XLOC_036216 (gene) - C. hemisphaerica

Overview
NameXLOC_036216
Unique NameXLOC_036216
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_289:37883..43365-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_036216 ID=XLOC_036216|Name=XLOC_036216|organism=Clytia hemisphaerica|type=gene|length=5483bp|location=Sequence derived from alignment at scaffold_289:37883..43365- (Clytia hemisphaerica)
CCAAGTTCGACGTCCGCCACTTCAACCAGTATTTAAAAAAGTTCAAAACT CACCACTTGCTGTTTGGTTTTCGATCTACAGGTGAATTAGAATTACACCA TCCAGTATACAAGTTCTTTCTGGGTGCTTTCTTTAACCATTCCACAAGCA CCACTGGATTTACAAAAACATCATCATCCGTTTTCAAAACATAAGACGTT TTACATTCATAAAAAGCCCATTTCAAACCAAGTTTTGTTTTCATGGTTAA ATTTCGGTAATTTTCCATCATATTACCGAAAACAATATCTTTACTCAGTC GAGATTCCTCCTTCAAAGATGAACTCAAATTTTCATCTTCCACGTTCGGT TGTCCAATAACAAAAATTACACGAACAACATCTGAAGTGGAGTAGGTTTT CCCATTGGGAAAAGGATGTTTCCCTTTCAATTTTTGAAAATCATCTTCGT AACTGTGAGCCCAAGTATCTCTAATGTTCCTACGTCGTTGAAAATTCTCA GGTTTGCTGATCACCAAAACGGTTAAAAAGATTTCTTTTTCACAATAAGT AGATTCCGGTAAAGGATCAGTCTCCTGTTCAAAATCGATACCTTTTTTGG TCAATTTCTGAAGATTATCAGGATCAGGATTTCGGACTCCAAACCGACGA CTCAACTCACGCGTAAAACTTAACTCATCATCTGGCGTATCTTTGGTAAC TACGTAACCAGCGCCATATTGTCTCTGGGCATTCAAGCCTTCAGGATATT TCGTTCGCAATTTATATATGGTGAATAGTAAGATTGCTGCTATGAAGAGC AAAAATATTTTTTTCATTGCATCATAACGTTACTTTTTAGTTCATACTAA ATACGAAATGAAATAGTGGCATGATGGAAAAAATTACCTTGTTTTGAAGG AATCTCGATCGTTCACTCACCTTAGAGGCCTTTGACAAAGCAAAAACATT TCACCAGTCAAGATTATTTTTATCTCTATTTTCTGAAAAAGAAAAAAAGC ATATCAATTTTTAAAAGTTGGGGTTTATTGACAGTTGGAGAGAAAATGAA CAAAAAATGATGTATTATACTACTTCATCCGACCTACAATCAAGGTCGAA ATATATTTAGATGTGTATTTTATAAGTGTTTTTTAACATTTATCAGAATG TAAAGTTTGGGCGAGAATTGCTATTTTTGCACTTCCACTTTCTTTCATTG AATATTTCGATTTTGGAGGGGTTCGGTGGCTTCTAGGCTATATTCCAAGC CTTATTGGAGCAAATTTGAGTTTTCAGATCCTGAGATCCTAAGGTCCTAG TCTCATGTTGAAACTCATAGTTAAAACTCTACTTTCCAACTGTAGTTTAA AGCGCTTAAAATCATTTGTGGTGTTTAAAATTTCGCAGGGAAATCCCCTT TGTCTTAAATATTTTCCATGATTGTAGGTTTACAGCATCATGTCAATCAG AGGGAATCGGAATTTCAAAATTAAATACAGGAATGTTTTCAAACAAATAT CTGTCGAGAAAAGTGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTGGCACTTCCACT TTCTTTCATTGAATATTTCGATTTTGGAGGGGTTCGGTGGCTTCTAGGCT ATATTCCAAGCCTTATTGGAGCAAATTTGAGTTTTCAGATCCTGAGATCC TAAGGTCATAGTCTCATGTTGAAACTCATAGTTAAAACTCTACTTTCCAA CTGTAGTTTAAAGCGCTTAAAATCATTTGTGGTGTTTAAAATTCCGCAGG