XLOC_036144 (gene) - C. hemisphaerica

Overview
NameXLOC_036144
Unique NameXLOC_036144
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_288:368643..372615-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_036144 ID=XLOC_036144|Name=XLOC_036144|organism=Clytia hemisphaerica|type=gene|length=3973bp|location=Sequence derived from alignment at scaffold_288:368643..372615- (Clytia hemisphaerica)
GTTAGTACCTACTCCCCCAATGAAATCAATTTGCATTTATTCTATATACT
GAATAATCGGACATCGGATTCGACGGAGGAGGTCTGTTGATAAAGTCAGT
TTCAATGCCTATATAAGGTCAATGTACAAGATTTATTGATTTTTTATTCT
AACTCATTACTTTAGATTGGTTAGTACCCACTCCCCCAATGAAAGGACTC
AATCAATTCATACTTTATTAATTCATCGTTTTCGTCCTTTCGTAATTTTT
TTTATTTATTCATCCAAGAAGATTTCTGTCTGAACTTCACTTCTAGAACA
TCGAGAACCATTGCTAAGGTATGTAGGGTATTTTTATTAATGAATTCTTT
GAGTTTTGTTAACTACTCATAAATATTTTTGACAACGATTGAATTTAGTG
GTTTCTTTGTTTTCGAGTGGTATATTTTTTAAGGCCTCTGTTACTTTATT
TTTCTTTTTTGGACCTACCCCGGTGGGGTGAAGGTCCTATAAATTAACCC
GTGTTCGTTAGTTAGTTAGTTAGTTAGTTCGTTCGTTCGTTAGTTACCAA
CTTTTCTCGAGATTGGCTCATTNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCATAGATGCACATTAATACT
GCCGAAAAGGTGTCGAAAACTGTTTGCCGAAAAAAAAATTTTTCCGGTCT
GTAGAACCGGAAATGTGCCGGAAATCGTCGTTTTTTCACATTTCCGTCAC
ATTTTTTCAACTTATTTAATTGTTTCNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNACTCATTACATTAGATTG
GTTAGTACCCACTCCCCCAATGAAAGGACCCAATCAATTCATACTTTATT
AATTCATCGTTTTCGTCCTTTCGTAATTTTTTTTATTTATTCATCCAAGA
AGATTTCTGTCTGAACTTCACTTCTAGAACATCGAGAACCATTGCTAAGG
TATGTAGGGTATTTTTATTAATGACTTCTTTGAGTTTTGTTAACTACTCA
TAAATATTTTTGACAACGATTGAATTTAGTGGTTTCTTTGTTTTCGAGTG
GTATATTTTTTAAGGCCTCTGTTACTTTATTTTTCTTTTTTTATGTTATA
TTGTGCTCTCTTTAAAATTAAGAGGTTAATATTTTCTTGACTGATATTGA
GAAATTGCTTTTTTGTTTTCTCTAGAGATACCCTTCACAACAAAACTTTA
AAGATAATCAAAGATGACATTTTGTAAATTTCTTCTACTCGTGTTGAAAT
TTCCTTTGATTTTCGGTAAATATGAAACCCCTGATATGCCGTTCCTCCCC
TTCAAAATGGAAAGTCAAAACACGGCCATTTCCGGACCTTCACCGTGGTT
GATTCAAGAATTCACTTCCAAACACAAATGCTTCAAAACTTGTCTTCAAA
ACTTCACGCTTTGTGGGCATGTTCAATATAAAGAGATTTCTGCTAATCGT
TGGTTTTGTCAACTTTATGACGTCATTGAAAACCTGTTCGATTACTTGGT
GTCACAGATAGGTGAGACTTTGTATTCAGCGCAACACCAAGACCTTGACT
GCAGCGATTGGAAGGACAGAGGGTACACAATACCAGGAACTTATTGGATC
TTTCGCAACAGAACAAAGATGAGAACAGTTTGCAATACAGGAAATCCACC
TTGGACCCTCATCCAAAAGCGAACGAGTGCGTACGACTTCAACCGCTCGT
GGGAAGAATACAAAAATGGGTTTGGAGATCCGGAAACTAATTTTTGGATC
GGGAACGACAAAATCCACAAGTTGACGTACGGTCGAGAGATGCAAATCCG
