XLOC_036697 (gene) - C. hemisphaerica

Overview
NameXLOC_036697
Unique NameXLOC_036697
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_309:544518..554571+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_036697 ID=XLOC_036697|Name=XLOC_036697|organism=Clytia hemisphaerica|type=gene|length=10054bp|location=Sequence derived from alignment at scaffold_309:544518..554571+ (Clytia hemisphaerica)
GATTTTCAACTCTCTAAGAACCTTGGATTTAATTTTAAACGAATCATTCT ATCTGCCTTCGATAGCACTCTTGATGATAGTACAATCTTTTAGAATGGAG TTTTTAATCTATTTGATTGGGATATTTTCAATTGCAGTTTTTTCGACGAA TGCTTCATCTTGCCCGTAAGTATATAAAgtcaatgttttattttttgtct cagacattttttaaagaagaattcgctgaaaaattgttggaaaatatatt tattttagcCATAACTCCCCCCCCCTTCGTACAGACCCCGTGAGATTTAA TttgccagtgggggtaaaaataccGAACCAAAACTCAacggggattgata tttccattttgctcatgactggggatttgaatCTCATATTGTTTTTGAgc aagaaaattcagtgggatggaaaaaatagcacaataatttgcagtgagga ttggcttatctgattatttccagtggggacaaaaattggaggacaATTTT CCACCAggaacgatattttggtcaattttttccaatggaAAGGCTTCCCT TTAGGGCTGTGAAAAGGGAGCTATAATTTGAAATGATGAAAACCAGAAgc ttatcatgtttttatttaaaaattggaTATTCGAACTTCATAAAAAAGGT TACTCGGCAGACTGTAAAAATCTATCAACAAGATAAgatcttaaaaaaat tatatctagTTAATAAAATTAGAAAGTTAACTATATAGAGAGCGAGTTGA TTGGATTGGTTTGTATAGGGCCCGGGAGGGGGTACTAAGGCAAAATGGGT TAAGGGGATGCGCCGCTGgacagggtaccttttttaacctccacgagtcc caggtagggttgcaaaaacaccaatatagaaaaatcagtccctcgcaggg tgcctatttttggaaaatttgcgggaaaagtagaaaaatttagaaaattt tggaatttcagtcccattcagggtcacttttttcgcaaatttccgCAAAC AAACCAGTTTAATATTTCCGTATGGCTGCTATAGATGAAGAAAACTCGTA CCTAGAGCGACTTGCACcccttttttgttattttgttactGAGAACAAAC AAAATTCTATCAAAGTTGGTATCGAAGGTACAGGGttcatttttcaacca tttCTCAACCGTTACAATCAATCCCagaaatgggctattccagaaaaaat ttgcacccaactttcgaccctcggagaaaacaaagaaatattttgtgaat tttacgacccttaccgggataaatttgaccaattttgaccaaatttcgat ctttctgggcgtaaaaagttgaaattttcctatttctcctacccttagtg ggactgaaattagattttctaatttttcagactTTGGAAATcctaaaaag gtacccttaagggcaacacataccgtaccctccatttagCTAAcaccacc cccccccccgggatttgcacccctatgttgaggaggtacTATTTGGAAAG GTGTCCTcctgaattttttaaaaaaatttcaggaccAGCATGGACTttca acctcattttactgaaGGATTTTTACACTCGGCAAGGAGACACCCtgagt tttttattttccaaagcaccatagacctcctcaacatagggggtacagac tatttctggaatagcccaatctgttatattcatttttcaaagcCTGTAAT ATTCATATTGAATTGGATCATAAATCTTATTAAGGATATCTTCTTAGTCG ATTCTCTAGATATTTATGAACTCTGCTCTAGGAACATACcagttaaaaat tttcaatgaaatttgatgTCCTAAATTTTTTAACGTTTTAGCCTAAAAGT GTTCCTAAACATTCTAAAatcactattttgtgagtattttgatgtgattt ttgttttagagttcgTAAAGcttctcaaaatgttcttaattttttcttaa tatCGTGGCCATCAAACCCTTTTGTTCCTATAAAGTATGTTCTTAGTATA AAGCAAGATTTGATAGGATAATGGTAATTTTATCACTGTCCCTTCAAACA AGCATCATAATCCTGCCCCATGATGAGCATCAGTTTAATGAAAGTTTTTG TCTGGTATGTCAATCTGGGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNggaccct ttgagagactttttcctaaattttggtccactttttccaaattttggttt