XLOC_036371 (gene) - C. hemisphaerica

Overview
NameXLOC_036371
Unique NameXLOC_036371
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_297:22990..30535-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_036371 ID=XLOC_036371|Name=XLOC_036371|organism=Clytia hemisphaerica|type=gene|length=7546bp|location=Sequence derived from alignment at scaffold_297:22990..30535- (Clytia hemisphaerica)
TTTCCAGAAGCTGTACTTTTTGAATGGCTTTCATTCTAATTTTATCGAAA GTTACAACCTTTTTGGTTTCAGCTGCACCTTGTTGAGTTGAAGAACAACA ATGTTATGATAAACATTACATCATACTATCAATGATGGAAACAGTGGTTT TGTTTGCTAAGATTTACCAGGGAGTTTTAGATTTAGAGCTCTCTTGGCTA AGTTTCATTATTCAGAAACTGAGATGTGTTCTTTCTAAGTTACTTGCGTA GGAAATTAAATTTGTATTGTTTTGCCTTTTTTCAGAATATAATGAAATAA AACAGAATTAATTNTGCGTAGGAAATTAAATTTGTATTATTTCGCCTTTT TCAGAATATAATGAAATAAAACAGAATTATGGGTAGAAATACAATTGTTG AATATTACGGGGAAAGACCATTTCAAAAGTGTGGATATTGCAAAGGCAGA AAATGCAAGATTAATCATGGTACCCCTTATTTTTTTCATTTTTATTTTTT ATTCTTCATTTGGTAGACTAAAAAGAATTCAAAATTCCTATGATCCTCTC ATAAACCTGTCAAGCATGTTTTGTTTGTGGCTATGTGATTAAATCTTTAA ACATTAAAACCAAGAAATGTCTCATTTCAACAGTTAAACCTACGTCATTT TTAAAACAAATATTCATTTCAAATTCTATCAAAAGATCAACCGTTTTGAA AATAGTAAATAATTAATCTTAACAAATCTGAATGGGTAAAAAATTCAATT TTTAATTTTATCATTAATATTTACAACCTTTATTGAATCAGGGAACAAGG TTTCCTTTTTTGCAAAAAGATGATGAAATTTTATGGACAGTTTTTATCAT ACTGGGCTTGACACTCAAACCAGTATGGTTGTCCCTTCCCTCCCATCCTA TAAACCCTTTCCCTTCTCTCAGTTCAAATCAAAACAAAACAAAACAAAAT CCGAACATTCTCAATACTAAGTAAGAGAGTTACTGGACATGAATAAACAT TCCATAGTTGAGTTCTTTGGTCGTGAAGAGACTGGTCACCGGTGTGGATA TTGTAAATCAAAAGAAAGTAGCATTGCAGATGGTAAGTCTTCTAGAGATT AAGTAGAATTGTCGCCTGAAAACATGGTCTTAAACTAATGGATTTTTTTG TACTAAAATTACCTCATATATCGCATAGGATCTTACTTTCGTTTATAAAG CTTTTACTTATTCATCCCAAAAACTAAGGGGTTTTATGAGGAGGAACCAA CAACTGTATTTCCAGTGCATTGAATACTCAACACCTGATATGATTTTATT TCTTACTTCAGGAATGTGGGCACACTATTTGACATGTCAAGATTACCAAG ATCTTTTAGACAGGGGATGGAGAAGGTATGTATGTGTTTTGTCTCTTCTT TACTTAAATTTTAAGGACGACGATTTATTACATATACCTAAATGAATCAA AATTCAGAAATATTCAGCATATATTGTCTCCAATGTTTTACGTAAATAAT ACAGTTGATGCTCTCTAATTCGATCTTTAAGTGGAATTTGATTTTCATCG AATAAGGGAGCTTATCGAATAAGGGAGCATGGTTTATGGGAGTTTATTGT TGACGGTGACTTTCAATACTATCACATGATGGAACGTATGGAATAGTAAA ACCTCGAATTAGAGAGCGTCAACTGTATTATCCAACTCATGTAAAAATGG AGGTTTTTAATTTTTTTTTTACTTTAGGAGTGGGAAATATTGTTACAAGC CAATCATGGATAGAACATGTTGTCCCCAGTACACAATCAGGTGAGTTTAT CAAGTTTGTATACTAACTATTTAGATCTTTGCAAGAGGTCAGATGTGATT