XLOC_035847 (gene) - C. hemisphaerica

Overview
NameXLOC_035847
Unique NameXLOC_035847
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_284:1346972..1354288+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_035847 ID=XLOC_035847|Name=XLOC_035847|organism=Clytia hemisphaerica|type=gene|length=7317bp|location=Sequence derived from alignment at scaffold_284:1346972..1354288+ (Clytia hemisphaerica)
CATTCGGAACTGTGAAGACGGATTCCAAGTACAAGTAAACCGGATTACCA GCAAGACATATAGCACAAACGAAGTGGAGCACCAAAAGAGCTTCGATGAT CTTGGCAAGTACCAACAAAGTAGAAttttctgctcccttcgctatCCTTT GTATCGTATCAACAATCGAAACTTCGATGACGTAATCACTGAATAATAAG TAGGTCACATAGCCTGCTGCACAGTATAATATATAAACACATATAGCTGA TGTTGTGACTGTCCTATTAAGAGATTCAGTATCTGGATCTATAGCTGCCA GGCTCGGTAATACCAACATATATCCAGCAAGTGAGAAAAATATAGTGCCA GAAACTGAGAAAAATGTGTATGGTGGTGTGTAGTCTATCCACGGTAGTGC TTTCTCTAAGACACTCTTTGTTAAAGGGTCTGGCGGCAAGATATTATTTG CTTGCACTATGTATCCTGATACAATAACCAAGAATAATGCAGTCACACTG AAAAAAACAGCTGATGGTCCAACGAAACCCAATTCTTTGAAAGAACCGAT CATTTGGGTTGGTAGCAGTCCCAAAAATGTGATAAGTAGCCAAATGCGAG TTAAGTTTGATGAATTTAAATTCAATGGCAAGATTGGCAATGcagattct aaaatggtagcAACAATCATTGTAGCAGAGACAACCAGGGAAAGGTTGCT GGTGATTNAAAATGTTATAAGTAGCCAAATGCGAGTTAAGTTTGATGAAT TTAAATTCAATGGCAAGATTGGCAATGcagattctaaaatggtagcAGCA AACATGGTACACGAAACGACGAGGGAAAGGTTGCTGGATATTTGAATGCA AGTAAAAAGCATATTGAGCCATGATTTCTTACCAAATGCACGTTCAGTGC AATATTGTAATGGTCTCCGCAACGATTCGTCATTTTCCGGGGTTTTGCTT AACAAATCACCAAATACGTAATTTGCAAGCATTGTACAAGCGTATGACAA TATCAAATAGAAAAATAGCATCAGAAAGAATGAGCCTACCCCGACTTGTG AGACAACCCCAGGGAGTAAAATTGAAGCAGACCCGAAGATGGTGCCAGTC ATCATCATACCGCTGACCACAGGGCTCATTTTTTTTACAGCGGAACTGGC GGTTTGCGGCgctttctttttcatcttttgctctaaaaaaaagaaatgaa aaaagattctCCTTTAAATCAAGTCAACAGATCCCTAACATAAGAGAGTT AAAATTAGTTACAAATTTTTGCTATTCCATAATTCAATTTGATTCATGTT GTCTGGGCAACCGTTAACTTTTGATCCATAGTGTTTGTTGTTAGTGCCTT TCATTTCTCGTTCAAACATCATATCGCAATGTCATCCGTGACCAAAATGA TTCTATCTAAAGTATAGACAACATACAGTAATACAAACTACTTATAAAGT AAAATCAGGAATGTTATTGCATTTATTGTTGAtaagaaagaaattaaatt tgtgGTTAGTTTCATACGACTAGATAttatcatggaggtataaatgTATG TATTCTGCACACAATAAAAAGATTTGAGTCCACCATGATTAAATCTATCA