XLOC_036301 (gene) - C. hemisphaerica

Overview
NameXLOC_036301
Unique NameXLOC_036301
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_293:259339..269360+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_036301 ID=XLOC_036301|Name=XLOC_036301|organism=Clytia hemisphaerica|type=gene|length=10022bp|location=Sequence derived from alignment at scaffold_293:259339..269360+ (Clytia hemisphaerica)
NNGATTGATTTCATTCCCAAAGTCTGTTAAGACATTCGATGCGTATCACC
GAATTGCCGATTTCACTGAAGCGCGATTTCATCTAACGGTAAGTGCAAAT
TTTGTTATATTTCGGTATTTGtgaatcttttaaaatttagagTTCTATTA
TGTTCGCTTTGCCACGTGGTGTCGTTCTCTACGGATTCTCTTTTTTATAG
ATTCGATGACGACATTTGATGGATGTTCTGGTACTGATGTTTGGTTCTGA
AGTTCAGGTAACTTTTAATACTTCACCAAAGTTGAAGTTTTTCTGTAGTA
TATTCGGTATGTTGACTTCCATGATAGAAATTGCTTGAGTGTTTGACGCA
ATTACTCTTTCGGATCTTGCTTCGATTGTGGTGATGCCCGTTGAGTACTT
GGTAGAATTCATATCGATGGTCTTCAAATTGCTGCATGCCATAGCTGAGG
TCTCCTTTGTGACTGTCGTAGTTGGAGTCTCGTTTGTGGTCGTCATGGCT
ATTCGCATTGTCATGGCTGCTACAGTTACGAGCCATAGTGATAATAGTCC
CATCATTAGCTTCTTGATTGACTTGTTATATACGAATGGACCTTTAACGA
ACAACTTGGGATGCTTGAACTTTGAAGGGTTCACCCGTGCCATTCCTTTC
TTCGTCTGGATGTTCTCATTCGGCAGGTTCACAACTGCTTTGATTCTCTT
CAAGAAATCTAGACCAAGCACTAGGTTGAATTTCACGTTGCTTGACACAT
ACACTTCATGGAGCCAACTTTGACTTTCTATGGCCAGTGGGAGGATAGTC
GACCCTACTATCTCCACTGTGGATTCAGTTATTGACTTCACTGTACCAAA
GTCTCTCGTGTCATCTGTCATCATGAATGGTTTCACGTTGCATTGGTTCC
ACATTTCCTTTTTGATGAAGGATATAGGGCTGCCGGTATCGATTAAAGCT
TCTAGTTTGATTGGCATGTTCCCCAACAATGCTGTTGCCGTCACCAACAT
TCCGTCATTTGTGCTTCCATTGATGATGTGCTTTACTGCCGAAACATGGT
TTGCTGAATTTTCTTCCTGTTTTCGCCTGTTGCCTCTTCTGGATTTCAGA
CTTCGAGGTGGAAGCTCTGGTGGCTGATCTTTTGGAATTTGctttgattg
ttttttctttttcttcctttCCGTAGCATTCTGGCTCGTTCCTGGCATAC
TTGATATGTATCTCTCGACTTCTTTTCGAACATACTCTTGGATTATTCCC
ATTAGTACCAAATCCGATTTGATGTCGTGATTTGCGGGGGTAGTTATGTT
CGACATTTCAACATTATTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNAAGAAGAGTAGGATGAGTCCCAC
GACGATTATGAGTCCCATCATGACCCATTTGTTGAAGATTTTGGCAATGC
CTTCAGCAGCACTGTCAATTAATTCGCTTTCTGCGTCTCCGACTGCATGA
ATTAGTTCACTTTTCGCTTCGCCCACAGCCTTTACAGTGTCTGTTAATCC
CTTACCGAGGGCAGATATGACTTGGCTGGGAGATTCTGATAGGAAGTTTC
CAAGTCCGTACGTGATAGCTGTTAAGATGTCTGGCTTGTGGGGTGTTTCT
TGATTTGCTTTCATCCTTGCCACTTCTTCTGTGATTTCCGCTAATTCACT
