XLOC_036142 (gene) - C. hemisphaerica

Overview
NameXLOC_036142
Unique NameXLOC_036142
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_288:238015..245843-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_036142 ID=XLOC_036142|Name=XLOC_036142|organism=Clytia hemisphaerica|type=gene|length=7829bp|location=Sequence derived from alignment at scaffold_288:238015..245843- (Clytia hemisphaerica)
GAGTCTTTATTTTATTTCTATATTTCGCGGCATTTCATTGGCGGGTTCTT CAAACATGTGACTTCGCGTCGTTTCGAATGTAAACACAGAAAGAGTGACA AGCTGACGCACAGGCTGACGAACATCTTTTTTCTTTGCATAGAGCAAGCA AAAGTTAAAATCATTTTGAAGTGGTGGGAGGAGTAACCAAAGAAGTAGAA TAATGTCTGATCATCAAGGTATACTTCAATTTCTCGTTTTGCTTTTTTAA ACTGCGATCCTAGCTGTTTTTATATGCCTATCCGTCGTTAAAATACAGTC AGGTGCAGGTACCGTCCAAGAAATTGCCTCCTCGGGGTACCTAAGGCAGT TAGGCACTCCCCAATGGTTACCATATGAGGTTTCACCCCTTTAACGTAAA TGTTTTCTAGTTTTTTTTTTGAAGCATTTTGATTTAGAATATGAGATGGG GCATGCAGTTTAAGGGAGCCTTCCAAACTCAGACTTGCCATGGAAAAGTC AAATGGGCGTTTTGATTTCCAACAGGACCCTGCCGACGCACTGGACTGTC CGGTGTATTTGTCCGGTGGCAAAAAGTATCCTTTCGCTACACCGGACGCA ATAATTCTGGTGTCATTCCGGTGTTGCATATAGGGAATTTTGGACGCCGG ACATTTATGAAACAAAAAATTAAGAAACACTGTGACGCACACCGGACTGG CCATGTCAGGTGTTTTGATTGTCCGGTGGGAAAAATATCCTTCTCCGACA CCGGACATCCGACTTCCTTAAATCCGGTGTAGAAATTGTCCGGTGGTAAA AAAAATTCTCATTTTACACCGGACTTTCGCGTGTCCGGTGCTCGTTAGGT CCGGTGCGTCGGCAGGGTCCTTTTCCAACCCCTCTAGAGTCAAGAGTGCG AACGGCCCCAGTGCACAAACGAACGTCTTTGAACTTGAAAAAAACAACCA AAAACAAACTTCTATAGAATTTCCTTTGTGCAGCAGAATCCTCAAACTGT CCCTTGCAATCTCTCCAAAAATTAAAATAAATGGAGCACAAGAACAACAC CAAACCAATTTTGAACGAGGCCAAGTAAAAAAAAATCACAAAATTCGGGA TTTTTGTAAACATTGCTGATTGCAAGAGGAAATGTNCCAAGTAAAAAAAA ATCACGAAATTCGGGATTTTTGTAAACATGGCTGCTTGCAAGAGGAAATG TTTTTATGAGAAGATTTGCGCAAGAAGAGTTCTGAAAATGACTTTCCTCT TTTAAAAACCTGTTATCTTCCATCACACAAGATTTCATTGAAACATGTTA GCTCATTAATTCAAAATCAAAAGAAACATATCACCAGTAGTTGATATAAA AAGGGTCCAGTCCATGAATGATCCAAACACCATATTCAAAATGAAGACAT TGCAACGTCGAAACATTCCAAAGAAACAAAAGGAACAAAATGGCTGTTAA CAGGAAGTCTAAATACATGTGGCTGATGTTTTGATGTGGTTTTTAGTTTT GAAAGTCTTTAGAGCTTGTAAAAGAGTTTTTATGGAAAGTTAATTATGTG TGTTTGCCTGGGTTTACAAAGTTCAGAAAGTCTGTCAANTAGAGCTTGTA AAAGAGTTTTTATGGAAAGTTAATTATGTGTGTTTGCCTGGGTTTACAAA GTTCAAAAAGTCTGTCATCAAGGGTTCACACACAGAGTGTTCATAACATT CTGTGTCAGACTAATCTACCTGCACCAAGCTCTATAATCTTAAAACTTTG TGAGGTAAGGTATTTTTTGTTTTTTCTAAGATTATGAGCTTGGATTCCCA GGCTAAAGTATTACCTGCAAGTGGAGCTCTAATTTTTTCTTTTGAAAGAT