAACACAT TGCAGCGAAGGCTTATGTTCTTATATATTTGTTCTTATTTAAAAAAACTC CCTTGATACTTTCACCACTCTTAGCAGTTGGGAAAATACCCTGGAAAATT GACTTTGATTTCATCCCCATTTGAAATTCAATGTTTTAAAATTGCACTTC AAAACCATTCCCGCTGGATTGTTTTACCCTTGAACGATAGAATTTCTGAC CCCATATTGGAATTCATTATTTTTTTATTTTGGAAAATAAGAACATGTTA AGAACATTTTTAGATTTGAAACTTAAAAAGTTAAGAACATTGAAAATTAG AGCAAACTCGCCAAAGAGAGACAAATTATTAAGTGACATGATCTATCTAG TAGATTTAAGGCTGATTTAGAGATAAACTACCTTGCTAAAACATTCCAAA AGATTGCACATAGATATATGCGCAATAAATGTTCTTATTACTAATTCAAG TTAATTTCTTATACTAAAACCTCTACCAATATAATTTACATAAGCGTTGT TAATTGACATCCATCTCTCAGTTCATATAAGTGATAGCTAAGCAAAGATT TGAATATGTTTTTGATTGACCTTTGGATCAGATGTTGCTTACATGTCTGT ACACAATTATGAAAAGAGTGTTGTGGCATTTTATCTAGAAATTTTATTGA TTTATCCTCATTGAATTTTGTTAATAAAAATTTAGTTTCAAGTAGAAATC TAGAGGGTANAAATTTTATTGATTCTTCCTCATTGAATTTTGTTAATAAA AATTTAGTTTCAAGTAGAAATCTAGAGGGTAACTATCTTTGGGACAAGCT GGAGTTTTTACAAGCTCTTATTTGATTTGGTTGGTCGTTAACCAGTAATA AAACAATTTTGTTACTTTTTCTAAAGAATGTGTCATCTAGATCTTGATTC AAATGACCAATTAGTGAAGTATCTTGTAAAAACTCCATCCCGTCCCAATT CGTTCCATATGTTCTAATGAAATAAAGTCCAATATTTTTATTGGGTTTAT TGGGGTTAACAAGCCCGGGGAAGCACTTAGACAAAATTGGGTAAGGGGAC TTGCCGCTGGCCAGGGTGCCTTATTAGGCTCTGAAGATATCTGACAAGGT CCCAAATTTACTAATTTTCAAGTATTGTATCTGGCAGTGTGGAAATTAGA AGAAAATTCAGTTTCCTCTTTTTTTATCCACTTTTCAAACTGCAGCGGCA CGGCCCCGTCGATCGTTAAGTTCAGTATCTGCCATGCGAGGCTACAAGGC AGTTGCGGGATGTTTTTTTGCGCTATTAGAGAATTAGCGACGATCGCTTA GGTTAAAATCATGAGTGAAATAATTTTTTCAACTTTTTTTCTAGATTTAA ATTTTGCTGCAATGAATTTCGATGTGCTTGAAAGCGTCTACCAGACATTT CGCACCTCAAACAGCGCTGGAGACCTTCTAACCACATTTCTGAACGGTGA ATTCGAACGTCAGTTTGAGAACTCTGATGAGGTTGTAAAAAATTTCGTTA ACGACACATTACCGTGTATGATCAATATCACTCGTATTCATATCAATGAA ACGATGCGGGCCGTGACACAAAGTTTATGGACGAATTGGTAAGTTTTAGT ACGCGTTTTTATGAGAATAAACTATATAAGAACATGACTCTAAAGCACCA CTTCTAAAAAAATGGAATTAAACAATTAAGAGCATCTGAAGTCTTCAAAA ATTTTGAATGTTCTTATAAAAAACGTATTTATTAGTTTTGAGTTTTTTCA GAGCAAGATGTTTTGCTCAGTCGAAACCAAACGTCCGACTACTTTCGCGG GCAGAAACTTTCGCGTTTTTCGCGTTTTTGGCATTTTTTCACGGGAGTTT CTGCCAGGCAAGAAATTAAACAAGAAATTCGCGAAAGTTAATTTTGTGAA AAATTAAATTTTCTTAAAAATCGCGAAAGTTTTTCACAAGCCGAGGAGAG TCAATTTTATTGATATTATCGCAGTGACTAGGATTTGGAATGGGAGGAAG AAGTGCAAATAGTTTATTTTTCATTTATTAGAAGAAAAAAAAAATGAAAT TTGAAATAATTTTTTATTCACATTCCCTAGCCACTCTCGAAAGTTATTGC TACTAAGATTGAACATTCACAAGAAACTGCGGAAGTTTCTTCCACAAATT TTCTTCAAAAAGTAAAAATCGCAAAACTACCGCCCTTAAAGTAATGTTTT TTAAACGTTGAGAAAACGTTAGATGAAGGTAATATGAAAAATGCCCTGAA GCCATCATAAATGCTTGCATTTGCTTCACAGACAGAATACACCTATTCAA CCCTTAAAGGCGTGATTGGACTTTAAGGGGGTTATAATGAATTCATGTAG GCCAAATTTATTTCCCATGAGAATTTTGGCAACTAAAGTCTATTCACGAT AAGTGTGCACTCTTTTTTCATTTACCTATAACTTTTGAAGGAATTCTTTA ATCTTTATAAATTTGGTATCATTGGAAAGATATTAGTGAGTGGAACAATT TGAAATAAAAAATACTTTAAAAAGATTATAAAAATGAAGATCAAAATGAA GAAGAAAAAAATGACGAACTTGTAGAAAAGTGCTATAACTATATGAGGGG