GACGGCTCCGTAGACTCGAGACATGATTTCGGATATGGTTACTGGTGGAA
GATGGAACTTTTCTTCTAGTATGATATTCTCGTGATTCCCTATGATGTCT
TGGATGACATCTTGTGACTGAAAATCCTCCAGAGATTTCAATAGGGATTG
TGTCTTTCGGATTGTGCCATTTCTGCTTATTCTGAAGGAGGATTGTTCGT
TATCCACCACGAATAGAGCATCGCGTCTCGCGCATGGGATTGTTGGGCTT
TCATTCACCACTTGCCTTGTCGAGAGCACCAAGAATTCTGAGAATGGCAA
ATTCTGAGAATGTGTGCCATTAAAACTGTCCTTCTGTTCTTCAGTTCCAT
TCCCATTCGAGATTCTGCGGATGGGAAAATGTAAGTAACAAGTGTTATTA
TACTGTCTTGACCACCAGATTTCGACTGCTTCCTTGATTTTCATACACTC
TTTCAACATGATTGCGTCTCCCATTGGTTTAACAATGACGTTTTGACCAC
TACGGATCCATTCATTTGCTGCAGAGGGGAAATGATTAGTTATCCAATGG
TAAAGTTTGTTTTGACCAGCTTGAAGATTGCATGTTCTTCGNATTTCCTT
ACTTTAGTTAGCGAATGTATCTTCGTTTCAGGTGGCAATTCTTTCGATGT
CACCACAAAACCATTGTCAATTTGGATGATGTATGGTTCCAGTAGGTGCT
TTATGGAGAAATGTTCACTTTTATAGAACGTCTTCTGTGCAAGTTTGTCT
TCTCTCCACTCGTATGCTGCTGAAACGTGTCCGGCCAGTCCTAGCTCAGG
AATCGATATGAAGTTTTCTGCTTGTAGAACAGGTAATACTTTCATCAATT
GAAAATCGTGATTATCATGCTTGAGCTGATAGTAGAGAATAAGTGTTGTT
GTGTCTTTCGTATTGTTATATACTGGTGTACAATAAGCTGCTGGCATTGG
CGGAACATACTTGATACCAGTGTTTTTGGGTTCTTTTCCGGCCTCTAGCT
TTATTATAGTTTCAAAGTCTGATTCAGTGTTCATGTTTTCACAACTCGTG
TTTGCAAAATAACTCATTTGTAATTTCGAGTCACTGCCCGTGATGTACGC
tgtttgaatttcaaattcgtAGAAATAGTGCCACAATATCTTGCCAACGG
GACAAGTGTCAGGATACCATATACCTTTATCGTCTTTCCTCCTGACCACC
GGAGGAATAAGTGTGCGCACTCTGTATGTCGAGCCATAACTTTGAAATTT
ATACGGGAAAGACATATTCACATTGTTTGTATCTTCGAAGATTGCTTGCC
GGATTCATTGGTCGCACTGTATTGGATTCACTGGTAGATACGTGCTACTT
TTTCAGTTTCTGGCGTTTCCATTCTTCACTCTTGACTTTTcgttgcaatt
tttctttacttcGATTGCCCTGCATATGTAAGTGAAGAAGTGAGTGGTCT
TGGGTTGGAACTTGAATATCTTGTGGTTCTTCACGTTCACTTCAGTGGCG
TCGTTATTCAGGTTGTCACAGGAGTCGATTGTTTGAGGTGCATATACTTC
TAATATTTTGCTTTGTTTGCAGTCGAACAACTTCAGTTTCGGTGAAACAT
CTTCGGTGCTATTGTTCGTAGCTGTTTCATTGTGATTGTTCTTTATTGTC
GTTTCGTTTGTAATGTTTGTTTCGGCATTCACGACAGCAATGCCAAAAGT
GATGAAGATTAAAAACTTCTgcattcttgttttaatcttttttcaatgtt
tGTGCCTTCTGCATAAGTTTCTCTTATGAAGAATTCGTTTGTAcaatttt
ctcttctttttcatttcaggaTGGCTGCCATTCAAATGCATGTGAATAGA
TGCAACATCCCGTCATTCATATTATCATTAACAATTTACGATTGATGGTg
ttttccatataaggtaattgaattcattttgttttaaagttttttcagtA
TTGTTCAATTATCTCTTTAGGAATATTCTCTTCAggtttccaagaatttt
cttctttttcgtaGTTTAGCCATTTCACCAGGAATTTGgtcccttttttg
tttcttttatgtttGATCAATTTCTCCACCAAGTAGTAGTCTTCTGGTAG