gattttcaccaaattttggtcaaaatttttggaaatcgtgatcctttgag agagaaatttttgattttcgtgattttgggaccctttcagagactaactt ttgaatttatacccctttgagagacttttgaggaatgagaaaNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGGCAATCTGGGTA TGCGTCcctcttttttataaattattgAGAGTCGTCTAAACCACATTGAG GTTTGCTGGATTCACGGTGTCCCCACTGCACACACAAATGACCTCAAATC ATGAAGAACAGTGAAGAAGATAGTGCTCAATAACAAGTAGAGCTAAATCA TTTCATGTATTTCTcttcaaatattaaaaacaaacattacACTGTGTTTC ACGCACAAGGCGATCATCAGATGtggataaaaatttttctaCGAACAAAT TCTACTTGTAGAAATCGAAATACCTAGTCCCAAAGGGAATATCTAAATAA AGCGttaaaatataaaacataatAGGATAGTGATTACATAATGTACAtga ttaaaaagttgaaaaggtgCATATAAAACTATCAACTATCAACGACCCGG GCAAATTTTACATTGGTCTCACTGGCAACACGTTCAAGGATCGTTGGAAC ACACACAAATACACACTGAGACACGAAGATNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNCAGGCGTCACTGACCCAATTCTCTCCTG GGAAATTATTGATCAAGCTGCATCATACAAAAATGGAACAAAAACGTGCA ACCTTTGTTTGGCAGAAAAATTTCACATTGGCTgtgtttagaccagcctg gcgtTTGTAAtagcttgcagtattcttttgaattctattgttccgcgcaa ttgttcggtttgtcaaatgcctaatgatgccagcgtgttggcattacgtt ggcatttgaaatgNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNa cgttggcatttgaaatgccattttgagcaaaggaatccccttttctggca tttcaaatcaaacaaaggaaccaaaacaaagagaaaaaatgacatttttg aatttttatttgcacgttttttattcagttctttctatagattgtaaaat ttgcaaaatttgccatagcctagccctacggcaaaaagtttcagtcttaa tgaNCAAACTAGTGaacaaaaaaactgaattaGTCTCTAAATGCAGGCAT ACAAACAGATTCATTCTAAAGAACTATAAATCAGTCCCTCCGGACAAATA GCTTTTATATGcaccttttcaactttttaatcaTGTACAATATGTAATCA CTATCCTattatgttttatattttaaCGCTTTATTTGGATATTCCCTTTG GGACTAGGTATTTCGATTTCTACAAGTAGAATTTGTTCGtagaaaaattt ttatccaCATCTGATGATCGCCTTGTGCGTGAAACACAAATGACCTctat ttttacacttttttctattgtttataggtgcgaaaaaaagactgagatag ttttagggtggtaaaacagaCGAAAAAATTACCACgcagcaattggcggc tacggttgaaaaggtgtagtGCATTCCATGGCACGTTGTACCTTTCTTAA AAACACCCGCATTTTTTCTCTTCGAGAAAATTTCTAATTAATCTCACTTT ATGATCTTTAGAACTCGTTCCAATGTTATCACATTCGATGACATCAAACA CTCAGCGCGAGCGTCAAGAGAAGTCTACAAAGATGATAAAGCAGTTATTG GCGCTACAATCCGCAAAACACCATACAAGATTGTAAGAGTTTTTGAAGAA GAATTATTTGAGAAAGGAGAAGGAATTCGTGTGGCGATTGCAGATCATGG AAACACAAGAATGATCATTTTCAGAGGAACCGACGGGTAACATACTGATT TTTTCATGTTCTTAATGggttattccagaaaaaatttgtaccccctatgt tgaagagatctttttttaagaagataaccccctggatttttttccaattt ttcaggacccccttggatttttttctcccatttttttggaccaccctgga ttttcgacctcgttatacttaccaccctggattttcaaccccgggggggg ggtactagggttggcgaatgaggggtatgtgcggacgggacctccgaaaa ccgacccttagagagattgatttttgctgaaaaggtgacccttagagaga ctttgaaagatgaaaaaaccgACACATAGctatcatccatttttgcctaa gtacccctcccccgGGTTTTCAACCCAATTTTACTGACCACTCTGGATTT TATCATCCACCTTGgagtttttattttccaaaccaCCCTGGAAGTCACAt ttcctcaacatagggggtacagactatttctggaataaccTGCAGCCATA GTTCGGAGGCACACAACGGCTTCTCCCTGAATTCCTCAAGTTACCCTTGA TCATTGAGCATCAAGAGGCATCAACCTTACTGGAGATTGAACCTAAGCCT TGCACTCCTTTAGCACCACAGAGCGCTGTTCTTGATAAGTTTAGAAATTA