XLOC_036808 (gene) - C. hemisphaerica

Overview
NameXLOC_036808
Unique NameXLOC_036808
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_311:48122..49294+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_036808 ID=XLOC_036808|Name=XLOC_036808|organism=Clytia hemisphaerica|type=gene|length=1173bp|location=Sequence derived from alignment at scaffold_311:48122..49294+ (Clytia hemisphaerica)
gaattttcttactTATTCTTTTCATTTATTCTATTTTCTTATTACATTAG
CCtaaggtaggtccattcagcatgtagcttgttttcaTTTAGTCCCATTT
TGGAATACCATTTATTTAATGCAATGCAGCCTTTATAATAATATTTCATC
TGAAGCCATTGGCATAGTATGACCCATTTGAATAGTTTGGGATCATTTAA
TCAATTTAATCTTAAACACCACATTACACTTTTGTAGGAAAAAAGTatag
aattaaaaaatgttttatcatATTTCCTTGGATCACGAAATTCTTTTGCA
TCCTCGTTACTTTGGACCAACTCTTTTGCAGACAgtgaaacaaaaacttt
ttacagAAGTTGAAGGGACATGCACAGGGAAATATGGCTTTGTTATTGCT
GTCACCACTATTGATAATATCGGAGCAGGTNAAAATATGGCTTTGTTATT
GCTGTTACCACGATTGATAATATCGGAGCAGGTCACATTCAACCAGGCCG
TGGTTTTGTTGTTTACCCGGTCAAATATAAAGCTATTGTTTTCAGACCGT
TCAAAGGAGAAGTTTTAGAGGCAGTTGTTACGCAGGTAAATAAAGCAGGA
CTTTTCACAGAAATTGGACCTTTGTCATGTTTCATTTCTCGACATTCCAT
CCCACCAGATATGGaatttgatccaaattcaaATCCACCATGCTACAAAA
CAAAAGATGAAGAAGTTGTTATACAACAAGATGATGAGATCCGTCTCAAA
ATTGTTGGTACCAGAGTCGACGCAAATGATATTTTTGCCATTGGAACTCT
TATGGATGATTTCTTGGGATTGGTTAGTTAGTGATTAGATATGGTTGATG
GGAAACttttattcaaacttttttaaacttatTCTCTTCATTTTGTTATT
GTAAAGATAATTCTTATTTACtacttgattttttatttcctttccAGCCT
GATTCAAATTACTTTGTTTCTAACCCTTCTTAAGTGAGACCAATTTAAta
tgttgttctacgggcagatcgttagaaaaatatgggtcggtcggtcggtc
ggtaaaataagaataaacttttcatttatcagggttcgtaaagtaccgaa
aatattttccaaaaaatttctggatcaaaaaatcacttttttatcttcga
ttaagatcataataaaattttta
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00058420TCONS_00058420Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00058420-proteinTCONS_00058420-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_311supercontigscaffold_311:48122..49294 +
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
POLR2GDNA-directed RNA polymerase II subunit RPB7 Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
57.71	59.77	42.04	43.94	40.02	31.41	30.59	33.64	29.61	24.31	18.58	19.24	12.46	11.27	16.25	16.66	25.88	19.66	5.22	9.13	16.61	17.23	47.39	37.95	20.48	22.98	15.78	13.55	23.76	27.33