XLOC_035840 (gene) - C. hemisphaerica

Overview
NameXLOC_035840
Unique NameXLOC_035840
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_284:1158848..1162679+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_035840 ID=XLOC_035840|Name=XLOC_035840|organism=Clytia hemisphaerica|type=gene|length=3832bp|location=Sequence derived from alignment at scaffold_284:1158848..1162679+ (Clytia hemisphaerica)
tTTAACAGAGAAGTTGGTAGAAGAATCCCTTGAAACGTAGCCAATgctcc
aagccacgataaacttccaatatggtCACAAGACAAACAGATTGTTCTCA
CTTTAAGAATGAGAAAGAGTAGATCAGATTGGTATGATATAGAATTAAAT
GTTTGGAAGACTCGTTACAGGACAATTGACAGGTAAGCATTTAGTTAATG
CAGTCAAATTGAAAATGTCTGGCTAttgattttcagttttaaggTTACTT
TCCTACTATCAAAACTCTAAGCATTTCGTTGCGAAATTTTTTCGACttca
aaatatagaaaatatcttataatattttcaaattataactgtttcaaatt
tctcagttaGCATGTATAATACACATGATATTCTACCGTTCTTACAAGCC
TTGAAAAATGACTCTGTTACAATCATCTTTACCAGTACTGATATAGCGAG
ATGATTGACACTCCCGACAAGAGACAACACGTCTTTTAAACTCGATCAGA
ATCTGATTACTATTATTCACGACATTGAATTTTCAAACTACGATCCAAAC
ACACAATACACTGGTGATTTCTTAATAGACACAGAATAAGCATTAGACAG
CCTGGtctaaaaagaaatattttctaatGATTTTGTAACTAATAGCGAAG
ACGAACAGTACCTGAAAGAGATGCTATacgtactagtaataacatggttt
gaAGGGTGATTTGGGAGAATAAAGTCCCGTGGTtcattaaaaacatttca
aaatatttggggATATACAGGTGGATGTTTAAACCTTAGAGTTTCCCTTt
gagcatcttcctattttttcaTTGACGTATcttgtagggggggggggggg
ggttatttAACCCACTGATTAGAACCCACTATATTTGCCTCGTTGAGGAC
AATAAAATACAATACcgggtgtgtcaaaaaaaaaacgcgcctatttttcg
atttttgacgtaCACATTTCTATCAAAcaaagacaaatgaaatttttagg
gaagatttgaaatttaattttttacctttgttgaaaattatacatttcta
tgttcatttaaaatgactttaTGATAATTCCGCTGACTTATGTCCCGGTA
CAGTACCCTTATGTCCCGGTACAATACAAAACATACACTTTCTCAAATGG
GAATAGGCTCTAGCTTATCTCAAAGATTACTGCATTCATCTAGAATCATA
TAATTATATTGACATTGtagaataaaataaacaaagttaAAGTTAAATAA
CAACATTGTAAGAATGGAAAACACAGGACAAGCATCAAAGCGAAGAGCAC
AACCATCAGAATCAGATGTCGAAAATGAACCACAAGCTAAAATTTCCAAC
AACTTTGACCCTGATGCACCCTTCTCGAAACCCTGGCAAAACAGCGACGC
GGTTTTAATTGTAGAAGAGAAAGAGCTTCACGTACACACCAATATCTTGT
CTATGGCTTCAGCTGTCTTTGATAAAATGTTTAATGGAGACTTTGTTGAA
TCTCAAACTAAGAGAGTAAATCTTGAGGGAAAATCATACGAAGTGATTGA
ATCACTGTTGAGCTCTATATATCCTATGGAAAATAGTTTAGGTGAGTACC
AATACGAGATATTTCAATGGAAGCAAATTGGGCTACATACAGCTACTCAT
TCAATCTGGGTTTAGGTCTGATGCGGATGTCTCCTTAAATTGAGCAAAAA
CATTAGTATTTTACGGTGGAGATTTTCTGATAAACATGATCATATGATCA
TCCATACAATTCCAACTCCCATAGCCTTTTTTACAAACAAGAGTGTACAT
TGAATGTATCGTTTTTATTTCGCCTTGTCTTAAGGGGTTAAAGGGAAACA
TCTACAACCTCTACAAATGCTTCCCTAACTCAGACGATTTCATTTTCCTT
GCCGTATAAGTTTTAGAGgctaatgttttgatttctttcgaCTTTTAGAA