TTCTTATGATAAATACTAATGGCTAAAGGTATTTCACACCCTTAATGCTT TCGAAGCTTGTTAAAGTTAGAATATTAACTAATTTAGTGAGCTTCATTTG ATATGATTATTTAATTTTCATTTTTTTAAGACTTGATGTCACCAACGCCA AATTACGGAAATCTCAAAAGAAAGTCATCAAAAACTTCAACAAATACTTA ACCACTGGTATTTGTCCAAAGCAACCATCCAAAACAGATCAAAAAGCTTC TGGGGGAGGAGAAGTAGACGAGGATAACAATTGTATAGATGAACCTTGTG GTGGAGCAAGAGAAGTAAAAGCCCCTAAGATGGATATCAGTTTTACTGGT GGCATTGTGAATGGTTCGTTTCTTTTCTTTTTGGGCTCTTCCTTATAAGA TGAGATTATGAAAAAACACAATGAAATTGACATCCTTAAATAAGATAGTA AAACGTTCGAAAATGTCATAAAAAGAGAGCAAGACTGAATGAAATACGGC TTTTCTGGCTTTTCTGCTAATCGGTGAACGATAAACCATATATTCAACGT GAAAAATTGGATATCGAAAATAATTATTCAGTCTCGCTTATTCAACTCAG CTTCGCTTCGTCGAATATCCATCAAGCTCGACTGAATAATTATTTTCGAT ATCCAATTTTTCTTGTCGAATATCTGCTTAATATAATTATTTAAATAATA CATTTTTTTGGATTCTGATGGTATAAAGATCCTCCTAATAATACTTATTT TTTTCTCGAGGTGCTGACCCAAGTAAACCAAAATGTCGGAAAGCTAAAGA AGTGAGAAAAGAACGGAAACAGATGAAACAAAAGGTTAATACAGTAAACA GACTATTCAAAAGATTTCCATATCATTAAAGCACCGAAACTCTTATATTT CTGATGCAGATAGTCAGCTGGTTCAGGGTTTTTGATTTGATTCTGCTATG AAGCAGAAGCCCCCTTAAATGAGATTCAATAACAGGTTAATCACCCAAAC AGGTTACAGACTTTGAATTCCTTTCAGCTCTCTGTCTTCATTTTTTAGCC ACACGAACAAATAACAAGTAAACAAAACAAGAACAAAGAAAAAACATACG AAGAATGGATAGACGGTGTACCCGAAGATGCTAAAATAAAGTTTGAGGTA TAAACTCGATGCGGTAAAAGACTGATTTTAGTTCGCCCACCCTCACTTTA GGGCATCAAGAAGAATTTCAAGGGGTTTTTTTCACAAATTTTACGATTTT CCAAGGTATCTTTGACACAATGTCAAGAATATTTTTGCCTTGAAAATAGT TGACCACCCCCTGTATGGATATTAAAAAAGACAGGCTAGTTATTCAACCA TTTAAAATATTTTATTATAGTTAGACAAAAATACTTGGCAATTTTACTCA AAACCACAGAGGGTTTCTTCAGGCAAAAAATCTCAAACCATCTTTAATAT GAATAACAAATGCTATGTTTTCTCAGCTCTTCGTCTGAAGCATTAGGTAT CTAGAATTTTCATTTTTTTTGTTATTCTGGGAACAGCTATAAAGGCGTTG AAAAAGACCAAGAAAGGCTCTTTTTTATTATAAGGTTTTTATCATAGTTC AAAAGAAATGTTTTAAAGATATTTTGCCTTGCTTTTAGGTGAAATTAGTT CGTTGCTGTCCAGAAGATGAAGATTTTAAACAGACTTTTCGTCAAGAGTT GGAAGTCTATCAGAAATATCAAATTGAAATACATAAAGATGACCCTGACG AGGTCGATGAAAGACAGGTTGATTTTTCAATTTAATTCTTCAAATTCTTC AAATTCTTCAAATAGGAGCAAACCCCCATGAACAAAGACACGCGTTGCTA GTCCTTTGCTATCACTCAAAAACTGCTTACACTACACAATATATCGGTGA ATAATATTCGACAATATATATTTTCGGACCGTAATGTACGGAGTAAACAA CTCTATTATAAAAAAGAAATTTCAATTCTGTAACAGTTCCCATATATTGT TGGAATATTGCAAATCGAGCTTGCAAAATATTGTGAACACCTTTTCAATA TATTTTGAACACTTTACAATATATGGCCGGCACTCGCTGTGTAGTGTATT TTAGGATTCTTACTACCGTTCGAAAATAAAGACACCTGATTGTATTGAAC TTTTATTTCACCTTTAGGGTATAAATACCTTCCGCATGCAATATGATACG CTATTTATGTCATTCGTAAATTCAATTATATTGATTTGACAAATATGAAT