XLOC_035805 (gene) - C. hemisphaerica

Overview
NameXLOC_035805
Unique NameXLOC_035805
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_284:98514..106249+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_035805 ID=XLOC_035805|Name=XLOC_035805|organism=Clytia hemisphaerica|type=gene|length=7736bp|location=Sequence derived from alignment at scaffold_284:98514..106249+ (Clytia hemisphaerica)
CTTCTGATTTTGTACATCAGAATAGAATGTAGTTCCAAATTATGGTAAAT TTGGTAGAGAATTAAGAATAGTGGACAAATAAATTTTCTCCAAGctttaa ataattttcgaatGTATTCATTTCTAGTGTACAAGGTCATGTTGTACTGA ATTATAAATTGTTAAAACCTACGGATCGCAATAAAAAAAGATGATGGAAT ATCAGCATGTATACCATGAGGAAGGTAAGATGGCGTCTCAAATTAATTCT TTTCAGATTTATCTTTTCGTGTAGATAGAATTGTGAAGACTTCCTTTGTT GGGGGGGAGGTGGGATAATTTAATAaacattgttattttttttgtagttt tttgaaattattctcCTATGGCTTGCGTATGATATGCATATCGAGAGGCA GTACTAGGTTTGTGAaacttagagagactgaatttcgaaatttttttgcc aCCGTTAGAGAAACTATTTCCcgaaaattccagccaaaattttcaaactt tattccaaattttaagaatttatgaccctttgagggagtcaatttttgat tttggtaattttggaaCTTTTACGACTTTTACAGAGACCCCATcgctttt taattgtttttgtacCCCATTGAGGGACTTTCAAGgatgtgaaaaaggga ccctaaTGGCTCtgacatacccggcacccattttgtctaagtaccccccc ccccccggatgcATAATCACCCTTTAAAAAAACACTCATTTCagttaatt ttgataaaaaataagcagatttttttattggaaagatCCTTGACTATTAG CTCTCAGCTtccataaaaataaatttcattattAAAATCACATTGAAAGA AAGAGACTTTGATTTATTGTTtagaactttaagtttcatggACGACAATC ATCAGCTAAATAAAAAACGTTTTCCACAAttataaaacaattttgaagac aatttttgaaataaatttgaagacttgtcaaaattttaattatcatttat TTCAGCTGAGATGCAATCAGTTGAAGATTTGGCGTTTGGTCTTGATCGAA CCAAAGATATGAACATTGTCTTGATCGGACGAAGCGGCGTTGGCAAATCA ACCTGGATCAACTCTTTTTTCAATTATCTTCTACACCCATCGTTTGATTC AGCAGTGAGAGAGGGTCCAGTCTATGCACCAGTTTATTCTAGGTTTGTTA ATACTCTTTTCACAACAATTTAATAAGAGCAAGGGGGAGGTCAAAATATT CCTGAAATAAGAATAGTTTAAGAATATCCCTGAGGCTGAAATGATTGGAA TTATAATAAAGTGAAGTGTCGAATAGTGAAAATAAGCACTAAAAGGCTAA AAGGTAGACAAAATACTTCAACATTATTGAAACAAATTAATAGTCCATTT TCAACTACAATCCATAGATTCTTTTCTCAAGTACATTTGAGAACTTCATA GGATTGTCATATGATCTTCAATTTCACATTAAGAAATCTTCAatcttact cttgtctcccgaatagacgtcccccccccactaattgttaagagacaaaa aaaatccatccccccNNNNNNNNNNNNNcccttaagggccgaacgtctgg taggccatttaccttgagtgcccccccccccgggtactCTTTTCacaaca attttataagaacaaggggACAAAAATATCCCTGAGGCTGAAATGATTGA ATTATAATAAAGTGAAGTGTCGAACAGTGAAAATAAGTGTGAAAATAAGT