TTTCACTGGTGAGCCCTATAGTAAGCCCAAGAAATTTTGCATTTACACCG
GTTTCTATATTGAGGGCGAAGAAAATAAATACCGCCTGCATACGGGTGCT
CATACAGGCGGTAGTGATACTTACGCCGGTGATTGGGCTCTTCACAATGG
TTCTCTTTTTTCGGTGCGCTCTCAAGATAATGATGGTTGGGCAAACCATA
ATTGTGCTGTTAGGTTCAAGTTAAATGGTTGGTGGCTGGGTATAGTAGAG
GATGGAACTCCTTACTGTGCTGAACTTGCATTCAATGGTGATTGGGACGG
ACAGAGCCCCGATACTGGACCCTTTTGGAAGTCTTTAGACGGATATAAGT
CCTTGAAGGCTACAACAATGGAAATTCGATTCAAAGAACTTTAACATGTT
CTTCCAATTGATAAATTGAGTAATTGGGCGAGACAAATTTAATTTTTTAA
TTTATTGTTCTACGGGAAAACCTTCAGAAAAATATTGGTTGGTCGGTATA
ATAGAAATAAGTTTTTCAAAATCTAGGTTTGGTAGGTCAAGTTCTAAAAC
TCTAGACTTTTCTTCTTACTCGATGAGTGGACTTTCGTGCTTTTCCATTG
TTCAAATTTCAATTCATCCAATTTCTGGGATGAATTTACACTTTTTCAAC
CTGTTCAGTTAAAAAAACTGCAAAAAACTTGTAAAGTCCATCCTTCAGCT
TTGCAAATTAATTATTATTATTTTTCTCGATATTTGAAAAAAAAACAGGG
TCGGTCGGGCCCGTAGAACAATGATTTATTTTGGCTCCGTATAAGATACT
TAGAAGTTTCATGCCATAATAAATGATGACGTTATTTAAAGGTTTTATTT
TTACATAAGTGTTCCCGTTTCATATCAGACACATATTTCATATCAGGACA
GTGACTGATTGTTATAATATGCTGATATAAGCGATAAATATTTTTCTTTT
CCCCTTTCTGACCAATCTTGCTCCGCACCCGTGTCAATCCAATGTGAAAA
AGCTTGTGAATTAAAATTGATGAATAAGCAAACGATATATAGATAGGCGC
TGTGATATAGTGGTCATTGACCTTGGTTGCTGCACGGGCGACTGAGGTTC
GATTCCCACTCGCAGCGGTTCACTTGCCGAATGAATGAACCTTCAACCCA
TGCCATGTGAGGGGAATTGGGTAGTCAGTCCAAGGGGCTGACGGGGCGCT
CATTGAAAGCGTCTATAGTTGCGAAAATAGGCCTCAAAGCCTCCTGCAAC
TCAACCAAATTGACAATAGAAATATCACTGTTATTTAAGCCACGATAAAC
TTTCAATATTCATAAATGAAAAGGTGTTGTGACGAGTGTGGGTATTTTGT
TGAGGTAGAAGGAAACAAACAAAAACCTCATGTTGAGAAAAGACTCTAAA
ATAATAATGAACATGGAATATATTAATTAAAAAAAAAACTTGCACCAAAT
TTTACTGAGCACTTTTAGACTAAATTCTGCGTATTGTAACCTTTTATTTA
TTATCCACGATTTTTAATTCTTAGATTAATTTAAACTATCCAGGAATATA
ATAATTTTGATCTTATTCGAAATATCTTAACAGTTTCACGGTTTGAACTA
CCTTATTGGGGGAAAAATGTTGTTGAGTTATGAGTTATTTAGTCGGGTTT
TTTTTCGTCGGGGAAAAATTTCGTCACCTAGAGGCATTTTCGTCACTTTC
CCCCGACCAAAATTTCAAATTCG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00057359TCONS_00057359Clytia hemisphaericatranscript
TCONS_00057358TCONS_00057358Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00057358-proteinTCONS_00057358-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_288supercontigscaffold_288:368643..372615 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.38	0.36	0.7	0.57	0.49	0.52	0.49	0.46	0.32	0.47	0.67	0.47	21.81	27.22	19.15	12.4	1.93	2.12	17.89	14.57	5.49	5	2.84	3.58	5.31	6.47	9.79	8.97	2.77	1.76