XLOC_035962 (gene) - C. hemisphaerica

Overview
NameXLOC_035962
Unique NameXLOC_035962
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_285:614713..623798+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_035962 ID=XLOC_035962|Name=XLOC_035962|organism=Clytia hemisphaerica|type=gene|length=9086bp|location=Sequence derived from alignment at scaffold_285:614713..623798+ (Clytia hemisphaerica)
atttaaaatggtAGCTGTTTGGAACATTGGAGTCTAGATTATTGCAATAT AATGACGTTGTTGGAAATGTAAATAAGAGTGGTTTTGGCTTTAAAATGGA GCGCCCAATTTTGATCTACGCTGGTAAGGTTGGTTCTTCATGCCGATTAC AAAAGTTAAGAATTTTGATCTCTACAACAATATAGCCTTTTGTCGCGAGT CTTTCCTTGGAAATTTGGATTATGATGTACTCTaaactttatgaaaaaaa taaatatacccGCGCAGAGATGTTTGCCATGGGTTNGCGAGTCTTTCCTT GGAAATTTGGATTATGATGTACTCTaaactttatgaaaaaaataaatata cccGCGCAGAGATGTTTGCCATGGGTTCTATAAGGGTCGGCTTTGAAGGT CAACTCTGGTGCACCTAGAAGAATTGCTTAACTTAGGTGACAATGGAGTG AAGGGTTATCGGTCGATTATTCGTTGATTTGATTTGGTCTCAGGTGATGT AACCCATACGGTACAAAACGTCTTTCTAGCGTTCGTAACATCTTTGTGAT GTTAGGTAAATGGTTAAAAATGTATGCAAGCTAGGAATCTAATCAAGCTC TTTAAGTAGAATGTGATCATCTCCAggtctaaaatcaaaataaaagcaaG ATACTGTAGATATGTGAatacattttttgatttttacgaattttaattct tgcttttattttgattttagaccCGAAGATGATCAAGATTTGATCGAAAT ATATATATTATCAATAAATAATAATGATACCGTTGTTGGTTCTTATTTCT TCGACATTCATCACTTGCCACAATGTTTTCATCCGGGTTTTCATCAAATC GTTTCTTTAAGTAGAATTTTCCTTTAATCTATTCTCATCTTGTTTTCAAG CGATATGTTGTTGGATATGTATCATCTCATCACACACTGTTTTAGAAGAA TTCTATTGCAAAGATTCGAATGTTGAGTATGGTCGTTCTTTGAAAGGTGG TAATGCTGCTGGATTCTTTGATAATTATggcaaaactaaaaatattcagG TTTGTATTATGTAATGATTGAAAAAGGCTTCTGTGATTTGACAATTCAGT GATTTTAAGGCCGATGTCCACTTTTGTGCGAAATACGCGACAGTTTTTTA CTCAACCGTTATTGCCTGAAGAAATTacttcataaaaagtttcgcgcaaa caaagttcaacttttttcaaccattacgtcaattttgaccaatggaattg cttcttttttcaaccgaccaatgaccttacagaAACGTTAAAAAGTTCTT CTCATTTCGCGTGAAAGTGGAGACCGTCCTTTATACTTATTCTGTTAATC CGTTGCAGGAAGGGGAAAATTTATGTATCGTCGCTTGCAAGTGTTTGAAT GTAAAACTAGATACTAAGGCTtgggaaagaaaaagccttgttaaaaagtt atttttccttttcattcgCGTTTCACTGACTATACATTAGTTAGTTAATT AGCCCTACTAGTATGTACCCTGAACAAGAATTTCTAAAGATATAATAGTT ACTGGCTTTGTGATAAAGTTTCCTGTTTCCTTATTAGGAATGTACATTGA AATGTTGTGATGCAAAGAAATGCAACGTTGCAGTAATGGATGGCCGAACC AAAATATGCATGGGTGTCCGTTGCTTCAACGAAACGTCCTGCTCAACAGT CCCCGCTACGAAAGGAGAGGAAGAGCTACAGATTGCACAACTGACTGGTA GATCGCTTGATAAAAATGTCACTATAGGTGAGtagaatttctaaaaaaaa ttccccaccgaatttctttttcataccGGCCCGTTTGGGTTGTTCTAGGG TTGGAAAATCTGGGATATGCGGACCGAACCTCAgaaaaccgacccttatt aTCTTTTGTGAAAAAGTTGACTCTAGTAAGGCTATTACCCTAAAAGAGAT CAAAAAGGGGGAAACTCCAACCCtaagtaaaatattttaattttttattg tttttgtaaCCATTAGAGTTACTTAGAAAGGTAAAAAACCGACCTTTATC TTTCGAAAATAGCTTTTTTTGCCAGAGAACCCACCCGTGCTATGATATGT