XLOC_035950 (gene) - C. hemisphaerica

Overview
NameXLOC_035950
Unique NameXLOC_035950
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_285:283799..289703+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_035950 ID=XLOC_035950|Name=XLOC_035950|organism=Clytia hemisphaerica|type=gene|length=5905bp|location=Sequence derived from alignment at scaffold_285:283799..289703+ (Clytia hemisphaerica)
ATTTGTATTTAGCTTTCGTCAGTTTTAAGTTCAAAATAGATTATATTCTG ACATTTAGATAGTTCAGCTTCACTATGTTTCTTTAAATGTCTTTTCAAAC TGTCCATGCGCGAAAAGTTCTTTTCACAAATACCacattgaaatttcttt tcacCCAAATGTGTTTGTTGGTGAGCGACCATGTTACTCCGTCGATGAAA CGCGCGGCCGCAAACGTCACATAAGAACGAGCGTTCTTCAGTGTGCTTAG ATTTGATGACAAGTACAAAGTTCTTTAAAAGAAGAGTATAAAAACGCTAG CAATGCAATCTTCAAATCAGTCTTGGACTCACTCATCAACTCGTCGCACC TTCGattgaaacttttcaaaacatactGATAGTTTATTTTCATGTCATGA AATAGACATCAGAACACAAAACAATTTTTGCTCAACGGAAGCCGAGCATC GTATGAGTCAAGCAGTCACAGTCAATGATACAGTGCTATTGATgaggccc cccccccagcggacccaaaattcacgccatcacgccaatttcttttcgat ttcacgccatcacgcctgaaaaatttgcttttcacgatcattgagtttca agccgaaggctagaggtcaatctccttggtaggatttgaagccaacaaat cctaccaaagttgcgcggccttgagcgacccgcctggtNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNattca atccgtcatcaaaaatacggcgcatattttaaggcttcaatttttcttgc ctgagaaaggttagagattgacctctagccttcggcttgaaactcaatgt tcacgatcacgccaatttttttcgatttcacgccattacgactagaaaat ttagttttcacgttcatattttgttatataaacatgtgtgtttggtcgtc aatcagtttttcggcattctcatatgcgtaagtcaagattatatcatttt cctatcgaaaacacccgaaaaagttttttgggtgttttcgataggaaaaa tgacgcagtcttgacttatgcatatcaaatattgttggacaactggtcac atcaaagggcaccggtttgaggactgaggtatatttgagtaaattgacaa agCCCACCATGGTTGGgtaacggagaaaatttttgaattttgaagggttc aaagtgctattttaggacccatttcaattcaatttgaaaaataattaatg taaaaataatggaaatcttttaaaagtacaagcaaCATGAGGGGCCATGC CTCCTGGTCCCCCGTTGACGGGGCCCATGGGCGTTAATTGTGAATTAGgg tgaatagttttcaaaaggggaacgaggaggcgcaaccatggtttgcgacg acaggagaaattttcaatttagtattaaaaagaaatcgccctcatttact ctcctttttccaaaatatggtttaaacatcacatgattcctttgatcaat ctgcttaaaatttcacctcataataaacctgttgcttctttctgtttaag gctttgctaaaattgtatgttttcctgaaataaaggacctgatctctttg atgcatctataagaataagcatctaagagaggaaaatgttagttacggag gaagcgcaaccatggtttgcgctgacgggggaaaattttcaattttcgac cctctcatagcattcgactttattattttgaagactagctagcaactgct aaaaacaatcggaagttacaaagataaatggcagatgaataaactgtttg caccgtttcttttatgttttaaaatgagatctataggGGGCCCTATAGGA GGCCTCGCCATAGTTGaggccgaccaagaaaattttgaaatttaaaccct ctatattggctaaaatggacatagaaatacgattaaactaataaatataa ttttcacgatcacgctgaactgcaaatttcacgccatcacgcctaaaaaa actcgatttcacgatcacgccatcacgccgtttttttcaaaatttcacgc catcacgccacgaaaaaccctccatcacgccttcacgccaaccgctgggg ggcctcattgATGATGCATGACCTTACTGAGGGCCCCTTAATGTTGTGCA ATACATTGTTTTAAATCAAAGTGTGTATTTCATATACATGCTCTTGATGT TCACAAGAAGGGGAGCTCAGGATATTAAAGGTCATGTAATTCAAACTACT GTTATTTCATGCAAAGGAAAGGAaaggtatttaatttttcaaattcataa tattttttAGCCACTTGCTTACATCTGCGGTCTTAGatattgttatattt ttgtaaacattcgaaaacctcctttttttctttttttttaaaagaaaaca ttgcagtgtaatttttctttgttttcaattaaaagaagctattgtaacgt aaaatttcttttttcttttttatattgaagaaaaaaaatgtctttgtttt ttattatatagtaaaaaaaagtctctgacacaggacttgggagagaaaag aataaggggacaaagNNNNNNNNNNNNNccgccgaagagtgcaaaaagtg gtaatagtgcaattaacgattaattgcactcctctaaaccaatcagattc gagtaattttgcacggctNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNagtgcaattttcgaattgtacg agttattatgtgattacgagctaatcgcacaatggctttcactacttttt