XLOC_036814 (gene) - C. hemisphaerica

Overview
NameXLOC_036814
Unique NameXLOC_036814
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_311:86792..93419+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_036814 ID=XLOC_036814|Name=XLOC_036814|organism=Clytia hemisphaerica|type=gene|length=6628bp|location=Sequence derived from alignment at scaffold_311:86792..93419+ (Clytia hemisphaerica)
TaagaattatttaaaaaaatattttaaatacaaATAAATCATGGCTAAAT ACAGCAGGACTGTAAAAGTTGccattttgtgttgtttatGGTACACTCTT TCCTCTGCTAATAATGTCATCGGAAAGAAAGCTTTACGTAAATATCCATA CCCACTAACTATATCACTTTTTCACATGACTGCAAACGCTTTTCTCATGT ACCCTATACTGATGGTGATGGGAAAAGAATACAGTTTTCATTATTCCATG GCATTCTTTTGGAGATTTGTTTTACCGCtgggatttggaaaacttttggc aTCTGTTTCATCGCATATAAGTATTTGGAAAGTGTCTGTGTCTTATGCAC ATACTATCAAGGTAATATGAGCTTTTGATCATtgcattacatgttttttt tctataagcataatgtctataagcatatgcaggcttaGTTTTTGGTAACT AAACAATGActgtttaagaacaatagaatgataagcataatgcgagcctg atataggcgCAGACACTTactcataaaaaaaacatgtactgcTAGACAAT ATTGATTACTGATATTGATCTTTCTACTGATTTTGTAAATTCAtacaatt ttcaataatttaaaGTCAAACTACCATGGCTCGCACCCCCCCCGCCTGAG CGGGGGGAGCTACACCTAAAATTTGCCATATAAGAGGTGGGAGCTGCTTG TTTTTCCTGACAGGCGGGGGGGGGGCTNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNtttttaatttctctaaacctttatgttttc atgcaaagtgtgaaccctttaagtgccaatgtcgtatatatcagacatgg gctatgtaggagggcgaagccaaTTTTTGCCCTGAgaaacttgattctgt cctccagcgaattagtttgaagttttaccacttggcacctttctatcatt cagtcaggtccgcgcctaaatcgggcggcgccgaaggcgcctaaaagaaa gaggagactctaagctatccaacggactataaacgagcttctaactcctt ctagatctggagatataagcctttaaagtttgaagtagcgattttcttta aaaaacttagcaaaaaaatgaccgtggcacttaaagggttaaaatgcaaa aatgaagacattctattgcattctctaaaagtgtacacacatgtaaatag agctttgtgaatgccataaaatttttcccctatactgggacctaaaattt tatcaggctggggggaccttgttctcaggggggacctaaatttggcggga ggacctagaaccccagtcggagccatgaCTACTAGATTTTGATAACATCA ATAAACATCTAAGTTTAGAGGTTTTTTAATTCGAATAAACCATAACACAT TCATAACTTTGCTTTAATGATTATATTCAAatgataaattcttgaaaata tgtttttttatcaGGCATCGCTACCAATCTTCACAGTGACTTTATCCAGA ATTTTGTACCATGAAAAGCAGAGTCAAATGGTATGTGTTTGTCCATGATT CATcttagataaaataaaaaacattatttgtttTGCGAATCTGTTCAAAC TCAAACATTTTCACAGCCTAGAAATAAATAATGTTTACTAAAGTATTTAA TAGTGTCCTTCTTCGGTAATAATTTCTCACAAATAAAAATAGCCATCTTT TCTTTCAGGTCTACCTTTCCCTGATCCCTATCGTGTTTGGCGTTTGCATA GCAACCATGACAGAAATATCATTCGAAATTATTGGCATGCTGAGTGCACT ATTTGCCACTGCAACTTTCAGCGTTCAAAATATCTATTCAAAGCTGGTAA AACTTTCTCACGTTTCTCTttggttttttttatattttgtgtgTATAGAT AGATTTAACATTAATTGACTGTGTTTCTGAAACTAAGAGCATATTGCTTT TAAAAACGTAAACTAAAACGTCATcattttgttctgtttttctcttgttt ttacatgaaaagaaactttttgttgGAATTTTTTGTTGGAATCTTTTGTT