ACGAAAAGGCTAAAAGGTAGAGAAAGTACTTCAACATTATTAAAACAAAT TAATAGTCCATTTTCAATTACAATCCATAGATTCTTTTCTCAAGTATATT TGAGAACTTCTTAGGATTGTCATATGATCTTTAATTTCATATTAAGAAAC CTTCAGAGagttatcactgtgaaaaatgttcaaaagatATTTATTCAATC CAAAAATATAACATAACCCTTAGGAGGCGAaacacgtatatatacgtttt gaaaaggtcattttaccgatacacagtcttttggtcataactcctgacca cttgagattcagagaaaaaaaatgtgcTATTTTTTgcagctgagagaaag agctttccaacgataccaaagttgatacctgaatcgtttgtcctgggcga gaaattgcctttgaaagaataaatttccagaaaaaaatgatgaactattt tgcctttttcaaaaaagtatgcggctttgaaaggttaaaactACTGCCTG GTGGACTAAAAATTGGGCtcctttttgttgtttttaaagcCAATCAGTGA TATACTTGCgctatatcttttgattgagttaatttttgaacaatttcttC AGCAGAGATGAtattctaagatcaaagaatcactgTTGTGAAAATGGgaa ttcccggggggggggggNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNcctgaaaaggtaccctttcagtgcatttt ctcttgatttacccaacccttatagtgcactatatttctcagctgtaaat ctgcgtgaaagaaaaagcttgggaaattatctgtttcaaagaaaaactgg gaaaattattcttgtcagctgtaattatcagacaatagaagctttttcaa acaaacgataaagtataaacctttctttttaacaattattttgaattttt tttttAATTCGACCCTTGCAGTGCAATCTCACAGaaacacacccttacag tgcattttgggatgctgaaaaaccccacccttaagcgcggcacatgacgt aggccagatcatatgagtgccccccccccttcatttttcatcttcattta acaaacttttaaagttttttctatttggtAATATTCTActcttgaatatc ttttcaacaagcacaaaacaaCTATCCATTTCCAATTCTATAAAAAAATC ACAGCTTTTTTGTCTTCGCTgtagattatattgagacagattTTACAGCG TCAGGCACGTTAAGGTTTCGATGACCAAACTACCAAaaaaacgttaagaa cattttaagacttggCAGACtcttaaaacaacaaatttcgtaggaaatcg cacaaaaatacttaaaacaaGTGAACATAAGAACatgttcagaacatttt aaggcttaaaactgaaaaagttaagagcatccgaaggttaggacgttctt ataaaaaaatgtgtatggtAATAAAGAACCTAATGTGGCTGTTTTATAGA AATGCTTGTGTGAGCCATAATGGTCCCTTTTTCAAACCtttgaaagtctc tcaaaggggtacaataacaaaaagaaaattgagtctctgtaagggtccaa aaatcgcgaaaatcaaaatttcctctctcaaagggtcgtgattttccaaa atttggacaaaaatcgagtgaaaatcgaCAAACATTgtgagaaaagtctc tctaagggtcccaaaacgtcaatttttcctctctctaagggtcgattttc gattgttggctcggacatacccgtcacctcgcaaacctagtactccCGGA CTAGAGCTTGATTAATAGTGGCAGGAACCTAATGTGGCCGTTTTAAATTT TGTTCTAGATTTAAACATTATCACGCAGAGGCTGATGACGTGGTCAATAA AGAGGacgatgatgacgatgatgacgATGGTTTCGGTTGTTTGGTCGATA TCGAAATCGGTGACAAACATCAAGAGAATATTAACCAAGAATATCGAGAA GGAAACACTGGTGTATCAGCAACAATGTTTCCAATGGCTCATCGATTAGA GCCTAAGGATGAAAAGTACAGTATCACTTTGATTGATACGCCTGGCTTCT