AATTACAAAtataatcataaaatatgaAGGACGGGTGCAATTGAatttgt tttagtttttaaaCACATCGGGTGCTACCAAATggttgcaaaaaaaacaa agaaactgaACTACCAATCTTGAACTtgcttctttctttttcaagccAGC CTCATTCAGCTTCTACGCGAGGGAGCAAGATGCAAGAGTCCAAAAACATA GGCTAATAGAAACCAAAGTACTAAAAGGTTTATCGGTATAGttatggaca aaatatttgggaCAAAGGGGATCTccctgcaaaatttcaaacaccacaaa tgatttttaagtgcgTTAAACTACatttggaaagtagagttttaacatga gacttgagacttaggaccttaggatctcaagatttaaaagttcaaatttt tttttcaaaagaagccaccgaaccccttcaaaatcgaaatattcaatgaa agaaagtggaagtgctaaaataacAATCCTGGtccaaactttaaattctg aaaaacgctagaatacactaaaatgtcaatatatttcgaccatgattgta cttaAATGAACATTACCTCTTTCCTTTTTCCAATCCTCTAGGCTCACCCA NaaccatgattgtagttaaatttttcctttttccaaTCTAGACTCACCCA ACTTCTACGCGAGGGAGCAAGTGTCTTGAAAGGTCAGCATGAAATCAATT ATGGACAAAACAGAGTTCAAGTTCTCAAATTTTTCTGGTCAGCTTTTGAG TTGGTTTACCGGTACACATTACCGTATATTCAAGATCCGAAACGGAAATA CATTATCACTGGTCATTCCCTTGGAGGTGCATTGGCCTCAATGATGGCAA TAAAGGGAGCTGTTTATCATGTAAGCTGTGTCCAATGTCGTTATGCGTAA TTTCCTTTTCTGTTTGTCTTTGCgtgattttagttttttattcGTCAGAG GATAAACTATGGGCGTGATAAGGggtcattgatttcaaagcccctTTGGG CCTAGGTTTTTTAATAAAAGGAGCATGTTTATCATGTGAGTTGTTTCCAA TACCTCTGGACATTACTAACCAAATCTTTTAAGAGCCCTACCCCAGCGAA TTACATGATTGGGACCTATTTACATTCTATCATGTAATCAAGATTTTAGC GTGATGCATGATAGGACAAAACATTCGAGGGTTGATATTTGATTTGGGCT TTTGTTCCCCTTAATGATGAACAATTTTAGTGATTGTTTTTTCGTGAAGA AGAAAACACGGGGATGATGGGGCGATGAAGAGTGtccgtggggggggggg gggggggggggggggggggcttttttaaAACCCTTTATATGACTCTGTAG ATCTTTcctaaaagttatgtttttgatgtttttgagctATTCTAAATTAC TTTGGCCTAGTTCATTGCTCCCTGGAGCAATTTCAAagcctcaaaaaatt ttttaaccctTAGCACACATATTCTTtgacaaaatttcttttcatataTT TCTAGTAATTTCCAATGgctaaatttagaaatttcaaagcTCTTTTGAAA GTCTGAAAATAGGTTTCTAACTTTTTCCCTTTGCATATGACTTCATTGTA TTTATGAAAGCTTTTTACTCCAGATTTCTAACAAAGATACCTGTTTTGCC TAAAAGCGGCATTCCAAGGTGATAAAGAAGAGAAGTGAAGATTTCACATT TCCTaatgcattgctctgattactcCAATGACAGACCTGTAATGTTTGAC CTAAACTTACTTCCAATAAACCATAAAATTTTGTGGAGAATACTTCTCTA TGGGGAAGCAAATTTCAGTTTTACTTCAAATTATGCCATATCAAGCATAA CAATAAAATTCATTCGTGACACCGaccgttttgggggaccgttgTTTTAG TTTGCTTGCTATACGCCTATCCTAAGGTTATAAGGGCTGATAAAATGGCT TTTTGTAGCGTAAAATTAACTTAGATTGGTAACTAGGCTAAATTAGATTT TTCACTTAGTTACctcaatatttgaaaataaatattagACTTTTGGATAA AAACTTTGGTCGAAACAGTTTTGAGAAAGAACATTGAGAAATAGAAAACG TCGAGTAACCATACATGATATGGCTAAActaatttgattagttgtttcac gagcccgaccgaccctgaaatcccaaaaatcgaaataagaattaaattaa atttgcagtagaacatttttatttcattgctTTCATTGCTTTAAAGACTG TCAagttggtagtttttccaatgttttgagaattttatgttcgattttat caaagaatttgatctttttgtgtctttttatttaatatttcgcacttttg tcaagatgtagttgtttttgctgcctttttaggagattttaaaggtgaaa ttctacttttattttaattttttcgccGACCAACCGActctcttttttgg gtagcttggcccgtaaaacaacaaattagatTGGCCTCGCATTAGAAATT GATAATCAATATCAAAATAAGTactctaaaaataaaatcatcctAATTCG AACTCGCTTAAATGTTAACAAAATCTCTGACACCATGACACCATTTGGTA AATCTCTCTCTCTTTATACAGTGTAGTCTTCTTAACTCAAAcatctataa