GGAATCTTTTTGACCTGATAGTTATGCATGAAAAAAGGGATACAgatcga aaatgccggaaatatgccggaaaaactgtttttttggcattttctcaaga ttttatcattagttttttctgattttttgctcaaagaattAAATGTGTAt aaacaatgcccaaaacatagccgagtccgatttttgagaaaaattttttt ccggcggaaaatgcctgaaatatgccggaaatcggcgtttttctagattt tcattggactttttccttataattggttgttttttcattcaaaaacatta ttgatagcaatgcccaccatcaagaatgtttcaattttcaataaaattga tttttgaagccggaactattttaaaagttgccggaacaacctattttcgc cggaaagacagtatttcttgaattNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNctgtactttat atatttttatgaaattttgcacactgatgcaatatgacaatacctaaaat gtgaNNNNcaatatgacaatacctaaaatgtgacggagcccgattttcga aaaacattttcttccggccgaaaatgccggaaatatgccggaaaaaccgg tttttgactttttctcaaattttcatttttagttttttctgattttttgt agaaagatgcgtattcgcaatgctcaaaaaatggcagagttcgatttttg agaaaaaaatttttcctgttaaaaatgccggaaatcgccgtttttgcaga ttttcattggattttttccctatatttctatgtttttcacacgaaaacat tattgataacaatgctcaccatcaagcatgattcaattgtcaataaaact gatttttgcaaccagaacttcctatttattttttccctacaaccctcccc cccatcaacaatcaatgagatgaatttattgtgttgtgtattttcgctaa acgctatattttctgactgatttttaaaatttttcttttcgcattgctat ctaactttgaTCATCAGGTAGGTTCATTTatcatgttgcttgttttatcT TATTCTTTTTGAAGGCTTTGAAAGAAGTACGGTTGAACCCAATACAATTG TTGATGAAAATCTCACAAACAGCTCTCATCATTTGCATTCCTCTCTGGTT GTTTGTTGACACACCCACCATCGTCACTGATGATCGGCTGGTAAGATGAT TATTCTTTCCGGGGAagggtccagaaaaaaaatgtgaattttgatttttg aaaaaatctttcatatAGGAATATTGATAATTCAATAATTCAAATTCCAA TATTGATAACCTATCACAAAAATCATTATCGGCTGAGTGATATATGATTG TGACCTTTATTTTTCACTACTATGTGAAAACTATGAAGACATAATTCTGT AATTGATCCTGAATGGGAAACAGAAAAAATGACACAacgataaaattgaa aaatagaaaagaaaaataaacagtaaaataacaaaagatacCCAATAAAA TCTCTGACATTCTTCTCTTTTAGGTGAATTTTGAAGATCAAATCGACTTT TTGTTTCGACTATTGGTCAGCGGTTTGATTAACTGGTTGCAGAACATACT TGCGTTCTCCATCTTGAATTTGTTGTCCCCTTTGAGTTATTCGGTTGCCA ACGCAACGAAAAGGATCCTGGTCATTATCAGTTCTGTCCTGACGTTGAAG AACCCAGTAACCATGACCNAATTCTTGTCATTATTAGTTCTGTCCTGACC TTGAAGAACCCGGTAACCATGACCAACTTCTTTGGAATGATGCTGGCTGT CCTTGGTGTATTCCTTTACAATAGGGTATGTGacatttattttaaaactt tcgTCTCATTTATCTTACCTGTCATCCTCTTTTAccaattattttttcat ttgccattttcttctaatttggtagactggagtcgtttataatccaCGTA ATACAGTGATATTATTGATAATATCAATTTGTATAAGCTATAATTTGTCC CTTCCACTATTTTTTTCCTTATGTCTCAATTGGTCGTCTAACTACTAATT TTGAAGCAGATTTACAAAAAGAACAAATAAGAGAAGCACATTATGCAACA AAGGCTCTTTGTAATTGCAAGAATTTTACCACTGTACCCACAGTTCTATT CGGTTATCTTACTAATTGTAGGGTAACCCATAGAAAAGTgcaagattttt tttgaatttggattttttttgtaTCAACCTTCTCACCAATTGTCACGATG ATTGTTATATTGAAAAGCTAAGGCTGCATAAAtggattttgttgattttt acagTTGGCCctctcttattcgatcttcaagggaccaagaattttcttcg aagaGGAGAAAGATTCGAGTTACAGAAAAGATTTTATACTAATTTCTAGC TGacgggaccaatattttagttcgaattatagaaagattcgaatagtaga