cccagttaggaaagtaaattaaagaaattatgactgagatttttatattt ttctcttctctatgtgtctttcttttattgttgtttattgattttctttc tctcaaaataaaattcgaatgcaattaaaacgttcgatgtaaaaaaatgt aagaaaaaacattaaaatcaattttgtaaacattggcgcggaNctttggt tgagggtgagcattattcttatttttctattgttctaaacaataggccta ttgttttaaactcgaaatctcaccctgatattcttatagaagttattctt ataaaagaaaaagcgtgtactgtTATTTCATGCAAAGGAAAGGAAaggta ttcaatttttcaaattcataatattttttAGCCACTTGCTTACATCTGCG GTCTTAGATATTGATTGATCATAACAATCATTTATTAGtctctgaatcgc agacctctacaaaactgcagttaaagtctgtctcaatatgaTTTGCAGCG GAGGCAAAAAAAGTTGtcacttttgatagaattcgaattagatagcggtt ttgtgctcgtcgaaaagataatccggagtggaatattaccaaaaaattaa aaaaattaaaaaatggaaaaacgaagatgaaaaatgaagaggaagagaat caactttttgtagaataatgctttgattttcatttttgtatcagaaactC TTCGATCTTACAACGTtgtaaatgtgaaaaaaaattcaaaagaatattca ttcagtcaagaaatacagcttaaaactttgCCCTGGTTGACCTAAAAAGG GCTCTTTTTGTTATCTTTTAACGGTTTTTAAGTCAATCAGTAATAACTAT ATCTTTCGATGGAATAaatttcttagaagaatgttttcaCATTAGGCTCT AAGATCAAAGAGtcactcgtgtgaaaatgatagttagcaaaattattgaa aaagttgattttcttcttcttcattttcgatctaaattttccaatctttt ttaaatgttttcattatctaatattccactcctgtttgtcttttcaacaa gcacaaaaccgctatctaattcgaattttatcaaaaaagttacgTAAGTT ATAGCTTTTATTGTCTccactgcaaattatattgtGACAGACTTCAGTAT ATAAAAATTACGAATCCGTTAGCGGATGCCAAGAACCTAGATCATACACA GGCCTACTGAAAGAAGGATTTGTTTTCAATAATTCGTTTTAAGTTTAAAG CACCTTCTGGTCTTTGGGTAAATATTGAGTAAAATCCTAGGCAAAAAGTA TCAAAGGGTTTTCATCGGAGAAATCGATGACAGTAcgtaattaaaaagaa aatttggcgagaatttcaaaatacattttaaagattttactaGCCCTGAG CCTCAATTGTCTCAATTGTATTTAACTTTCAtcagtttttatttcaaaat aaattatatTCTGACATTTAGATAGTTCAGCCNCTGACTTTCGTTTACAG TGACGTCATCTGCCGTTCTGGTCTGGAGATTATCCTCGTGTTGTTCGGTT TTTGCATGATCTGAAAAGTGAAAACCAAAAGAGATTTGATTATTTTGACG AGTAATTATTGTTATGTGCTGGACTCTGTTCCGATACTCGTACAAGCCCC CTTGATATCTATTCTGGATACGcgtaaatcattttcataacGGGANCGCG AAAAGTTCTTTTCACAGATACCacattgaaatttcttttcacCCAAATGT GTTTGTTGGTGAGCAACCATGTTACTCCGCCGATGAAACGCGCGGCCACA AACGTCACATGAGAACGAGCGTTCTTCAGTGTGCTTAGATTTGATATGTT GAGTAAGATTCGATGAAATCGCGAAAGATTTGTCGCATTGGTCACACGCA TACGGTTTCTCCGCAGTGTGAGTTCGAACATGCATTTTCAGGTTTCCAGA TTGTGTAAATGTCTTTCCACACACTGTGCACTCATACGGTCGTTCTTGAG AATGTGATCTAAGATGTGTTTTCAAACCACTCGATTGtacaaaagattta ccacaaaCATCGCATATAAACGGGCGTTCATTTGTATGAGTCCGCTGGTG AGCTTGTAAATGTGAAGCCTGTATGAATCGCTTCCCACAAACATCGCACA AGTATGGCCGCACGTTATTGTGTACCCTTTTATGTAGTGTGTATTGATGT TGTGATGAAAACgttttaccacattctttaCACTCATGTATACATATCGT TTTCTCTTGATGTAACAACAAGTAACGtttctttttgaataattttccac ACCGTTCGCAGTCAAATTTCTCGGTCTCGATAACTTTCTCATCGCTTTTT GTAGTACAAATTCCAGATCTCCCTTTCTTATGGTCTGTATTTTTACCACT AACATTACACTTCACTTCATCATTCCCAACTTTCTCCTTCGCATTGTTAT TCTCTTTAGTGGGGTCGATAGCAGCTTTCCAGACTGTACAGTCTATTTCA CGTTTTTGGGGTATCGAGACTTTTCTTTCTCCTCCAGTCCGAGGTTTATA CTTCTTTGCCATTTTGCGTTCGGGTtcgccatcttgtttttgcGTTTCTT TCTTTGTACAGATAGATTCATTATCGGCCTTccgtttttttttagtttct gaTTTTAAAGGAATTTTTACAAACTGACTTTCGTTTACAGTGACGTCATC TGCCGTTCTGGTCTGGAGATTATCCTCGTGTTGTTCGGTTTTTGCATGAT CTGAA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00057065TCONS_00057065Clytia hemisphaericatranscript
TCONS_00057066TCONS_00057066Clytia hemisphaericatranscript
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_285supercontigscaffold_285:283799..289703 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
13.33 11.05 3.94 2.83 8.64 6.12 8.47 10.47 5.34 5.45 9.98 4.91 6.6 4.53 4.5 3.99 5.28 6.21 13.42 43.05 5.16 8.75 16.14 14.13 8.83 9.16 2.23 8.4 12.41 13.32