XLOC_035878 (gene) - C. hemisphaerica

Overview
NameXLOC_035878
Unique NameXLOC_035878
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_284:1315323..1320812-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_035878 ID=XLOC_035878|Name=XLOC_035878|organism=Clytia hemisphaerica|type=gene|length=5490bp|location=Sequence derived from alignment at scaffold_284:1315323..1320812- (Clytia hemisphaerica)
TGTTTTTTGTGGAGCTAGCTTTTGGGGTTGGCAAAAGAATTCTTTTAATT TCAATTTTTTGTAAAAAATGCATTTTAGAAAATTGATTTCCCTAATTGTT TATGCTATCAATGTACAATTCTATAGTAATCTTTTATCTAATACTTTTAC CTTGCAATCTTTTACTTCTACAAGCAGAGTAACAAGAACCTATTTTTTCA TTTGTGTTAGTTTAGCTCAAATGAAAGAAGATGAAGATAGATAAACATGT GAAATATTTCATAAGATGCTTGAATGCACTTCCTGGAGCTTATACATCAA TAGACACTAGCAGGTAAACGATTTACACTTGTAAAAGCTTTACATTTTTA CAGTTTCCTTATTCTAGTCCAGCCTACAGCAAATCACTATAAAAGATGAG AGAGGGAAATGAAATATAGATTTTTTCATATGGCATGTGGTCTTTATTTT AACTTTGATTAATATTTTTATTGTTTTTTGGTATCTATCTATTTATTAAG TGGCATAAGGCGTGAGCCCATAATCGCGACATATAAAATAAATATTATTG TCATTATCTACAAGTTTAATTAAAATTAGGTAGTTTCTGGAAAATTACTT TAGAATAAAAAAAATATTTTTATCATTTAGGATGACAATCTTGTTTTTTG CATTGTCTGGTTTGGATCTCTTGAATGCCTTGGATAAAATTGAAAATGAT AAGAATAAGATTATTGATTGGATTTACTCACTGCAAATACTCCCTGGTGA AAATACAGGTAACTTTTGAAGTATATTTTTAATAATACTAATCAACCCTG ATGATGGAGTAACATGCAACTAAATTCAAAGCGTACCCCAATTTGGTTTG TGTATGAATTGTGTTTTTTAGGAGAAATGCTTCTTATTTTTTGTTCAAAG TTTGAAGGTTTTTGTTTCCAGCTTTCATAAGGATGGGAACCCCTTTCTAG TACTTTATAGAAATGTTAACTATTTGAAATGCGATAAAGCATGGAGTTTG TTTTTCTTTTATATTTAGCTGATAAAGATACAAAGAAGTGTGGTTTTCGG GGGTCATCATTCCTTGGTGGTGAATTCAATCCAGATGTAATTCTTCTTTG ATTATTTTTAATTTTCTTATTCTCAGAAATGTCTATTATTGTCAATTTGA AGCCACTGTATGTGAGGGCAAAAATTGATCTATAAAGTGAACCCTGCAAA TGTGCAGGGAAAATTTGGCAATATTTGTCCATTCTTTTTCCATTTTGAAG CTACATATTTGTACCTTAGCAAAATTCTTTGATAAAAAGTTCGTTTCGGA AACCTGAAATGGCTAGACTTACAACAGATCACCTTGAATTACCCTATTTT TTGCTTGTATATGAAATCACAGAGTCTCAAAGTCTATACACTATAATTTT TCTTAAATTTGAAACTAGATTTTACTTTTAGGGTTGTTTTACAACATCAG AAATTTATGAAGGCTCCCATATAGCGATGACTTACACAGCACTTTTATCA CTGCTTATATTGGGCGATGATTTATCTCGTGTCAACAAGAAAGCTATCAC TGAAAACCTAAAGTCACTACAACTCAAGAATGGGAGGTTTGCTTTACTAT TATCTTTAGTGAGCCAGGTCTTGAGGGTTAAATAAAATTGTATCTAAAGA TAATTTGAATGATTTAAATAATTTTAATTCACAATTTCGAAGTTTAAAAA AATACATTACTTCAAGTTGCATGCTTTGGATATGGATATATGGATACAGA