AGGGGTGCGTGCAGCCTACTAATTTAGATATTTTGACGTCATTATTTCCT GTTAAACTCGAACCTAGTCTTCACACGCTTTAAAGGTTGATATGTGTATT CCATAACAATTACTTCTTTCTTCAGTTTGGAATCAGATGTAAAAGATTTT TATTGTGGTGTGGACAATCTGGAAGCAACTATGAGGTTGATTCTTGTTTC ACTCGCCGTAAGTGCTATCTCTTTTATCAGACGCAAATCTGTGCTTTTTC TGGCTTCTGTTTTGTTCATTTCTTGACGGAGACGTTCCTTACAGGAAGTG CAGGTCTGAAAATCGCACTATTTAGGTGTAAAATCTTTGCGAATCAAGAC AACTTTTGTCTTTTGACTTATGCAACCTGCTGAATAATGCAATAAATCTT ACATTTTATCTTGTTTAAGTTATAAATTATGAGTTTTACAGACTTCCTAT TCTGACGAAAATTTTTCGCGAGCTTAAACTTTCCCGAAAAAGGCTGAAAT TCGCGAAAATCGTGAAAAAGCTTGTACGCTTAAAATACTATAGTACTATA GAAAAAACTGAGAAGCTACATTGGTTAAGCCTACGGTCCAGGGGTAGGAT TTTTATAAAATTTCTTAATTCTTTTATCACATTTACTTGTGGTAAAACCG GCACAGTGCACCCTGGTTGCCGAATACCCGTGATTGACCCACTAATAGTG GTGTTTACTAAGAAATTCGACCAAAATCGTATATAGCTGGCTCCGGTCAC GATATGTATATACAATCTAGAGGGCTAAATGACATAAGACACCTCCGGGA ATCGAACCCAGGCTAATCGCCTGGTGACACAGTGGTTCTGCGCCTATCTG ACCAACGTAAAGCCAGCCCTCACGTAAAGAAACCTTATGTTTTCATTTTT TATAGTTGGTGTTATTGATTCTGTTAACGTTAGGTAAATCAAGAAAAAGT TTTAAATTGGGTTGCTGTTTTGGACGACCTGCTCCTGTTGTGTAAGTTAA TGAAGTATCCTTATTTGGTGAAAGAAGTTTAATTTTTGAGATTCTAATAT AGGAGTTGAGTTTTTTTTCCTTAAACCTTACAAGATATACAACATCAACA ATCCTAGTTCGAACTATGAGAAATCTGTTGAACTAAGGAGGTTAGCAAAC AACCCATTTTATTTACTCAACCTTTTTTTCCCAAATTAATTTTCTTTTTC ATTATTCTGGATATCATAATATTAGATTAACTCATTGGCAGATTAAGGAG AAGTTGGGCCGTCAATTTTTGGAGTATCCTCTAATAAAGAATTCATTGTT CCTTCAATAGTCCACTAAACATGCTGGACAACTACGAAAATCGATATGCA TACATGTTTGCTTTTGGTGTTACGGTGAACTCATGCGTAGACGTTCTGTT CGGTGATTACAAGGGCATTGTGGGTGAAAGTAATGCATCAGAATTGAATG CACTACCACCATATTTTTCAAGTAAGAAATCTAATAGCTATCTAAACATA AACTTTCTAAATGTGAACAACAAGCTCTTGTTTCCTCGTCCTAGAGTCGG AGAAAGATAGCAAAACCCATTCTTCAAGTCTTCAACCAAAGAACAGGATT AGATCCCTTAACGTAGTTTTTCCCTTTTGTCATCTTCTTAACAAAAACTA TTTTTCCAGCCCAAGTTCACCTAGCAAAGCTCTTTAGTCTATTTTTTATA TTGACTGACAAGAAGTTCAACGTTATAATAACGCCATAATTGTAAGAAGG GTGGGTTAGAGGGCGGGTTAGAGGGCCGGTGTGTGTCTAACTGTAAAACA TTTATATAACATTTCATACCATCGATATATCTTTCGTTCTTTTCTTAGTC ATCATCAAAGTAGCATTGGCTGCTTTCATCTGCATCATTGCATATCCCTT CTTCATCGCTCATAATTTAAGAAATCGATTGCTCGGATCATTAATTGGGT TCTGTTATACTGCATTTTAGTAAGTATATTAATAATTTAATATTTCTAGT CTCTTATTTATTACACCCTCTTCTCACAGACCCACTGGGACCCCTTCCCA CTGGAAAAATTGTCCAAAATATCGTCCCCAGTGGAAAATTATCCTCCAAT ATTTGTCCCACTGAAAATAATCAACTAAACCAATCCTC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00056912TCONS_00056912Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00056912-proteinTCONS_00056912-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_284supercontigscaffold_284:51847..58634 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.06 0.15 0 0.16 2.11 1.2 2.42 3.37 3.2 4.33 3.91 2.26 4.31 5.5 3.49 4.67 1.28 2.51 4.39 4.22 2.88 3.12 0.52 0.75 1.6 1.93 2.51 2.15 1 0.79