TTGTTCCTCATGATCGTGTTGAATTTCGGCTTCTCTTGCTGTTTCTATGT
CATTTTCTGATTCTAGGAGTTTGTCGCTTGCCACTTCATTTTGGGTTTGT
CTCGTCTTTGTGTTTTGCTCTTCCTCCAGCTTCTTTCAAGGCTTCATGCG
GTCGTAGTGAACACGAGCTGGAGtgtctttttctctcttttttactTGAT
ACAGGGGATGATTCTCTTTGAAAACTGTGTACGGACCTTCCCATTTTGGA
GCTAGCTTTCTTGACAAGTTTTTGGTTCTCCTCTGTATTGTGATGTACAC
TTCATCTCCAATACTGTGTCTATTGGCATTCTTTACTGATCGCAAGCGTG
AATATTCCTTGCTGTTCGCTAAGTTTGTTTTCACTTGCTGAtgcaaatct
ttcagtttattctTGAGGTGATGCAGGTATTGGTTGGGAGTTTGGTGGTT
CTCCACATCTCTCGTAATAGGTAACTCGGTTGGTTGGTGAGCGATCCTTC
CAAAGAGAATTTCAAATGGCGAAACTTTCCTTGTTTTGTTGACGGAGGAT
CGATACGCAAACAACACCAGTGGAAGTCTTACATTTCAATTTCTTTGGTT
CGTATCTATCAGCGTAGATAATGAATCTGCGATCACTTTGTTGAATCTTT
CGACTTGACCATTAGATTTCGGTGAGTATGGTGCTGTCTGTAGTTTCTTT
ATTCCGAGTAATCTGCAAACTTCTTTCATTAGGTTGCTGACAAAGTTTGT
TCCACAGTCCGACAAGATTGTTGTCGGAGTTGAAAATCTTGCGATGACTT
CGTTGACCAGAAGTGATGCGATTATGGGGGTTTCAGTAGTTGGCACTGCA
AAACACTCGGGCCATCCACTAAAACGATCAANTGAAAATCTTGCGATGAC
TTCGTTGACCAGAAGTGATGCGATTATGGGGGTTTCAGTAGTTGGCACTG
CAAAACACTCGGGCCATTCACTAAAACGATCAACGAATGAGACAATGTAT
CTGTTACCAGCGTGCGTTTTCACGTAAGGTTCAAGGACGTCACAGGAGAT
GTCTCTTCAGGGTGCTGTAGCTTTCAGAGGGTACAATTCAGatattttct
ttcttccttTGTAGATCGCACATTTCTCACATTTCTTGACCTTCTTGATT
ATGCCTTTCAACATTTCTGGTCAATAGTAAGCTGCTTTCAGCTTCTGGTA
TACGATTTCTGAATTCAGATGTTCTGCAAATGGGGTAGCGTGAGCTTCAT
GTATTAACTGGTCGCGATTGCTCTTTGGAACACATAGTCGTCTTTCTGCT
TGGCCATTTCGATTGGTTATTTTGTGCAGGAAACCATTGTCATTCAAGAA
TAATTTGTCATTGCTTTCGCGATTCTTGAATTCTTCCTCCTCCTCCAATT
GCTTCAACCAATCTTCTGCTTCAGCATCTTCAGTAACTCTCAAGATCACG
TTGACTGCTTGGGGTAATCTTGATACTTCATCTGCATCTCTGTTCTTCAA
CCCTGGCTTGTAATGATTTGGAAGCTGAATTGTTGAAGATACAGGTACCA
TCTAGCCAGTTTCGATGTTAAGTTCTTTACATTGAAGAGGTGAACCAATG
CTTGGTGGTCGGTGTGAACAGTAAATTTGTTACCTTTCAGGACGAAATAG
TGTGTTTTGATTGCATGCAACATTGCTAAGCATTTCTTTTCGGTGACCGT
GTAGTTGCATTCTGCCTTGTTTAATTTTCTACCACCATAGAAAATTGGGT
GTTTCTTTTCATCTTGGCCAATCTGTGTAAGCACGTGGCCGATTGCTGTA
CCTGACGCGTCTGTGTTCAGGTTGAATTCCTTGGTGAAGTCTGGATAGGC
CAAAAGTGGAGGATGTAGGAGTGTTACGATCAGCATCTCATACCTATCTT
GAAGGTCTGTGCTTCATTGGAATTGTACATCTTGTCGCAACATATCATAC
ATCGGCTTTGTTATCTTGGAATGATCTTTGATGAATCGTCGATAATACGC
GATGAGTCCTAGTATGGATTGCAACTCTTTTTTGTTTGAGGGAGGCGTCT
TGTTTTGCAATGGCACCAGGTTGGTTGGCGCAGGCAAAATTCCTTCTCTG