ggttcgaattagagagagttaaaTTTACTTTATCCTATTGATGCTAATTT TAAATCCGTCCGTTATGTATCAAATCGGTATCAAAGACTTTTATGAATGT GATCTGATGGCCAaccaaatatttttacaaactcATGTTTAACTTTCATT CCACACAGGCAAAGATTTTCCAGAACTCGAAGAAGAATTTATTACCAAAG ACAACGAAAGACGTTGCAGCCGGAGGGGAAGAAGAACAGTATGTCTCCAC CAGGTATCGTGTCTTCCATCGTATGAATGGCATCTAGTGTGCATGTGCCC TAACAGATTAATGGTATGACAGTGTAGATCTGGCTTAAGTTCTGAGACCA TGCTCagacaaaacaaaatggtacTACTTGTTGAGGCCAATGTTtgaagt gatgagattttattTAAGCCAGTCACACTTTAACATCGACCTGAAGTCGG ATGGGAAACACttggtaaaaaaaagaaaacgttcacaaaaactactttct gtcagagaaaattttttgatttcttttatagactttgtttttatcattaT TCCATAACAAAGTCGTAACAGACGGGGGTCGCTTTAGGAGCACATACTCT CAGGTGTCTTGTAAATGGTAAAGTCGGGGATATCAAATTAATAAAAGGGG GAACTTAATCGAATAACCCAGAGTTAGATCAAAGACAAAGATCAGGATAT TTACAATATTTAGAATAGgaaattgttcttttaacagcttaaaatattta caaaattgataaACAGTGTATCTATCTTACAGATAAGGATCgagcatggc gttctaaattcatTGAAACGCCATggaatcgagaaaaaaaattggggaat TCACAAACGGTTTTTGGTATCTGGGAGTATGTagctttttcttttcaaaa ttgaaaattttataactgataaaaaaagttttatggtatttcgaaaaaat ctttgaaGGAAACTACTTTTTTGATCTGTGATTGCTATTTTAATCCtttc aaagtgaaagtttgGTTGCTTCAGTTTTGAAGACgatgttttttattatt tatactTTATAGAGTTAATTATTTATGATGAATATTATTataggtaggta ggtaggtagtTAGGTAGGTGACACACGACGTtctttcaacgtccatctaa cgttaaatggacgttgtggacATTAAATTGATGTTGAAagaacgttatgt gccagctggttAGGGAGGTGATCCGCTGACAAATGTTTACCTTTGCGGGG GAGTCTACCATAGATCAAGAAAAGTCCAAGGGTAATAGTTTTCCTAGAAT ATTGCTAGCCAACAGACACTGATATTGTTTCAACGAAAACTTAAGATCGC AGACTCAGTGATTaaagcaaggtttttcgtcTGAGACAGGAAATGCATTT TACGTAAATCAGGCCCGACGGAAGCGGAAAGTCTGGGGAGATTTCAGCGT CCCCACTTCAGGGGCTGTTCCGAAGGGCCTGCAAATTGGCACATCATATT GGAATTTCGGTGAATTATGCTGAATTTTGAgacgaaaaagtttcttttat agacTTCGCTGTGACAGAAGAACTGTTAACTCTAAAAACTTTGAAACTAT AAGttttggaaagaatttttttttttttcaactgatTTGTTTATAAAGAA TTGAATAGATAGTtatatttttgttgttgtttttatttatgaCGCATCTT CgtaaaatacagttgacgctctctaattcggcGTTCTTATTTTCGATAGg gtcccttattcgatgaaatttaaagtccccgtaaACAAGAAATTCTCATT AACGACGCTgtcttattcgataagctcccttattcgatgaaaatctaatt ccccttgaagatcgaattagagagtgtcaactgtagtAGATTTTATTTTA CCAACAAATAATTTTCCTTCTCTTTTTG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00058426TCONS_00058426Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00058426-proteinTCONS_00058426-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_311supercontigscaffold_311:86792..93419 +
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
SLC35E1solute carrier family 35 member E1 Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
4.45 4.22 6.89 8.52 7.49 6.17 12.16 12.81 9.83 11.38 9.75 6.35 5.99 5.16 5.51 6.83 8.02 7.66 3.65 5.7 5.88 5.66 6.18 7.86 5.03 5.7 8.63 7.32 12.38 10.41