GTAAAGTGTTTCGATAGATAAACGACTGATATAGTAAGAAGGATTTTTGT TACCTTAAAGAAGctaattttagcgggaacttattttcacggtcgaaaga aaaaaatataaaaaatcgtgTTATATCGTATTTTACTGGAattatttttg ggggttttgGCCTATTTTGGGCACATGTCTTTCATTTTCCTACgggtttt tcaaattttttgataaaaaatggcCAAGTGAAATtgttttagaagaaaaa aaattcactggAGATTATTATAATTGGAATGGGAATAAAATGGAATTTCT TTTTCCTATTATCTACATATAAATCCAGGGGAGTAACTTAGGCGAAATAG GTATGTgcaagccataagggtacccTTTTTCATACGtcaaaagtccctca aaggggtacgAGTCGAGAGGTCAATCTTTCAAAAAGTCCCAAACTCACTA AAATCGAGAATTTccctctcaaagggtcacgttttatcgaaaattttgac aaaaatctttcaaacggactcaaaaatgtcaaattctttctctctatata aaaaaaaaatcctaacaATCACGAATATTCTGACCCTTAGGTTGCCTGTA CTAGATGACCATGGCNTTTTCtctatatataaaaaaaatcctaaaaatca cGAATATTCCGACCCTTAGGTTGCCTGTACTAGATGACCATGGCTTTTTA TTCATCGACACCGGTGATAAAAAATCGCATGTTGGGACAGAGATAGACTA AGCCTTAGAGGGACtactttaaaattttctgaTGATTGTAACCCTTAGCA GAGACTTACGAAGATGAAAAACCGATTCTTATcgtctgcacatacccagc acccatttttacCTAAGTACACCTTTCCTCCCTCAAAGTAGGGCTAGAGA CGatcaaaaatcacgaaaaatagCAAAGATGGAAAGTTAAACCAAAGACT TTATCACGATCAAATTCTTGCacaaaactattttcaaaagaaaataactC GACTCTTCTCTATGTTGCTATTGGAAAAGCATGTTAACAACAAGCTTTGA AAAATACTGTCGTTACCCTGAATAAATAGAGATTGGATATCAAATAGAAA CACAAGTTTGATAGAGTGTGTTTACAAAATCTACcctctgaaaataatca gataagcaataTTGtaggggctcccccaggggctggcgtgacacgtgaat gaGCCTTTTTTCTGACGTGAgtacgtgaattggacttttttagcgcgtga atacgtgaattgagatatcagcgtgaacgtgaaaataagatttttccacc gtgaattcgtgaatcgagatttttagcgtgaacgtgaaaagcaaatcatt GTCTAAAATACAAGGAAACTCTAAAAATCTGTAAACCTAAATCTGTAAAA TTTCTTGCTCGCCTCGCTTGCATAGTCTTGGATTAACTTATTGTCATTCG AAATAACCAAAACTTTATAAcattaaaatcatcaaagatatcttaaacaa atattttcattatttttctgagggcgtattttttcatttttaatgtcaat ttttgtgatgcaaatacgagagcgtttttagccaaaacaaaagagtctag agaaaattttctctgtCAGCGTTTAATAATGGTCATCTCTCCGTAGTCAC TTATATTGTTActatacaatacaatacacaaaATGATACTGCGTTAACTT AGAGAGATTTTTGCTCCTTCAATACTTTGcaaaagtaggtagttctaaaa cATCTCGTATGCATGCAGCATCgaagaagtaaaaaataattctcatagat aatgatgcacatgatgccttttcaagcaatctaggcattctaaattttaa aagttttctcttGGGCGAAGCTCTTGGAAtaccgcaccgggtacggcagg gaCGGCGCTNTTAAAAGTTTTCTCTTGGGCGAAGCTCTTGGAAtaccgca ccgggtacggcaggtacgtcgcttgCTGTTTcagatttttgccaacaaat ggtcagtgttgaataaaatcaaagaattgtgtgaccaaacaaggcagaCT