GTTCTACCGCCCCTGGTGGCGACACCACCCTCTCAGAAGCTCAAGATAAA CAGAATATCAATCTTATTCTAAATCAACTTGGTCAATACCCTCACATTAA TGCATTTGTCATCCTATTGAAACCAGGACAAGAGAAGCTTGATCCAGGAT TTGCTACATCTCTTAAGACTCTATTCAGCCAACTTGACGAATCAGCAAAA AGCAATGTCATCTTTTCATTTACTCACTCGAAAAATTGCGACTTCAATGA CATCCAACACCTTCCAGCACTGAAAAACTTATTAAAGAGCAAGGCGAATC TTCGAATTAAACGTAGTAATGTGTTCTATTTCGATAACTCACCCTTCTGC TATCTTGCAACTGCCGCCAATAACTACCAACCAACCGACAGCCGAAGCAA AATGCAAGACTGCTGGGACAAATCCGTTAAAAACTGTCTTAATATGCTTG GCCATATCAACCAATTACCAGCTCACAAAACCGACACTATAATAGCCATT AACGACAGTAAATCCATCATCAAAATGATGATTGCACCTCTCGTTTACGT CTGCAAAATCAATGAAGAAAATTACGCCCTCGTCAACCAAACCTATGATA ATCTGGCTAAGCAGACAGGAAGGAGTGTCATCAAAGTCAAAGACGATCCT AAAAAGAACCAAGGAGGAGCTGATGAAGAAATAAAAGATGAAAATGCTCA TTTGAATCTTGAAGGAGCAAAAGCTATAGAGGAGGAAGAGAAGCCTCTTA TTCAAGAAACAAATATAGATGAAGAAGACAGAGAAGAGAAGGGTGAAGGA GCGGAGGACCAAGAAGCAGAGACCCGAAAAGGAGGGGACCGGGAACCAGA GGACCGAGAAGGCGGAGGCAAAGAGGATGGGGGTCGAAAAGAAGGTTGTG GAGGAGCACTTGATGGTATGGATCTTATTGAAATCAACGAAAAGATTCTA ATCTACAAGAAGCTAAGAAAGCCGATCACAGTGTGCAACAATCCAGCTTG CTTTAAGAAGCAAAGTATCCTCGAGGTAATATTCTCTCTCAGCCTTTCAC TCATAATTCTCTAAAATATGTCCATTGAGTGTCTTCAAATGAATCCACAA TAACCAATTTGTCTACTCAACAAAAAGTGAACGATAGTTTttaaatcata tttatcaattAGTTGCTTTAAATCTAAAGTAAAGTCTTTCTGACTTATCT TTCTTATCTGACCgaagtcggaggcgacccgaaggctactctttcgatag ctatctacccgaagataggggagggcgccactctttctccttgAATTTCt ctacttacccttgatccttccctTATTTGGTGAGCATCAAgaagagaggc atcaagtactattttgagaatctttggtatgacccagctgggagttgaac ccataaccttgcgaaccgtagccggatgctctaccactgcactaagGTCA CTCTAAGAACGTGGTTTCTCTTTAACTTTTAATCTAAACTTATTGTTCAC ACCAAGTTCACGTCTGCTATGCACTGTTTCAAAAAAGGTGCACCCCCTTG AGTTTAAAGCGCAAAAGGCTAAAGAGGGATCTTCAACCTTTCCCAAGCAA GAAAAAACGAAGTCTTACTTACTGCAAGGTTTTTTGTTCATTGGTCTAAG TAGTTGGGATTggacaattttttcgaaatctagcgATGGATTTTACTTTC GATCTAGCGTATGTAAGAAAACAACGCGGGTCACGCGATTCAAATGGCTT CATTTCCAATCCAAGATACTCAATTCTAATCTTTCGGCGATTTAAACTCG ATGGTTTGGGCCTATTCCACCTGATTGACACGTCACTGGTTGACGCATTG CTTTCGCTGATTATTATAACTTGTTTATCTCTTTTAGGAGGGGAAAGACA TTGTCAAGAAGATGTACCATAACGTGTGCTGCCATAATTGTCTGGTCCCC TTCGTTTCACACGATAAGCCGGGTTCGTTGATGTTGCTTCTTTGCAAGGC TTTTGACTGGTCACTGAAATGTCGAAAGTGTGATCATTCTAAGGATGAAC ATATACACATTGCTTACGAGTTGAACGAAGCTCATAAAGTCTTTGAATTG