GCAAAAACTGCTCAAATTTGTTGCGAATGTTCATCGATTGACAGATCAGT
CACTGCTTTTAAACCATTTCCATCGCGAAGATGTGTGAAATGTAACGAGT
TCTTCGATCAAGATGGTAAATACCCACTGACTTTTACAGACCCTGGAGAA
AGTTACATCCGCCATATTTGATCGGAGTTCTTttccgcaaagaagccatt
gcagtgttaaagaTGTAACGTCAAACCCAAACAGTGCTacattttcaaaa
gtatttaaGGCAAAgcagatctagcgctctcgatgcattcaCAACTCTAT
TTAGTAGTGCTACCAttttagggtaccacttttataaaaaaaactctgAA
CAAATATTTCGCTTTGCTGGGATTAACAAACTTCCTCCAGGGCGTCTATA
AAGCTCAGTGTGAATACTTGATTGTACttttattgtgttttttttttgtt
caaagcAAATTTCCCTCGGAAAGATGTTTTTCTTACCCCTCTATATTAGT
AATTTGATTTGTCTTTGACAGAACATAATAGGAAGAAGATGCATTTCACT
CTCTAGTTCAGTCCAGCGGTGAACTTTGAGTTCGTACAGTCGAGCTTTTC
TAATTCTAATCTTTCTCGGAATTCGGACTTAAACGTCGGTCCGTACAGGT
GTTAACTGGTATgaaatactctctgtaattcgaatcgtCATCTAATGCAT
GAAGATTCTGTCCCTTGACAATTGAATTAACGAGAGTAAATCGTACCGTA
CTTTTTTGTAGATGTACAAAGGCAGCAAAATCTGAAACATTTACAGAAGA
TATATCCATTGGCAAAAGAGTACATGATGGATGCcttaaaagaaagaatt
ttatcTCAATACTCACAACAATGTTATTTTATCATGAGCGTTTCCCATGC
ACTTGACCTGCTTGAAACCTTTGAAGTATTGAACCTGGATGATGAAAAAC
ATACCGAAGAAACTGAAGTAAAAGATCGAGTTATAGAATTTCTTTCAGGT
CATTTACCAAACGACCTCAAAGAAATCAAATCATTATTGAATGGAAGGAA
TATCTCTTTAAGATATCAATTGCATTTGAAAGCATTAGCTTTGGACGAAG
CTCTCAGAAATTTGTATGATAAAACAGCTGATCAAAAATATAAGACCGAA
GCTCAATTATTCGTGCAAGATCTACTGTATATGCACTCATTTAAGTACTG
ATGGAAAATTTGTTTCAAGGACACCGAAGAGTTGATAAGTAACCATTGGA
TGCTGAAAGACtgaagctttttaaaaaaagatatagGTCATCTTATGTTT
CTTTATCCAAAGATTGTcttcatgatttttttgataggctctttctagat
tttttttttaagatataatgtgaagaaataagaatccaactatattcact
caggaaATATGGGTGGCAGAATATGTGacccccaagcgatttggagtaca
ttaaaaatgagaccggtcttggtgcggaCAGATCGATAAAATGTGCGGCA
AAAAAGCGGCGAAACGATTTACCGTGCGGTAAAATGATACCTTTGTATCG
GCcagaaatcatccaaaaatcttttctaaaaaTCCATTCAAACGCACTCT
ATCGGTCACTAAAGAGCACCATTTGAATAAGTGCGGTCATGGTGCGGACA
TTTTGCCGTTCGAAACGTTTGCCGGCAAACGAGAAATCATAACAAACAGC
ATACATTTTACGGAAGGGTTTTTTACATGACTGTTCGCCGATTTTATAAC
GTtcagcaaaataaacaaagttgAACTCAAGAATTCACATGTGAGCATCG
AACATCGAACATCGCAAGTTCTTTTTGTGTGTCTAGAAACAAGTTGTTGT
TTTGCTTGcttgaactcgaggctgaaattctt
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00056894TCONS_00056894Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00056894-proteinTCONS_00056894-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_284supercontigscaffold_284:1158848..1162679 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
19.93	19.52	12.32	11.69	24.45	19.13	7.34	8.58	4.33	3.99	4.13	4.02	4.48	3.78	6.09	6.73	4.24	6.32	1.1	1.62	4.86	3.47	13.98	12.07	4.58	6.52	2.77	2.22	6.82	7.43