AAAGACTTTAGTATAAAAAAGTTATCGTTCTTGATTTTTCTTAGTATTTG AATTCTATATATTGGTAGTCAGATAAAAATCTGAATTCGCAAATATCTTC CAAAGCAGAACAAAGTATAGACACATTCAAATCTCTATTCAAATGTCGAA GGTAGTTCAAATGTAGGTTCCCCGGTCTTCCTCATCTAATCATTTATCTA ATTCGTTAAAAATTTCGATCTCTGCAACAATATAGCCTTTTGTCATGAGT CTTTCCTTGGAAATTTGGATTATGATGTACTCTaaactttatgaaaaaaa aattacccgcGCAGAGAGATGTTTGCCATGGGTgttctctaagggtcggt tttagGATGTCCCATCTGCAGATACCCGTCATtggccaaccctagtaccc caaGAAAAATTTAGGTGAAAATGGAGTCACGCGGTATCGGTCGATTATTT GTTGTATTGCTTTGGTCTcgctagcctatactagacgtcacccgcatttt tttctacgcaatcaATATCTATTctactttgcgactttttcgaatgtctg GACTTTTTAATTCCTTTTAGACAAAAAGACGGCTAAATTAAAATCCAACT TTACAGAAGACAGATGTCCGACAAATGAAATCATGTATAACATGAAATTG TCCGAAGGCTTACATGCCGGACGCTTCACTGATATCGGACGTGTCCGAAG TATTAAGACGTGTGTTCGGTATTGTTGTGGTGATGCTACGGAATGCGATT TAGCCTTTATGCTTGGTAAAAggtgtgatttctttttttgtaatttgaaa ccTCTTTAGGTCGAATCCATTTTATCATACAACCAAAAACACTGGGTCCC TTAGCTTGAAGCTTATTGACACCCCCTTcttcacagacccactgggaccc cttcccactggaaaacttGGCCGAAacatcgtccccagtggaaaattgta ctccaatttttgtccccgctgaacttgatcaaataaatcaatccccactg caaaatattataacAATATGGGATTATCaatcccatcgagtttcagtccg ttattttaccccccccctcccttactggctgaaaaaatcccaccgggtct gtgagaagggggtgtttgaAGGTCTGACATGGAATTCTTATCGCGGATAT GCTATTCTGCAAACAACTTTagtttacttttgtttttgaatcTCTCTTAC TAGAACAATTTCTTACCAAGGTACCACAAAATTCTTCATTGACATTCAAA CCATAGGATCACCTTGAAGAACATTGCTAGGTCTAAcaaatagtttttga aaatgaatcaataaaaatgttttcaattttagatGTTATTTAGTGAAATG CTACAACGAAGAGAAGTGTTCGCCTCTTCCAGCATCCGATTATTCGTTTG AACAAAAGATGGCGTTTGTTTCACCTTGGCTCTTTGACAAGCGAAAGAAA ATTAGTACGTTTTTGCTTGACTGGATATCTTTACAGAATTTTACTAACCT ATCATTACTGGCTGCCTAGAGACagtctacaatcatggtcgtaatatttg agaaaaaaagggaagTTCNATCATTACTGGCTGCCTAGAGAcaatctaca atcatggtcgtaatatttgagaaaaaagggaagttCCTACGAAATCTTAC AAACACAAACGATTAAAATGGTCAAATCGGGcttagaatatagcctggaa gtctataagcctctcccgaattgaaatacttaaataaattcatcaatcag cccaaaagcgactttctcgcccgaaaaACGTGgaaatagattttgaccat gattgtagtccTATTTGATTTCTGATATGACTTTTATTTTCATCGGTAAG CTcctacttttcaatttttttgcagtgatgatTTTCCAGTAATTCATTAA AAACTTACCGACCTTCCTGTATACCCTTGGAGCCCCCACCCCTCAACTAG TGAATCAAGGCTAATACTCAAAGATATTGTCGTGTGTGTTTTGACGTTTA CTGTTATGTTCTAGAAAAATTAATAtccaaacttttatttttagtgAAAG TCCCTTCAGGGCTCCAGCAACATCATCTGCAATGTACTCAATCAAAAGTT TATGAGAAATCAAAGCTTTTTGGAGGAAATGATGCCGGTAAATTTACACA TGTTGGGAAAGTCGGCAAAATGCATATCTGCTCTAAAATGTGTTGTGAAA ATCATGATTGTGACTTAGCGTAAGTTATGTTTTAGTTAAGTATGAGTTTT AAGGTAGTCTACCTATTCACCTATGTCAGATTTCAATTGATGCTTTTagg ttgattttttttaaagttttaaagaaattcaaaataaatttttttaatgt tctGAGACTTCTTCTAGAGTATACGATCcacaaaatcactaaaaaaggga atagtttaggagaggcgtgataaattcgggtggtgagtaagcagtggcgg agatgtttacagtattcaaaaactctaccgccacttttttcccgtaaacc