GAAATCCCCTTTGTCTTAAATATTTTCCATGATTGTAGGTTTACAGCATC ATGTCAATCAGAGGGAATCGGAATTTCAAAATTAAATACAGGAATGTATT CAAACAAATATCTGTCGAGAAAAGTGTATGACACAATAAAGTTTCTTCTG TAAATTCTCACATAAATATCTATGATATCTTGATAAATAATCTTTCATAA CAATTTCGTGGTTATTTGGTTCTAAAAATTTGGTAAAAATTCGAAAATTG GATACTTTGATTTATACTAATAAAGCTATAATATATATATGTAAATATAC TAAATCTCCACAACATGTTGTTTCGTTTATATAAATTTTATACATATTAT AATGTCTTGGGTTGGGTAAAATTCTTTTTCAAAAGACCAAAAAAACAATA GTTGGCAATAAGACACACAAAAAGCAAAGCTGAAAAAAGATAAAGCATTT GACATCGCATTCAAACAAAAAAAAACAGGTACATAAAAACAGCATACAAA TAATATAAAAAGTATGTCCGAAATCGAAAAATAAGTCAAAAACATAAAAA ACATACGGTAAAAACTTAAAAAAACATTAAAAGATAATTAAAAAACCTTA AAATTACAAAAAATAACCAACTCCTAAGTCCCCATTACTGTTCAACGCAA GCGGAAGATCTGCATCAAAGTAAATTTTGGGATTTCACTGATTGAATACA TCTATAGAGCTATGGAAAAAAGGTCTTTCAATATATTTGTAATATATAGC AAAATCAGGGAGAAAACTGAAATAATAATACTATAATCAACAATTCTCTA GCGCATTTCTAGATTGATTGATGTGTTTGACAAGGTTTTGACCAAGTACC CTATGCAACAAAAATATAGAGTTCAAATCACAACTATTTTCAGTCTTCCC ATTATAAACAAGATTGAAATGTTTCCTTTCGTCTCTCGGTTGAACTCCAT CTAACTCTCTGATCATCAAACCAACGTATAAATCTTCCATAGGAAACAAA AAACGACCGTAAGATAGTTTGATTACAGATGCTAACACATCAGAGGAAAT AAGATAGCCCCCGCCGAGACAATATCCAGGGTACTTCTCTTCCTTGTAAT CTTCATATGAAATATACCTGAAAGTGAGAAGAAATATCATAACGATTAGG AAGATTAAAGACAACAATTTTAATGATAAACAAAAGCAAGCGCACAACTT ATGCTGACTAAACAGGTTTTCCAATTTTGTTCACCCGGAGGAAGTCGTTC TTCTTTTGTTTTAAAATGCCGTGCAAGAAATGCACGATGCTACATAAGTT ATAAGCAAGTTATATTACGTAATGACTTTCGATTTTCAATTTGTAACTCA GAACCTAATTCGAGAAGAATTCAGTCGAAAAAGGCCATAATGAGGTATTT TCAACTTGAAAGGATTTTATATTCAAATTCTAATATTCTTGAAAGCATTC TAAAACAGAGAGCCAACCTTTCTCTCAGTGAGTGAGCTAGTGAGCGAAAA CAATAAAAAAGTGAATAAGAAGAAACATCATACCACTTATTGCGCTTATC CCTTACAACAGGTGAATTNAATACTATAATCAACAATTCTCTAGCGCATT TCTAGATTGATTGATGTGTTTGACAAGGTTTTGACCAAGTACCCTATGCA ACAAAAATATAGAGTTCAAATCACAACTATTTTCAGTCTTCCCATTATAA ACAAGATTGAAATGTTTCCTTTCGTCTCTCGGTTGAACTCCATCTAACTC TCTGATCATCAAACCAACGTATAAATCTTCCATAGGAAACAAAAAACGAC CGTAAGATAGTTTGATTACAGATGCTAACACATCAGAGGAAATAAGATAG CCCCCGCCGAGACAATATCCAGGGTACTTCTCTTCCTTGTAATCTTCATA TGAAATATACCTGAAAGTGAGAAGAAATATCATAACGATTAGGAAGATTA AAGACAATAATTTTAGTGATAAACAAAAGCAAGCGCACAACTTATGCTGA CTAAACAGGTTTTCCGATTGTGTTCACCCGGAGGAAGTCGTTCTTCTTTT GTTTTAAAATGCCGTGCAAGAAATAAGCAAGTTATATTACGGTAATGACT TTCGATTTTCAAATTGTAACTCAGAACCTAATTCGAGAAGAATTTCGTCG