CATTCGTACACTGGTTCCTCGTTCGCGGACTGGGTCCAAATAACGCTCGC TTTAACGACTTATTATTCCATGAAGAAGCTTTAAAATAAAGTGAAAACAA ACTGAAAGAAGGACTTCAAGCTAATCTACGAGATGGTCTAAAAGGATTTA TGTAAAAACCAAAAGTAAGTGAGAAAAGTGAAAAATGAGTTTGGCGTTTG TGCACTGGGCACCCCCCTCTACCCCTAGGGCTAGGCCGTGGCCAGTGGAT GGTTAAAATGTTCAAAAATAAAGAAAAAAATCAAAATGTCTGTGACCAAG CTTTGGCAATTGGTTTTGGTCAATTTGAGGGTGCTGAATCCGAATTTGAA TAATACCATTGTTAATGTTTTAGCGTAATTTGTGATTTTTTGCGTTTCCA GGCAATCTGGCTTGAAGGCTTGAAATATCATGATTTTTGGGGGGTCTTAA AATTAAAAAAAAGACCTACACCACGTGATATATATACATAGTTTGCACCC CCCCCTTTTTAATAGGGGGGGATGCCAACTTTCTGGAGGGCCTTTGTAGG GGGGGTACCGAGATCTGCCGAAAAAACTAGGGGGGATGGGAATGTAGGGG GGGATCAAATAAAAAAGGGGGGGTTTGGAAATTTTGGTCAATTTTCTAAT CAAATACAAGTAAGTTAGTTATATTCTGTCATTGTTGGCTCGTGACTATA ATACTTCATACTCTTTCTTGTTGATAATTTTGCTGGTAGGCGGGAAAGCG AGTTTCCTTCGAAACGGATTTTCTGTAAAAAAAAAAGGGGGGATAAGATT TCATTACAAAAGGGGGGGATGGGTATATAGGGGGGGATGAAATAAACCTA GGGGGGTTCATACCCCTCTGCAAACTATGATATATAGCTCTTCAAACTGA GCAAAAAATGTATTATATCAAAGTCCCAACTTCTCTAGCTAGATCAAAAG TTATTGGCCTATTTTTGGTCAAAAACTGATGGAAAACAGGGAATTTTCCC ACGATTTGCATAATTTATGCAAAATTGAACACCTTTTACCCACATGGCCC CTTCAAATAACGTCAATCGTGGTAATCAAACTTGATCTCAAAATATTCTT TAAACCCTTCTCCCATCACTCACTATAAATATTCCATCATTGTTTTGTCA GCCATCTATATTTTTGCTATGGCTCGCATGCATAGTTTACATTTAAAAAT AACGGAGATAATTTCTAAACTTTTCCACCAATAATCCTGGAATTTTTTAT CTCCATAATATAAAGCGACAGAAAAAACCGGCTGTCTGCAAAAATTTTTG GGCTGCGCGGACCGTCAAAGAAAGAGAACCCGAGGCATAAACATAGGGCT GTTTGTTATGGTTTTCAAAACAGCAAAAGCGACCAAAAACAAACATGCCA AAGTAACATTTGGCATGGAATGGACTTCTCTAAAATTGATTTTTCTGGTG AAAATTCCTTTGCCATGAAAAAACATCAACAAATTATACTCATACTCCCC CCCCCCTAAACGTCCATTTGACGTTCTCTATGGCAAGTCTGAGTTTGGAA GGCTCCCCTTAGTCACACTAGGAAATCAAGCTTTCAGAAAAAACATCAGT CATCTACAGGATGTATTTGCAACAACAAAGATGAGAGTTATCTGAACAAA GTTCAAGATCCCCAATTTAATCACACTCACGCTGCTCACATCTTGAGATC TTTTTCTTGTGTGTGCGTGATTGACATGTCAAAGTTACCAAGTGTCGGTA TCAGATCTCACATCTTTTTATTGGGAAGTTGTTCTTCAAATTAGTTTTCA AGGTTGGCTTGGTTCAAATTTTTTCATCTATAGCTCAAAAGGTAATTTTC CCTGTTTCATTCGGGAGAATGTAACGGTCTTTTGAATAATAAATTACTCC AGCCAGTACAAACATATTGAATTTTCTTGTACCTTAGTAACAGCTGTGTT GTAAAAGACAAATCAATTAAATGACGTTTCTGCTGGAGTTCATTAGTTCA TCTAAGCCTACTCCCAAACCCTGTGTAATATTTGGTTAATACTTGTTAAT AATTATTTGTTTATGATCGCAGAGAGCTGTTTCATTTTTTTCATCTGGTA AACTAAAGTTTGTGAGTGAATTTTAGGCCAAGATAAAAAGTAGGTTTGTT TTGGGAAATGTAGACAACAAAAACATATATCACTCATGCTAAAATTGCTG