gccctgacgccctaaaTATTTCCCGCGTTTGCTGACCTCTAATgctaaac ggacgatagcatcgtctacttCTAGAGTTGTTTAAAACAGTTTGTTTGAa agtatgaaaaatgaaaatgtatcgAGGGGATTGTACGGGGAGGCTAACGC ACACCGAAATACAGACACATATATTTCTCGGATCACCGACAACACCGAca gaaaaaattgctaaaatttttATCCCGGTgtgaaaataccctggaatttc agcccatttaactttccatttgcctatgacctatattaggggtagaaacc aatcaagtagtcagacggcttagaagtaagtgtgagtcggtagatataag tttggcatgaaattatggctaatcctcgaataagaagttttggggaaaat ttgtcccgataactacaatattagtataaataagtgaggatcgcctacaa ccataactgcagggagggGAGAGGTAAAATATTCCATCCTGTCAGCTTCC AACTAGAGCGTCGACTTGAACAGGGAGATGTGATGGCCATCATTTGAACA CGACGTCACATGGCCattagcaaagtagactcagttggcgaagggcggcc acccagccattcgaatactgtatatagcgcttatcaaataaaagttaaac cacGATTTACcctgtgttaaatccaaatttaactttccatttgcctatga ccaaactattacttttttttacttcaaacgCCGAAACACAGACGGAAATG AGTGCTAATACCGTCCCATCGTCAAACCCATACGCCCTATGTATTGCATC TTTTAAATTGTTCAATTTTTTAGCTACATGTTTGGTAAAGATTGCTTCTT GGTCAAATGTTACTCTGAGAAAGGATGTCGTGTGGTACCTGATGAAGATT TAAGGAAATCAACTGACTCCTCGCTTGACAAACAGATACAATACGTCATC AAACGAAAATTTGGTGTCAAAGTTGGAGAAGGTAAGGTTTtggtaaaatg tttttcaattgtTCCTTTATTTTGAAGGGAGGGGGAATCTCGGAGGTAAT TTCCATAAGATTGGTTGCTTGGTTTTAAATTGAAAACTAGAGCTTCCCGC CGTAGAAGCTCTCCAACCTAAAGACCTGAACTATGAAAGTAATATGCTTT CTAAAACNTCGATTGTTCCTTCATTTTGAAGGGAGGTGGAATCTCGAAGG TAATTTCCATAAGATTGATTGCTTGGTTTTAAATTGAAAACTAGAGCTTC CCGCCGTAGAAGCTCTCCAACCTAAAGACCTGAATTATGGAAGTAATATA GTGGAGAGTCTTTAACAACTAATACAACCTGTAGAACTACTCGAATGTCC CCTTTACTGAGCaggttttatggtcccttcagttaataaGGCCTTATAAA CCTTGTCATTACTCTAAATTTCCATAACTCAAATTTGTGTCCCCGTGCGT GTTTGTGTTATGTAGCTTCAGTATTAATCCGGTAAAGCCTACGTGCGGTT TGTGGGTTTTTTGTAAAACTTGATAGAATAGACCTTATcgtagtttttga tttttctgaaacaGCGATGCATTGGGGGATTGTTTtaggggtattacaat agaattccctcgaggaataccatcgaaacaatcccacaatgcatcgcttt tttagaaaaatcaaaaactccgataagatctattaaaAGCGATCGATCTA AAACAGGCTTACCATTTTTCATTCAATAGATGGAAAAACCCAAGACGGTC CAAGAGACACTTACGTAGTTGGTTAGTTTCTAaaagtttgtaaaatataa aagtaaaacaaaaaagaaatttatttttctcaatAGATGGAAAAATCCAA GACGGTAAAGAGACATGTGGTATTGATGGCAATGTGAGGAATAAAACGAT TCTGGTCAAAGGCATGCTTGCTGGTTCTTTGAAACGTCAACGCAATGTGA AGGAAATGAACCATTGTCTCGAAAAATGCTGCACTGAAAAAAGGTAAaat ccattgagtttcaagcccgaagggctagaggcgagactcctggatgggaa atgaaaccacctatttcccatccagaacgcctgcGTGTAGTTTTTGCACA AAGggcggattgaaactaaaatctaccgctagatttcaaaaaatatagtt ctccaaaacaaaggaaccactagatacaatccgtcgtcatgattacggcg cgttctatgcaGGTTTTGAATGGGAAATAACTAGCTTCAATTCCTCTTGC CTGaagagggttaaagtttcgcctctagcccttcgggcttgaaactcaat ggtaaaAGCCAAATCTCAGAAGAAGATATACTCTGAATCTTAGACATCTA CGAAAACGCAGGAAGTATAGAAATAATCGGTTTGTGAATGTCAGTAGCCT AAAGAAGATCCAGATAACCCGCTCACACACTTGCTCTTATTTACTTTTGC AAGCAAAAGGCAATGcgattttttgaatgttttgagcTTTTTGGAATCGT