TTGCCGTAAGGCATGAAACTTGAAGTACTTTTTTTAACTTCAAAATTTTG AAGTAAATTTGTTGGTTTGCTTTACACAGTTTATCACGAGCACTCTTTTA AATGATGTTTAACAATATATATCAATAATGATATAGAGCGAGCTATACCA ATTGGCATTTTCCCTCCTACCTGGGTAATGACTATGCAGAACATCCAGCA ACCCTCTAATATAGTGGTATATCTTGGTTTCATATTCATACTTATCCCAG GCAATTTTTCTGTGTTTAAACAAGGACTTTAGGGTGCACGACAATACAAT GATTGGTATAAAATCGAACATGCTCCTGCTTGATGGTATTTTTGAGGCCA TTGTTACTTTTTTTTTTCAATTCATTTTTCAGTTTCTACTCAACACCTGA AGGAAGTGAGAACGACATGAGATTTTTATATTGCGCTTGCTGTATATCCT ACATCATTGATAACTGGAGTGGTGTAAACAAGAAATTAGCTGTGAAATAT GTTCAAAAAAGCATGGTATATAAAGTCTGTTCCAAAGAAATTGACAGTTT GTTCTTTTTCAAACATTCCTCTTGAGGGGGGGTCTAGCTGAAAGTAATAC TTCGTTGGAAAGATAATTTTGACCGGCTTGGAAGCAATTTGAAGATGAAA TTGAAAAATTAAGAAGAAGAAAATGAAGACTTTCGCTACAGGACTAAAAA CTTTTTTTTATATTTTTCTGAAGTTTTGAAATTTTAGAAGGTTCAAGTGG GCGATAAATTGCTTAAGAATGCTCAAAATGAGCTTATCACAAAGGGCTAT AAACTCTTAACACAAAATACATTTTAGAAATCTGAATACATTTTAGAAAT CAGCGTGCTTCCAACGGTATTACTTTTAATTATAACATTTTTTCCTAAAG TGCAATGTTTAAAAAAGGACAGTCTGCCAATTCTTCTGGAGTAGACTTTA GTTTGAAAATAATCTATTGCAATAGTCTTTAGTATGTTTTGATTCTTTTT TGAACAGCCAACCTCCAACTCCAGTCTTTGTAAATATTCTATTAGCTCCT TATTCATAACTATTTCACGGTTGGGTACATAACCATGACATAACAAACAT TAAACACTATACATTTTTAAGGCTACTATGTTATAAATTTGTTCAATCTT AGGGTTATGATCATGGCATTTCTCAAGGACCACAGCTAGAATCTCATGGT AGGTGAATCTCTTGTATAACTAATAAAGTTAAGTGCAAAAACTTTTCTAA CCAAAACCTGCCACTCAAACCAAAGAAAATAGCCATGAAATTTATGAGAC TCAACACAAAATATTAAAAAAAAATCTCAAATGAAGAAGTAACAGAAAGT TACTCATTAAAAAGCAAAGCAAGCAGAAAGTAGAATATGAATTTTCGCTT GGATGATAAGAACCAAATCTAGTATCAGGTGTGGTTTAGAGTAATCCTAA GCATAACGATTGGTTTAATAAGATCAGTAGTCTTATTCCTGTAATTCCCC TACCCATTTTCATATACTCTCAATATTATGTTGTCTGTAAAAAAAGTCAA ATTGGAAGAGTTTCTCTTCTAAAATATGAATATCCTTTTATCAGACATGT AGGTTTCTGTCTCATCTATATCAGGAATATCAAAATTTTGCATTTTTTTA TATTTCAACATTTCCAGGTGGCTCTACCTTTTGTGCTGTAGCATCATTAC ATCTCATGGGAGAATTAGAAAATTGCTTTGACTGTAAGAAATTGGAGAAA CTGAAGAGGTGGTGCTTAGTACGACAGAAAAGTGGATTTCAAGGCCGCCC TAATAAACCTGTTGATACTTGTTATTCATTCTGGGTTGGAGCATCTCTAA AGGTGACGTTTCTTAAATTTGAGATTCTCAAGCGACCGAAGTGCAAAGGT ACAGGGTGCGGCAAAAAAATATATAGTTTTGTCAAGATATTATTAGCTGA CGGTTTAAAGATTTTTCGTTGATTCTTTTTATTTATGCTATAGAGAACTT TAAGATCGGTTCAGTCAATCAAAAGTAATGTTGAAAAAACATTGATTGAC TAAACTGATTTTAAAGCTTCAATTCACCAAAGTTTAAGTAAAGCTACCCT CTAAGCTTTTTTCACATACACATAAAATCTAACATAAGACCTTTTGGAAA ATCATTCGTAAGGCTGTCTTTTGGGAATTTCCCTGACATTATGTAGAGTT