TATAATGATTAATTAATGATTAATTAATTATATTTTTTGGTGTGTAATAT CTTGCTTTCTTTTTCTTTTATAGTTTCGGAGATTTTTATGTGAAGGTCCA CTCGTGGTGAGTTCTATGTTTGTATGTACCCACCTAATAGTAAACTGCAT TGATTTCTATCAGAATCATGCATGAGTGACTTGGTCTCGTGCAGTCTTTC ATGTAGTGATCTTCTTTTCACTTTTCAACACATTTAGATTCGAATTAAGT CAAATTGCTCTTACAAACGTGAATTTGTCTTTACAGTTTTTTTACATAAG TCTGAGAATGTGAACTAAAGACCCTTGATTGCAATTGATTGTATTCATGA TATGCATCATTACAATGTCTTCTGACATTACATCATTGACCCAATAGCTA ATTGACAGTTGTAAGTGACTTAAAACCAGGCAATACGTCACTTTCAACCA ATCAGCTGTTGGGTTCGTGGAAGACATTGTAATGGTGCATATCATGAATT GAATATTTACCTTTTTTTATCAAAAGCCAGTATACGGGGACGATGATGAA GATGAAGACTTGGACATCAATGGAATCCCTTCTTGTGGTTTAGGTGCTTT CCATCAACAATATTACCTCGATGGTATGAAATAGCTTTCCTTTTAGATCC AATAACATGTCTCGTTCGATACGCCATTTTGTTTCTTTCACTTGCTACAA TAGTCTTTTCCATGAAAAAATTGAATATGGGGGGTGAAGGATATATTGGA TATTTTGTCCGGGGGTAGTGAAAATCTGCAAAATTTGCTTTTCCTCTGGT ACAATTGTTACATTAGAGAGTTTATATCTGATTAAATAATGGACGTGCTC CTACTGAACTGACTTTGCTTATAGAAGTGTCGGCGAAGTTTTGTTGTTTT TTTTAGGATGAGACGAGGATAGATATTTTAACTCGAACTCTTATACTCGT TACTGGCTCCTAATATATCCTCAAATCAATTTTTAGTTAAAAAACTACCG ATTCAAAAAGTTATTCAAAATAATATTCATATTTCAGGTCGATTAGTTGC GGTTGGTGTTCTAGACATTTTACCGAACATTGTTTCTTCGAAATATTTGT TTTACGATCCTGAATATCAATTCCTTTCTTTGGGAACTTACTCTGCATTA AGGTAATTGATTATCGCTAGTACCTCTTTTTTTTTTATAGTTTTCCCACC CCAATTATTGCGTATTTAAATACATTGCAATACACACTCTTGTGCACACT GTGCAAACTAATTTTGCGAATGTCAAGCATTGAAAAATCAGTCACGCCCT TTTCATGTTTAAGTGAAGTTATCAACCAACATCCAACCAGCACACTCACA AGCTTTGATTTTTTTGTGGTTATATCAATTAATTGTAACTTCTGTCTGTA CCTGTGACTCCTTATTTGTTTATTTCCAGGGAGATATATTTTATCCGTTC GTTGTATCGAGAAAGTTTATCCATCAAATACTACTACATGGGTTTCTACA TTCATTCTTGTCTAAAAATGAAATATAAGGTATGGGAGTTTTTTTATTTT CGTTGGGTTTATTCCTTCTTTCATTTAATTCTGAAATCCCGGGCGTGGCA CTCGGGGCACACGGCATGTGCCGCCAAAATAATGGCTTTCAAAATCGGAC CCTTACAGTGCAGCCCTTTAGCAGTGAAAAGGTGCCCTCACAGTACATTT TACCGAACATTTCTGACCCTTACAGTGTAGCTTGACTTCATATCTTATTT TGCTGAAGCCATTCGAAAATGAACCTGAGATGTCGACACAATGTTGAAAA CAAATTATAATAGGTGCGAGTCAAAACTATAAAGATACAACAGATTTTTA CTGTCAGGCTTGCAATTCAGCAGTTCCAAAACACACCCTTACAGTGTTTT CAGATAATAGATGACCCTTGTAGTGCAATTCATCAAAAGTACACCCTTAC AGTGTATTTCGAGGGTCTCGTAAAACCTACCCTTAAAGACGGCATATGCC GTGGGTCGGACTATATGAGTGCCCCCCTCCCCCGGGTCTGAAATATTCTT TAATGGTAAGGCTTAATTTTTACCGTGTCATGTGGCCTATGAGTGGATTT TGGATGTTCTTTTTGTTTTTCAGGGTAGCTTTTTCCCGTCGTATTTATTA TGTCCCGAAACATACATGTGGAAAAGTATAGAAGACTGCTTCGAAAAGTT AGATGCAAGTAAATACGCTAGATTGGAAGAAGATAAAAATAAAGGTAAAG