GAGATCAAGGATATCAATCAACGAAAGAAAGATCTAGAGCTTGAATTTGA AGTCATTATCGATATTCTTGTCTTCTTTGCACAGTTCTTGAACCATCATT GTCTGTTGAAAGAGGAAATGCTGGTCGAGCAATGCATTGATAGAGAACTG GTGAAAGTCAGTCAAGATCTTGGCGATTTGGTACGCCTTCAAGATGAATG CCAAGAGGAAGTTAAGGAGCTTTCCGAGAATGACCTGGTCAAATTGCAAG CCACCATCAAGCAAAACGAAGACGAACTAAAAGCCATAGACGAAAAGATA TCATTGGTTACGAAGATGGGAAAACTGAAAGTTGAAACGTTGGGGCAGAT TGATGAATTCGAGAAGATTGCCATGGAAATTGAGCTGAATGAGCTGGCAT CTAAACGAAAACGTTTGCTCAGTTCCAGTGAGAAGAGTCTCGATCAGGAG GAGTTTTGTCAGGTTTACGAGAAACGTCGAAGCAAATACGTTAGTCTATT GCAAGCGCTGAGAGAAAATGAAAACCTTCTGTTACAGTTGATCGAATTAA ACGAAAGCTGTGACAAGATGAAAATGTTAGCTAAAGGTTTGAAAAAGATA CAACAAAAATATTCTGATAAAATGCAGAATCAAAAGCACAGTTTGGTACC CGAAAGCGTTAATGCCAAAATAATAATGCTGACAAGGTTACCACACAATG GCCATATCTTTAAGAAAATCCATGAAGAATTGAATAAATCTAAGACCGAA GGACTCATCCAAGATAAAGTTTATAAGATGGAGGAACAGTTGCAAAATTT ACCCCGACGCACATATCAGAAGATCAAAAAAGCTGCAGAAAATGTATACC ATTCATTGCAGTGATAATTGATAACGAAACTGTGATTTTCAAATAATTGG TGAAACGTAAAAATCACAGATTTTTTTCCGCGAACTTTTTATTCTTGTAT TTTACAAAGATTACCCAGTTTATGATTTAAAAACATTCTTGAATTTAGAA CCTTTTTGGCGAAAAGGATAACGAGAGAGATAAAGCTATATTTTTTTCCG AAGTTAATTCTTGTAATTTAAAAAGATTACCtagtttttcattttaaaac tttcttgaatTTAGAACCTTTTTGGCGAAAAGGATAACGAGAGAAATAAG GCTATATTTTTTTCCGAACTTTTTATTCTTGTATTTCACAAAGATTACCt agtttttgattttaaaactgTCTTGAATTTAGAACTTTTTTGGCGAAAAT GATAACGAAAGAGATAAGGCTATATTTTTGTCCGaactttttatttaatt gtATTTTATAAAGAACACCTATACtagtttttgattttaaaactaTCTTG AATTTGGAaccttttttgattgaaaatgaaaacgaaagAGATAAGGCTAA ATTTTTTTCCGAACTTTTTATTCTTGTGTTTTACAAATATTAACtagttt ttgattttaaaacttttttgaatttagaacCTTTTTGGCGAAAAGGATAA CGAAAGAGATAAGGCTATATTTTTGTCCAAACTTTTTATTCTtgtattct caacttcagttgagctacaatctgacaatgtctgtgtgtctgtgtgtctg tgtgtgtgtctgtctgtcacaaaaactttagggcag
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00056840TCONS_00056840Clytia hemisphaericatranscript
TCONS_00056841TCONS_00056841Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00056841-proteinTCONS_00056841-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_284supercontigscaffold_284:98514..106249 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.25 0.25 0.17 0.17 0.68 0.63 0.48 0.58 1.51 3.28 4.75 2.1 7.53 7.38 11.4 13.26 3.65 6.9 9.33 16.92 0.28 0.34 0.47 0.43 0.22 0.33 11.17 13.06 0.35 0.26