TTTGTTGATTAAGAAACTTTTTGAACGTAAGCAAACTCTACATGAGGCCT TAAAACACTACGTAAGCTTAGGGAAATTCCCCACCCTTCAAGGTCTTAAG TAAAATTTTACGTACATGTGAAAAAAGCTCTATAGAATAAAAAAAGAATC AACAAAAACTCTTTTACCGTAAGCTCACAATATCTTGACAAACCTGTATA CTTTTTTGGTGCACTGGTAGAGCATTTTTTGTGCGCAAGGTTGTAGGCTT AGTCCGCGGACCGGGTTATACTAAAAGGGAAAAGAGTGGCCCCTCCCTTA ACCTACGGGTAGATGGCTATCGAAAAAGGAGCCCTTTGGGTTGCCTCCGA CCGCAGTCGCAGACTTCTTTCTTAAGATTCTCAGATACCTTATTATTATG TTTGGTCATTAAAGTGGAATCTAGTCTCAAGTTTTCAAAGAAATGGAGCT AAAACTCTGACTCTCAGTTCGTTTGAAAAAGTTAAACTTTTGTAACTGAA GATAACGAGTATCATTCAATTTCGATAACCTCTTTCCATTTTAGCTTTTG GATTGCTTTCAATTTGTAGATATAGAAAAGAATCGAGAGTTTTTGTTAAC AACGCAACACAATATTACTGGCGGTTTCAGTAAATGGCCAAATTATCACT CTGGTAAGAATGTTTACAACAACTTTCTCCTTCTTCCGCGCTGATTGAGC ATACAAATGTTGAGAAAGTGTTTTGTCTATACTCTACTTTGTCAGCAGAA AGGCGCGCCATCTTTCTATATCATAACGAAGAATATCCTTAAATAGCCTG CTCTCCTTGTTTCAATAGATGCACTGCATACCTATTTTGGAATTTGTGGC ATGTCGCTTATGAATTTGTACAACCTCCAGCCATTATCTCCTGCATTGAA CATCAGCGAACGAGCACACCAACATCTCAAGACTCTTCATAATACAAACA CAATGGATATTTCTTGAAATACCCATTCTTCACTAGCTTTTATCAAAATT TTGTAAAATTATTTCTAGCATACTATGTAGCTTCTTTATTAGCTTATTAT TATGTATTTTCAGTTAAGTCGACTGCTTTTAACCCTTCTGTGCCTTATTA ATGAGCACTTTCTGCTTATTAGCCAATTTCAGCATATGCTAATATGAGAG ATTTGAAATTTCGATCTTGAACTAAGTTTTTTATGATGGAAAAACCTGAA GAGTGGAAAATGGGAAATACATTTCCAAACTCAAGGGGACACATATCACT TACATTTCTGATAATTTTCAGAACATTTTAAACTTAAAGGATGGTATGCA CCGCAGTCGCTAATGTCGGCATAATATGCTCATATCTGGTAAATGGGGTT CAACTTAATTTCTCCCTTCGGGAAATGGGCAAAACCTTAAAAAAACGCAG ACAGTTAAAAAGTCAATTGAAATTTGGGAATCTATCACAAAACATTTTAA TTTAATCCTTTTATTACGAAAATGATAGATTAGGTACCAAACCCCCTATA TTGTAATTACCCCGTTAATCAAACAATCTCTTAAAATATG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00056973TCONS_00056973Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00056973-proteinTCONS_00056973-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_284supercontigscaffold_284:1315323..1320812 -
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
PGGT1BPREDICTED: geranylgeranyl transferase type-1 subunit beta isoform X1 Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
46.2 49.23 18.44 12.81 23.3 17.25 16.4 16.57 19.25 18.57 17.92 14.38 12.62 10.7 13.43 14.44 17.66 19.2 7.43 10.58 14.27 14.79 35.88 34.36 13.67 14.75 19.94 15.51 34.92 40.56