CATACTATGTGACCAAGGAATTTCAGcgaatctttttcaaaatgacatTT
GGAGCTTTTGGCTGTCAAACCTGCGTTTTGTAAAAGCTCGAAGACTTCTC
GCAAGTGCCCAAGATGCTTCTCAAATGTTTTACTGAAAACCACAATATCA
TCAATAAATATGAGAACGCAACGTTCTCTGATCTTTTTCAGCACATTCTT
CAGCAGCTTCTCGAACGTACCCGATGCTTCTTGCAAATCAAATGGCATTC
TCACATATTCGAAAAGGCCAACGTGACAGCTGAAGGCGGTTAACGGTATG
GacgattttttcattttcacttgaTGAAATTCAGACATCAGATTCATTGT
CGAGAAGAACTTTACTTCATGCAAGGCTGCTAAAATATCGGACGTGTTCG
GGATAGGATAAGCGAATTTCTTGGATGCTGCATTGATCTTTCGATAGTCA
ACACACATTCTTCAACCTTCTTCGGCTTTTTCAACCAAAACAATTGGGCT
GCTGAATTCTGAATTGCTTTTCCGTATGATGCCTTTACGCAGCAAATTCT
GAACTTGATTCTCGatctcttttcttttgaagGGTTCAACACGGTATGGT
TGTTGTCGGATGGGAGTTGGGTTCAATAATTCTATCTTGTGCTCGATTCT
GTCTGTTGAGCCAAGTGGCTGCGAAGAATCTGGAAATAAGCCACTGAATT
TCTCGACGAGGTCTGTGATCTGCTTCTCTTGAACGTCGGTTAAGCAGCTT
GACTTTGGTATCAAGGTTGGCTTGATTTCATTGTGCGGTGGTAAACTGGT
ATCGCTGTTGTCTTCTTCTGCATACCCAACTGGTGCGGAGGCTTTGAATT
CAATCTTTTCATCTGAAACATTTGTAATTACAAAGATAGCGTTATTGGCT
GACACCGGATTCTTCCCCATGGAAGTAAACACTTTTATGCTAATTTTCTT
AGCAAGAGTTGTCAAGTTGCTTTTGTGGGATTCATTAAAGTCTGCATGGA
ATTGCTTGCTTTCCCCCGGTAAAATGTGCAACATTTCATCGTTTGTTTCA
TGGGAAACAATGTCGAAATTTATTTCTTTCGTATGTCCTTGCGCGTTAAT
AGTTAGTTTGCGCTGATGGAAGTTTACCGTAATGTCGTGATCGCTCAAGA
AATCAATGCCCAATATTGCTTCAGTAGCAATGTTTTCAAGGACCAGAAAC
TTGTGACTTATTAAAATGTTACGTTCGATTTCAAGTTTCAGGTTTATGAA
TTCTTTCGTAAGAAGTGTCGTGCCCGATGCACTCATCAAagtgattttcg
atttttcatcAATACTTCTTTTAAGTTTTTTCATCATATTAACACTGATG
ATAGAGACCAATGATTCACtgtcaattaaaaaatttatgtttaaaCTTTC
AACAGAAACTTCAAGCATTGGAAGGCCTAGTCACTTTGTAGTATCCTTCT
GGTGTTGATTCTTGgaccgacaaaattttgaaatgtgttCATTTTTTTCG
CACGTATGGCATGTGATATTTCTGTATCGTTTGGTGCGACATTCTGCCTC
TACATGTTCCTTTCTCTTGCAGAAGGTGCAAGTCTTGTCGTTGCTGCGGT
CTTTCGTTATTGAATTTAGCGATGATTTGACATTTTTGGTGATCTTCTTT
AGCTGTTCGATCTGTCTTGTCATTGCCACTGGATCGAAGTCATTGTTGTT
CATGACCTTGGAATGGGAAATACTTCTTTCATTGTTCATTAACAGCTGGC
GTACCATGTTCTTTAATTCGCCATTCTGCTGGTTCGGTCGTTCAAGTGCA
TTCTTGAGCTGAATGAAACGTACAGCATCGTTGTACGTTTTTGGCTGCTT
CATCTGAAGCCGGTAGGCGAGTTCTGGCCTAAGATTTGCGGTGAGAATGT
CTATCTTTGTGGTGTCAGGTGTTTCGAGCTCTTCAAACGATAGCTCGAGT
CTCTTCAAGAAACTTTCAAGATCTTCACTTTCCTGTCGCTGCGTGTATAG
GATAGCACGGTGCTTCGCAATATCTTCTGGCGAACAGAATTGATTTGTTA