TGACTAACACTAGCGTATTAAGGTCGTTTTTTCAGTCATAaaagagcgaa aattgtcgaaagaTTTCGCGCTCGCATTGCTTTTTTACATACATTTTTTT CCCATGAAATAGGCAGGTGTCAAACATTGGAATTTGCGTCCTCTTGTTGT ACACTACCGCTCCACctctttgaagtttttgttgaagtctacggcttctc aaACCATGATTAGCCCAACCtcgatttaaaatcaaaaaagaccttttacg ggtctgcgaggaagaaaATCCCACAACAACAGCCCACCCTACGCCAGAGG GGtagttttttgtaacttttgcgcggcagacctaaaacaTTGCTCTATTA AAGCttaaatagctgtaaaagatgcCTTAAATGATCGACGCTATCGataa taaggtcacaaaactgcaaaaaactttatattggcgaaaatgtttggcaT TAGCATAGGTCAAACCGTCTAAAGAAACCATAGAAAGGTCACAATCGATT Taaccaaaaatataaaagcaaaattggcacgtgaacgtgaaaatggtttt tttcgcgcgtgaatacgtgaattgataaaattttgtgcgtgaatacgtga attgagggtcgactgggggggggggggctatttgtaatttttctcCTGCC GTCACAGATTCCCctcatataaaaaaattaaaaaattttttttttgaaaa ttggaaattgggggggggggggctttttttttttttttgggggggggggg ggctcattgTACTATTTCTCCCATCCTCACTGAATCCCCAGCtataaaaa aatgagaatatattaatccccatcgagttttaggctgttatttttacccc cactggcatAGAAAAAAATGctatcgggtctgtgagaaggggtgtacaAT TAGTTGCAAGTGGATAGTTTTGTCTCGTTTGGCAAAAAATTTCGTATGCA ATCAATCGTTTTCCCTTCATTCCATGTCCGAGATAAAATTCTTTGATTCT TTCAAGTCATTTGAGACAGTAAagacaaaaatgaaattgtattcatatct taaaaatatctcgagaaatcgctaaaatttcaaacctccgttttgggggc cattagaaaaatactagatttgagagaaatttcaaatttaatcgacgttt tgggggccacatactgtagggttcaaagtttctttcaaaaattacgGACT GTCCTTTTTTTTTGGAGCAGACTTGAGAATGCGAATGCGATccacaaaaa ctcaaaataaaaccaagccttttgacaaaaaattgtcTTGCTATTCGagg taaatcactaaaataaaaaatataaaaaataaatcaaaaataaatcataa atcaaaaataattcacaaaTCTCGAACAAAATTTTCGAGAGATTTACCCC TCGTTGCTATTATATTAACTGAGAGGagattttgctaaatttaaaAAGGC ATTTGCTTAAATTTTGTCTTCCAAGTCGACTATTTGCAGATCAATCCAAC AAAGAGACGCACCCAAAAGACTTAGAAATTATTTCAATTGTAAAATTAAC TTCTCGATCTAAAGAAAAACATCTAACTACGACAAAAAAGCATGACAATA GGTAAAGCCTTGGAAttcttgcagagtccggtgcgtcgacCCTTGAAAAT tcgggggacagattgattttcACATCCGTTTgtactcataaccgcagcag gtctccaaggtgagcagcATTTCTGAACAACAATTTTGGATTCTTGGATT CCCTTAAAATTGGATATAGAAACTTGGTGATAGGTTTCACAACACCAAAC TTCGTAAATACAGTGTACATCTaagtttaaaaactttaaaaagacacGCA AGCTTCGAAATAACTTCAATATGTTTGATCTTTTATAAAAGAACATCCAG TCCCACATAATTCACTCCAATTGCAATCACCAGCgataaagtaaataaaa accAACAGAACACTTTGGTCGTTATTGAAGTTTCACATAAACACAAATAC