TTTTATTGGTATCTTAATGGAAAACATCAGCATCGAATGTCTTTGAAATC CATCATTCTTTTGAAGTGGAGTGTATTTTCTTGTTCTTCGCCTTGCATTC GAAGGCTAACCCCACATCCCTCGATTGGTGATTCATACTTGAATTATAGG GAGTTTTCTTTGGTAGGCTCTAAACAAGGCACTCAACGTTAATTGTACTG AAGTGAACGAAATAATATTTTTATATGAACTTTTTCTCACTTAGTTGCGG AACAAGTCAATGCATCTGATTCGCTAATTTTGCACAAAGGACGTGCCATG CCATTTCAGGTAAAGTATACTTTTTCAACTGAAATTATAAGAAAATGTGT GTTTCATTTCATAGTTGGCTCTCTACATTCGATCTTCAAGAGACCAATTT TCATCGAATTAAAGAAGGATTTTCGAGATTGAGATTTGAATTAAAAAAGA TTGGCTTCCTCAATTTATTTAAAGCCGTTTTACACAGAATTTTATCTTAA TTCTATCGAATTTATTGCTTTTAGGTCTTCATATCATTAGTGAGTAGTGA ATCTGAAATATCTGACCACAAAAACACTGTTGAAGAATATACTACTTTAG TTGGAGAAGCTTGTAAATCCATACTGTTGTTTCGAAGCTGATATAAAATG GTACCGCTATGAATAGAAAATATCTTTGAATCTAAAATTGTTTGATTTGT TTTGGAGGCTCTTACTTTGGAGTCATCCGTGAAGTCAAAAGAATCCTGTC ATTTTCTTTAGCAGTCGATTTACAATTCCCATAGCTCATTAATTTAATTA TGCACATTGCATCTTTTGTTCATTGTTTTATTATAAAAATTGGTTATTTA GAAGTTTCTTTAATTTATTTAGTTAATTTAAAAGATTGTAGAGAAATCGC AAATTTGCACTTAGAAATATTTCGATGATCTTCAAAAATCATTAGATAAT CCATTCATCGGGAATTACATAAATTTCGTAAATATCATTTTCCTTGTAAA TATTAGAACGTGATGATAGAAGTCAGCTAATTCAAATTTTATCGGTTTTT TCTAAAATTTTGACACGATTGGACACCCCACAAATTTGTAATTAGTTATT TTTATATGTATTTTGCATGATCAATCACTCATCTGAAGTAGAATTCTCGA ATTAAAATTCAATATCCTCAATCTTCGAACCAAAATTTTCATACAG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00057677TCONS_00057677Clytia hemisphaericatranscript
TCONS_00057676TCONS_00057676Clytia hemisphaericatranscript
TCONS_00057675TCONS_00057675Clytia hemisphaericatranscript
TCONS_00057674TCONS_00057674Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00057676-proteinTCONS_00057676-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_297supercontigscaffold_297:22990..30535 -
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
ATE1PREDICTED: arginyl-tRNA--protein transferase 1 isoform X1 Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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min expression (12.34 tpm) - - (104.11 tpm) max expressionaGrOo_1GrOo_2FGOo_1FGOo_2EG_1EG_2P1_1P1_2P2_1P2_2P3_1P3_2PoPr_1PoPr_2St_1St_2GO_1GO_2PH_1PH_2BMF_1BMF_2MMF_1MMF_2M_1M_2GEC_1GEC_2GEN_1GEN_2
Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
104.11 101.71 43.9 31.58 26.95 19.43 20.39 22.08 15.71 14.13 15.52 12.34 41.63 50.35 32.49 23.7 17.74 17.51 45.35 55.93 22.35 22.25 56.98 50.65 25.84 34.8 16.12 12.34 32.39 39.08