TACGCTCTTTACATTGTTTGTAGTTCTTCTGGANNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNGGCAGATCAGCTATTCTGGTGCTGA
GGTGTGGACGATGGTCGATTGGTTGCGTTTGCTTCTGCCTTTGGTCAGCC
ATCATTTTCTCGAATGCTGCCACGAGTTCTTTCGATTCACTTTCAGTACC
GATTGGATTGACATGTCTTTCAACGTTCGGACTGTGTTTGCTTTCGGCAA
CTTGCTGGATTGAGTCAATCTTGTCACCGTCGTTCCCTCTTGGAAATAGA
TAATATTCATCTTCTTTGAGACCATTTAACTTGTTTTCTGTCTGGCTGCT
GTTCATAACTGTTTTTATGGTTATTGGTACTTTGAAAGCCTTCTTTCTGT
GATTCCTTTTTGAGGATGGATGTTGGAACGATATCTTTGTTGACTCAGGG
GTGTACAGCAAAGTTGAATTTTCAGCTGACGATTCTTCTATTGATAACGG
TGTGTTTGACTGTTCCTTTTCAGCTTCTTCGTCTTCTTCGATTGAAGATA
AGCTTGTTTTTGACTCGTTTTCTTCTTCTGCNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNTGGCACAGAGGTTAATCTTTTTCCTTTTCGAAACCACCTCT
TACTCATTTTTTAGATATCACTTCTTGTATGATTGAATGCTTGTTTGAAA
GCGTCTGTTTGTTTGAATCTGTCTATTTGTTTAGAAACAATTGCTTTCTT
ATCTAATCTGTGTTGAGataatttctttattatttATGTTTACCTCATCT
TGGGTATGATTTGGCTGATCTGTTTGTTTATCATTTGGCTTCTGTGCTGC
ATTGcttgtttctttgttttgggCTATTACTTCATTCTCTTTGAAGTTTA
gctttgcatttttcaaatctctTTCTGCATTAATTATAATTGTTTCATTT
GTGTTTGTTTCCATAGAAACGATAACTGGCTTCTCCTGAAGCTGTCTTCA
AGTTTTACATATAACTGATTCGCTGGGGGTTTTTTCTTGACCCCAGTTTC
CATGATATATTTTCTATCGATTTCAGCGGTAGCTAATTTGCCTGTACGTC
GTAATTGTACCTGGCTATTATTTTACCTTTTCCTTGGCTTCCGCTTTTAT
ACTGTATTGATAGCTCTGCTGTTAACTTTCTTTATAATGTTTATTCAGGT
GAACGTGAATATGAAGCAAAGACTCTCGAATATAGGGCCCTTCCGAAAGA
ATTTATTTCAATATCCTTGCCACCAGCGATCGCTCTCCGTCAAGGTGATC
TGCTGTCCTTTGCAAATCGAAAATGACGTACGTGTGAACTGTTTCGATAT
GGTATTGTCAATTACCGCATGCATTCGTGGTACCGAGACACCAGAGCACG
ACTTACCACCATCTACAGCCAGCACACTGTATTACTTTTATAAATAaact
gttattttttttttttcgatttgtcACGCgtgttttcatttttgtttata
GTTTTGTAAATATACTTTTCTGATATGTCAtatgtgttttcattttattt
attgtttCTGCTGCCATATTCTTCCGACGGCATCATATGTTTGTGTATTA
ACTTCACATAGCCAATTTTAAA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00057564TCONS_00057564Clytia hemisphaericatranscript
TCONS_00057565TCONS_00057565Clytia hemisphaericatranscript
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_293supercontigscaffold_293:259339..269360 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
2.73	1.86	3.75	3.02	19.81	13.37	20.04	22.37	23.97	9.67	68.74	106.3	96.78	69.43	67.66	171.81	64.85	64.46	5.29	4.65	52.44	45.29	42.08	35.23	19.29	39.05	17.45	6.25	2.09	1.46