AAAAAGGCCATAATGAGCTAATGAGGTATTTTCAACTTGAAAGGATTTTA TATTCTAATTCTAATATTCTTGAAAGCATTCTAAAACAGAGAGCCAACCT TTCTCTTAGTGAGTGAGCTAGTGAGCGAAAACAATAAAAAAGTGAATAAG AAGAAACATCATACCACTTATTGCGCTTATCCCTTACAACAGGTGAATTG AAGTTACACCATCCAGTATACAAGTTCGTTTTCGGGATCTCTTTCAACCA TTCCACCAGCACCACTGGATTTACAAAAACATCATCATCCGTTTTCAAAA CATAAGACGTTTTACATTCATAAAAAGCCCATTTCAAACCAAGTTTTGTT TTCGTGGTTAAATTTCGGTAATTCTCCATCATACTACCAAAAACAATATC TTTGTTCATTCGAGATTCTTCTTTGACTGATTGCATTACTTTGGTATCAG TTTGCGCTGACTGACCCACAACGAAAACTACACGTACAACATCTGAAGTG GAATAGGTTTTCCCATTAGGGAAAGGCTGTTTCCCTTTGAGCTTTCTAAA ATCCTCTTGGTAGCTTCGAGCCCAGGTGTCACGAATAAACCTCCGCCGTT CGACACTCTTAGGTTGACTAATCACCAAAATGGTCAAAAAGACTTCTTTT TCACAATAAGTAGATTCCGCTAAAGGATCAGTCTCCCGTTCAAAATCGAT ACCTTTTTTGGTCAATTTCTGGAGATCATCAGGATCAGGATCCCGAACTC GAAACCGACGACTTAACTCACGCGTAAAATTTCCTTCACTCTCATCCGTT ACCAAGTCATTGTCTCTCTTAGTAGCTTCAGTAATCGGTTCTGGATTTAG AGATTCCTCCTTATCGTGAGCATCTCGTTGCCTGTGAACTTCAGCATCAT CTCCCACCATGGATATATGAGTAGCCGGTAATTTGACACGTTTTAGAGCA CCTGGTATAGGGCGTTCTTCAAAATCATCAACATCGATACCAAAGCTTTC CAGCTCCTTCAATTCCTCTTCCATGGCATCCAATATGGCTTGTTCACTAC TCAAATGTAGATCTGTGAACCTTTCCATCATTTTTTTATTATTAATAGAG GCCATGTGTGCATATAAACGCTTTCTATACCAAAACCGATCATGTTTAAT TACTTTTTGACGTGCAATTTTTGGAGAAGAGAAAAATGTAACCTCCACCA CATAGAGAAAGACAATCAAAGAAATAACACCAATAACAAATTGTTGTCTC ATGATCAATTTGTCAGCGTCTGTGGTGGTACTGATATTTTCTGCCTTATT TCATTTTTTTTGTTTATGTTTATTTTTTTATCT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00057469TCONS_00057469Clytia hemisphaericatranscript
TCONS_00057468TCONS_00057468Clytia hemisphaericatranscript
TCONS_00057467TCONS_00057467Clytia hemisphaericatranscript
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_289supercontigscaffold_289:37883..43365 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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min expression (4.15 tpm) - - (12.56 tpm) max expressionaGrOo_1GrOo_2FGOo_1FGOo_2EG_1EG_2P1_1P1_2P2_1P2_2P3_1P3_2PoPr_1PoPr_2St_1St_2GO_1GO_2PH_1PH_2BMF_1BMF_2MMF_1MMF_2M_1M_2GEC_1GEC_2GEN_1GEN_2
Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
5.61 4.66 7.87 9.89 10.83 9.06 11.66 11.1 7.93 6.82 9.93 6.1 4.27 4.9 6.35 5.97 8.57 11.39 4.15 5.56 8.51 8.31 12.56 11.68 6.48 7.73 6.27 4.47 10.07 12.11