CACATTCACCACAATCCTTTAAAAGAAAAGTCTGATTCTAGCTCTAGCAG AATGGGTGATCTGTTATAGATTTAATATTTTTCCTACCATGCGCGAGTTT AAAATATGTATTGAATGAATAATACAAAGATTTAGGGTGTAGCATGAATA CTGATGGCCCATTCTTGGTTTCTACAAATTAAGCCAATCCAAGAATCTCG GTAGAGCGTTTAAGGGTGTACCGAATATAGTATGTATTTTAAACAACTGG ATATGGAAATGCTATTTCAAATGCAAATATAAAATGCTCTCAACCTCGCC CctaattgggcttttccagaaagagATTTTCCCCCCACtattgaggatat tgatttttcgaagtatcgaaccccctggatatcctacctTATTAGTAAAG AACCCCTGGATATACACTCTTAAagtatgctcaaccccctggtcATCCTA TCTTATAAAAAtacttacccctggatatcgtattttttcttgaaaagaca ctttaccccctggatatccgatatcttCAACAGGAGGGggcacagactat ttctggaaaagcccattgtccTTGCTTTTTTGACAATATAAATTCATTGT ATCTAGATGTCACGTGGCAATGATGATGGGACCTATCTGTTATTCAATGG AATGCGCAACCAAGGATGGTTGTAAACCAAAAGCGGCACCAAAATCCATG ATGAATCAGAATCCAACAATTGCTTACGTCAAACGTGGATCCATTTCCAT GGGTAAGGTTCTGATGAAGGAAGATAGAAAAACCTTCATCAATTAagttg ggatgagctggagtttttataagatacttcaatcattggtcatttgaagt gatagagatgatacgcgctctttagaaaaagtaacaaaattgttttatta ctggttaacgaccaaccaaatcaaataagagcttgtaaaaactccagctt gtcccattaAGTTAGGCCCAAATGAATCATTTCCttgacaaaaaaagatt tttttgttttcgattttcgattttcaatcTAATCATTACGGCACCTTCTT CTCACTGACCAGGTATGATTTTTCCAGAGaaaaataatggactgaaaTCT GACGGCGATTgctattcccatgtttttatgACTTGGGAtttaaatgaaat tgttttcaagtaagaaaattcagtggggatggaaaaatagcacGAATtct tgcagtgaggatttttttatttgattacttTCAGCGGGACacaaattgga gtataattatCCACTGGGGAtgattttttgccctttttttcAGTTGCAGG GGGAACCAGTGGGTTCGTGAGAAAGGGCTgttttatgtaaaaacaaaccA CGAGAGTCACACAACTTGAATAGGCAATAAGTGTCTTTAAATCTTAACGT AGAAGATTCATTCCAAGCATAAACTTCATTGGTTGTATGATGCAAAAATG CAAAATCAAATCTTGCTATTACACTTCAACTATTTTTTTTCAGCGCCCTG ATGAAAGTAATTGATTGAAACGTAAAAAATTGAGGATATAGTGGACCATG TTGCTGGTTATTGGTGCAAAATGTTTGTTGTACACagaaaatgaaatcaa agttttgCGGCAAGACTTATCGCCTAGAAAAATTTGAGCCTTATTTGAGG TTTTTGTATTATAATAAGCTTAACGCTAAGTTAGATATGAATATACTACA ATCGCGGTTATAATTTAtgtgttttgagatttttggggagtttaatgatt ttcaaaaatacaaagttcaGAATTAATTGCGATTTTATTGGTCATTTCGA TTTCCGAGAGGTTTAGTGGCTTCCAGATTACATTCTcagctttatttgaa aacttttgagcTACTTGAGTCTAATTTTAAAACCTCTTCATAACAGAGAT TTTTTCTTATGAAGATAATTGAAGTATAAAATTTTTATGGTATGGCTTTT TCATAAAATTGAATTCATGAAGAGATTATTGAGTCG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00057086TCONS_00057086Clytia hemisphaericatranscript
TCONS_00057087TCONS_00057087Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00057086-proteinTCONS_00057086-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_285supercontigscaffold_285:614713..623798 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.23 0.53 0.09 0.17 0.16 0.08 28.08 29.42 11.2 6.04 22.4 21.22 19.9 16.29 13.83 34.1 27.42 27.09 0.33 0.04 14.24 15.12 13.14 12.31 15.02 17.39 5.22 5.63 0.02 0.13