TAATTCTTAAATCTTAATTGAACTAGTTTTAAGTCACTTTACAAGTTTTA TTTTTCATTTTTAGGTGGAAAGGCTTTTGGCCAACTCAAAAAACAACAAG AATTGAGTTTAGATGAAATTAACAAGGTAAGCCATTAACAGTATTCTGAT CTATACCTTCTAGTAATTTAATTTTAGTCTTTCACAGAACTTTTCATATC GATTACCTTAATTTGGATTAAAATAGCTCTATTTTTAAATCNTTAATCTT TCACAGAACTTTTCATATTGATTACCCTAATTTGGATTAAAGTAGCTCTA TTTTTAAATCCTATTTCAAAGGAGGACATGATCCATTCAGAAGCAATTCA AAGATTATTTGAAGTCCTTTGAAATGAAAACTGTTTTTAAAGCCTATTTA GGATTATGGGCCTATTTCTATTAAGGATTTCCTTTCCATTAAGCACAATT TTTAAGTAGTTGTAACCCATATATATATTTTTTTTATTTTGACATATATT CTTTACTCCATCTTCTAACTACCGTTTTTTATTAAAACACATTACTTTTC ACTCATTAAAAAAACACCTGGGATTGCGATTTATTGGGTCTATAACAAGC CTTACAGTATGATTGATTTCTACGTTTATTTAGTTTTTTTAGAAGATTTT ATTCAAACCTTCTGTCACAGCAATTAAAATGTGATAAAAATGAAAGTAAA ATAATTGTATTTTTTCTTCTTAACAGACTTATTTAGAAGATGAAGATTAT CAAGATGAAGAAGAATATCCAGATCTCCAAGGATCTTTGGTTACCTATAA AAGTAAGTCACCATTCTTCATATGTTGCCTTTCAGAGAATAGGAGGTGAT CTTGTATTTCCTTGATTGGCTTTTGAAAGAAAAAGCTTTTGCAGAACCAT ATTTTAGGGAAAATTATATTTTTTCTCCTTAGAAAAAGTTATGATACTAC AATGCAAATGCTAACATTTAGGATTTGTAAAGAAAAACGTAATTCCTTTC AAGTGGATCAAAAGTTTAAGGCTTCAAAAAGAGAATAATTCCAACTTTTT CATGTTTGGGTGTCTGCTTTGGTTAAGATTAACAATGACTGGGTCCTAAT GAAAAGAAAAATATTTTAATTTTCAGAACAATTTATGGAGTTTGATTTGG ACAACTCTGGTGATATTGGTAAGTTCATTCACTACTCAGTGTTTGATTGC TGGTTTAAATTCGCTATTAGAAGTAACAACTGACTCCGATACCGAAAGAT CTTACCCATATTTTTTATATCTTCTGTAGTATCGTCTAAGCTTATTTCTT TTTTCCGATAATTTTGAGTTTAGTTCTATTCCAATCAATGTTTTTTGGAC CTACCTCCGGGTACCCCGGTGGAGGTTCTATAAATTAACCCATGTCTGTT GGTCCGTCCGTTTGTTCGTCCGTCCGTCCGTCTGTTACCAGCTTTTCTCA GGATTGGCTCATTAGTTTTTTCTGATTTTTTGCACAATGATGCAAAATGG CAATGCCCAGAACGTGACGGAGCCCGATTTTTGAGCAAAAATTTATTTGG GCAAAGTTGGGCCAAAAACTGCCTAAAAATAGGGTTTTTTGGACTTTGTG CAAAATCCTGTCATTACTTCTTTCTGATTTTTTGTACAAAGTTGGAGGGC AAGATTCCTTAAAGAATGGCTGAAGTGGTTTTTGCTGGAAAATTCTTATT CGCCTTAAAAAACGGATTTTCGTATTTTTGGGGAAATTCCCTTTAACCAA ATAAGAAAATATAGCTTTTCTCAATATTGACTCATAATTTTTTCTGATTC TTTGCACAATGATGCAAAATGGCAATGCCCAAAATGTGAATAAGCCAGAT TTTTAAGGAAAATTTTTTTGGGCAAATTTGGGCCAAAAACAGCTTAAAAG GTTTTTTGGGCCTGAATGGCTTAAGTGATTTTCGTATTTGGGGAAATTCC TTTTTACCATTTTACATTATTCAACACACAAGCTTTATTTTTCCATTCTG AATTTTTGTACAATTATTGTCACTTTTTTCTTATTTTCATCTGATGTTAA TCATTAGGTAGGTCCATTCAGCATGTTGCTTGTTTTGTCTAGACTTGATG GAGTTGAAAATGATGATGGAGAAATTAGGCCAAGCCAAAACTCATTTAGA ATTAAAGAAAATGATTGCTGAAGTCGATCGTGAGAATAGAGGTATGATAT TCTTTTTCATTGAAAATTTTCATTGATTATTTACCCTTAAGACTATTTAT