AAAATGATTGGAACGAATGTCGCCAGGTTGAACAAAAATCCTCCACCAAG CCAAGATACGAATTGCGAAAGTTTTGGAAATATGATGACAATCAAAGTGC AAGCACCAAAAATGAGAGTTCGTAGTAAAAACCGCTTCCAACAAAATTCT ATGAGAAAATAAATAGTCTATTTTAACAAATATCGTATTACTTCGAACGC CCCTTAGATTAAACGCACttcctaaaatcttaaaaatttatttaacgccc gggcgtttattcgaagtcaTATGGTAGGGTCAAGAATTTTACAAAGTGTT GAACGAGGCTGAGGAATGAACAATAAATTTACCCTTAACAGAGATTTTCA GATAATCACTCTATCTCACTCAATTGTATGAAGGTCACCTTTcaactttt ctgaaaaatcacccAAGTAGCATTTCATAACTAGCCCCTTCCTATCGTAT CATACTACATATTCCTAAAAAAAGTCAAAGTCTATATTTCCTAGGGTGTT TTGGTAAAAATGACCCCAAAATCAATCAATGATCGACTTTCTACCAACTC CCCACTCCAAAGGAGTAAGTGATTTTTAAGGAGAAATATATAAAGCCTTA CCATTCGGAACTGTGAAGACGGATTCCAAGTACAAGTAAACCGGATTACC AGCAAGACATATAGCACAAACAAAGTGGAGCACCAAAAGAGCTTCAATGA TCTTGGCAAATACCAACAAAGTAGAAttttctgctcccttcgctatCCTT TGTATCGTATCAACAATCGAAACTTCGATGACGTAATCGTTGAATAATAA GTAGGTCACATAGCCTGCTACACAGTACAATATATAAACACATACAGCTG ATGTTGTGACTGTCCTATTAAGAGATCCAGTATCTGGATCTATAGCTGCC AGGCTCGGTAATACCAACATATATCCAGCAAGTGAGAAAAATATAGTGCC AGAAACTGAGAAAAATGTGTATGGTGGTGTGTAGTCTATCCACGGTAGTG CTTTCTCTAAGACACTCTTTGTTAAAGGGTCTGGCGGCAAGATATTATTT GCTTGCACTATGTATCCTGATACAATAACCAAGAATAATGCAGTCACACT GAAAAAAACAGCTGATGGTCCAACGAAACCCAATTCTTTGAAAGAACCGA TCATTTGGGTTGGTAGCAGTCCCAAAAATGTGATAAGTAGCCAAATGCGA GTTAAGTTTGATGAATTTAAATTCAATGGCAAGATTGGCAATGcagattc taaaatggtagcAACAATCATTGTAGCAGAGACAACCAGGGAAAGGTTGC TGGTGATTTGAATGCAAGTAAAAAGTACATTGAGCCATGAATTCTTTCCA AATGCACGTTCAGTACAATATTGTAATGGTCTCCGCAACGATTCGTCATT TTCCAGGGTTTTGCTTAACAAATCACCAAATACATAATTAGCAAACATCG TACATGCATAAGCCAGTGCCACATAGAAGAACAAAATAAAGAAATATGAT GTGGTACTGATTTGGGACACAACCCCAGGGAGTAATATTGTAGCGGAGCC GAAGATGGTGCCAGTCATCATCATACCACTGACCACAGGGTTCATTTTCC TTGTGGTATCGGTTGTTGGCGGCGCTTTCTTtttcatcttatttttttgt ttgaatcactaatctag
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00056904TCONS_00056904Clytia hemisphaericatranscript
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_284supercontigscaffold_284:1346972..1354288 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.4 0.17 0.08 0 1.03 0.31 0.25 0.44 0.24 0.15 0.33 0 0.1 0 0.14 0.26 0.7 0.1 0 0.07 0.32 0.16 1.08 0.84 0 0 0 0 0.38 0.43