ctcgaatgtcttcttaactcgaacacgtTTCATGGTCTTTTTTGAAGATT GCACCAACACGAAGCACCGTGTAACAATtgttagacgatcctatcgtcta cacaagatcacttaAAATCGCCCACTTGgggcggagtaagcagtggtGGA GGTGTTTACGTTTGTTCCAAGCTCTACCGTCACTATATTTTCCATTAACC GTCCTAACACCCTGACTATTCTGCACATATATTATCCCTCGTTTACTATC GCTCTAAcagacgatagcatcgtctaaacGATTGTAAGTTACACAATTGT AAGTGATCAGTTCTTAATTTCAGGAAGATTACGCTCGATTTTTGTGAGTT TTCttagaattctttttgattCTATCTATTTCACTCATTCATTTTGTATA GAAATCTTTATTGGCAAACCCTCAATCGAGTTTGATAACATTTGGTCAAC CACGAGTTGGTGATGCAGCATATGCTAAACTCCATGATCAAATGGTGCCG ACATACCGAAAAATCAGAGTAGTTTTCATGTCTGATCCTGTCACTAAACT CCCTCCTTATGTGGCTGGATACAGACATCATTCTAGGTATGTTCCTAGTC ATGGTACgcatcactgcaatgtcttcgacATCACCCCATAGAatcaacag ctgattggttgtaagtgacataagatcagtcaatacgtcacttgcaacca atcagatGTCGAGTCCCTGTAATGTTAGGAGACAATGGtggcaatggtgc atatcatgaatttcttTAGTGAGATAAATTCTCACGAGTTCTATTTTTAC GTTCCCGCAaatattgatgtttttttatgttttcagaGCCATTTTTGACT GCATTTTTTaactgattaaaaaaaaatagatcttTTTAGTTCGCGAAATA TCGTTATTATTTTTCCGGTGAACTGTTGTTATGGTGGACTGTCGTGCATC CGAGCATCTAGCATTTGAATCTGTCGGTTATGTAAAGTAATTCTCAGTTC CCTTCTCTTCCATATTTCATTATAGAGCTGTATATTTGGGTCGTGGACTA TTCAGTTTTTGGGGTAAGAAGCGAAGCCTGGTAGAACAAGAAATCCAAGA CGAAATTGCAGACCCTGACTTTGAAGACAACGTCGATTCCGCTGATAATG ATTACATAGAACCAAGAAGTAAACGGTTTTTCTTCCCAAAGAGTTATTAT ATGCAAGTCTGTGGAAAAGGAGAGGCTAAATCATGTGTCGTCCATCTCAA TTCCATTGCTCCAAACCTTCTTCATCACGCCATGTTGTTTTATAGTAACG CTTTGGAAAGTTCAAGTCTCAAATTTTGGACTATCAAAAGTGAACGAAAA TCAAGTTGGGAAGATGCTTTTATTGCAAGCTGTCATGGAGAATAACTTTC ACTGGATCCCTTGGATGGGGCTGaaatcatacacgtttttttataagaac atccaaaatttttgaagccttcggatatcCTTAACTTTTTAGGTTAtaag tcaaaaaattttcgtaaaatgttcttattttctcccttttgtgaccattt tgacACATTTTCCTAAAGAATCGGGTTttttcgagtccgcaaagcctata aatgttcttatcttgttcttagcattttggccatcgaagctttattttct tacatagtttgttcttataaaaaaacgtgtaggggTCTAAAATAGGAAAT ATAGTGGTagaaataagatttttcaattttccctacgattttagaaattt caaacttaattTTGGAAATATACTTTTTCTCTCTCCCCCAATAGGTAAAA ACACGatagttttcaaaatatccACTGAATTTTGGAGTGGACAAGAGATT TTGGAATATACCCATCAATTAGAAATAGACTTCACTCTTCAATCTTCACT TTAATACatccccttttcacagacccactgggaacccttcccactggaaa attgaccaaaatatcgtccccagtggaaaattatactcttatttttgtcc ccgctgaaaataatcagataagcaaatcctcattTCAAAATGTTGTGCTA TTCGTTTCGTCCCCACTGAATCTTTCTGGTTTGAAAACAATTGAGCAGTA gtat
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00058249TCONS_00058249Clytia hemisphaericatranscript
TCONS_00058250TCONS_00058250Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00058249-proteinTCONS_00058249-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_309supercontigscaffold_309:544518..554571 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0 0.12 0.12 0.24 0.96 0.5 1.06 0.91 10.25 3.39 28.14 34.16 3.37 4.88 3.22 4 0.3 0.78 1.94 2.48 0.31 0.24 0.23 0.22 0.65 0.53 0.5 0.06 0.48 0.24