TTCACGCTGATGAAATCATCGAGACGAAAAAATGGAAAATTAAAATGAAC GATTTACTCGTATCGTTTAATCTTTTGGAACAAATTCTAAAGAAATAGGC GTGTCGTTTTTTGAATTTTAAATCAAAGAAGATAAAAAGCCTTTCAAAAT GACACATTTCCATGTTTTTAGCATGTTGCTTCATAGACTTCGTGTTATTT CATGTTTTCTTGACATTCAATGCGTCATCGTTCAACATTTTGATGTGTTT GATCTAACAAATTTACTTTGTTTACATTCCGCAGGTGCAATTTCGTACAA TGATTTCTTGTTCATGATGTTAGGAAAGAAAAGCTCTGTCCTTAAGCTGT AAGTTTTTACAAAATTCTTTCACGTTGTAAGGAATCTCGATACTTACGTA CAAGGTTGAAGTGATGCCCATCGGATGAATTTTAAAATCGCCTGATCTTC GAGTCTCAGAAATTTCTTCAAAAACGTTGATACTGAACAAAATTTCCAGC TCAAACTGTGTACCGAAGAATCCTAAATTTGCGGTTGTAAGAAAATTGTT TCTTACAAAAAACTCGTAAGCCAATGGTTTATAATAAATGGAAGAATATT CATACTGAGAATGTCGAATCAGACTACGCTATGCACTTTTCCAAGGTTCA GAGAGGAGGAGTAATCAATGTTTCGTTTACTAATCCAAGATAATCCTTAC TTTCAGGATTAAATTTCACGTTTGAAACTGTTTCGTTGTTCAGACGTGAA ATACAGTATTTGCTTAGTTCAAAATAATGTCAATTTTTCTCGACCTTTTA AAGACGGGAAATGGTTTATTTACGTATAGTTAGTTTCTTGCAAATCAAAC ATTTCAAATCCCATACATACCTTAGAATCAAATGTCTCACTTTGCAACAC GCAACTAAAATTCTTTTCCAGCTAATTACGAAATCACACTTCAGTTTAGC AAATAAAGAGAGATTCAAATCATCCTTCAGTCACAGTCAGACACGGAGTA AGATAAAAAATTTATGAACTTAAATCTTTTTTTCTACAGAATTTTGAAGT TCGAAAAAGCGATGGCTGGACCTGAAAAGAAAACAGGTGTCGCTCCGAAA CGAGACCTTTCATCACTCCCTTGAACTACCACGAAGCANAACAGGTGTCG CTCCGAAACGAGACCTTTCATCACTCCCTTGAACGACCACGAAGCATTTT TTCATATTATCCATACAACTGCTCATTACAATCTGATGTTTGCTGTACTT TTATATCGAATACTCAACTTGTCACAAAGAATTCCATGCAACATTATAAA CCAGTACCAGAAGTATAAAAGGGTCCCTTCGTAAGCGTCGAACATGTGAC ATTAAATCAGCGCTTTTATCATTTATTTCACCATGCAATTTTATTATTAT GTATAATCAAAGCAATCTTATTATTATCGTGTAATTGTAAATATTTTATT AGGGTATTACGTTTCATTGTATTATTTTCCCCTAGAACAAACTTTCGACC AGACATTTTGATATTAAACCGAAGCTTGG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00057351TCONS_00057351Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00057351-proteinTCONS_00057351-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_288supercontigscaffold_288:238015..245843 -
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
AIF1Lallograft inflammatory factor 1-like isoform 3 Homo Sapiens
AIF1allograft inflammatory factor 1 isoform 3 Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
148.65 134.19 375.97 381.97 227.81 173.65 232.37 235.84 238.66 233.69 214.65 149.62 218.86 190.41 150.88 152.57 187.03 204.42 155.63 177.73 180.65 175.78 134.85 142.17 227.62 212.47 174.49 164.76 189.9 181.05