XLOC_036821 (gene) - C. hemisphaerica

Overview
NameXLOC_036821
Unique NameXLOC_036821
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_311:237188..242216+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_036821 ID=XLOC_036821|Name=XLOC_036821|organism=Clytia hemisphaerica|type=gene|length=5029bp|location=Sequence derived from alignment at scaffold_311:237188..242216+ (Clytia hemisphaerica)
TTTTGGGTGTTGTAATCTATTCAGTCGAGAGTAGAGACAACAGAACGCGC ATCGCCAAACGTTCAGCTAGCGTTTACAGCGTGGAAGGATGCTTCAGGTA AGGTGATTCTGCCGAGTCATATTATCTCATTACACTATTTCATCAATATT CTTGCTTTATCTCTGAAGTATTACTTTTATAATTAATGAGGCCCCCGGGg gagggtacttaggcaagtgaagggtGTGGGTATGTGTCACCCTTAAGGGT GCCTCTTTTTGGACCTGAaagtccctgtaagggttgaaaaaaaaacagaa cattAAATTtcagggtcggaaaaataggaaagtttcaactttttgctcct tgaaagatcaaaatttggtcaaattagtcccaataagggtcgtgaAAATC GCAAAACTTTTCCcatttttctcacttttagtCCCGCTTAGGGTCAAAGG TCAAAGGTCGGGTGGGACATACCCGTCAGtttgcaaccctagtaccccct cccccgggctgAGGCCTTAAGTTAAACCCTTCATCACGGCATCATGTCAA ATGTTTGCTCTCAtcacgaaaatgaaaaactagCCTGAATCAATAGCTTA AATTTTTTCCTTCTCGTGCATCACACCAATTTTGAGCACAAGTAAAGAGC AGGAAAAAGAGCCCCAATTACGCCTTCGCTCAAAAACAAATGGTGGCATC ATCACTTTTTTTAGACTGGCACGGTACCAGcaggaaaagtgagcgtagtg GAGTTAAGCAAGCgtaagaagaaattttgtcgacGGCAAGGGACCCGGCA AGGGCttttaatcagcagcctctcaccagctttttctccttctcctatgc agctcctattctagcaaacgcccgccgcttTTATGATACCGCCCTCTGAT ATGATTAATTAACAggctagtttgctagtctacactttttttgaccatat cGATATTTCAATATAAAGATTTAAAgaacaaaaatctatttttggaTTGA ATCCAATTTTTATGGGATGGCgcaatataatatatatatgtGATTTATTT GGTAACCAATTTACAGCCCAACCGAGTGGTCAAAGGCATGAGCGTTGTTA ACCTATACTAGACGCCACCCGcgtttttttctacgcaattaacaaCATAA CATTTCGCGTTATTTGGTTCTTAGTGAGGTATACTCGCTAGAGAGTTGTA AGCACTACAAAAAATGAGCTGACAGGTCAAATCCCCGCTCCTTCTAGTGT TTCGTTTGGTTCATAGAAAACCGACCCGGCTCTGAACCTTGTGAAAACTT GAAAGACTCGCTTAAAGCCCTAGATTACTTGGCTATTTACGTAAGATATC GATTCTATAAATACATCTATCTATctatgtatttttgaaaaatatttgtc agTTAATAAAAAACTAAATTGCTCTAGATAGCCTGTTTTGGTATATAATT ACCTTTGGGGTTTTAAGAGGGACAATGACCAACATCAGGtaattagcccc cccccccccaatttatTACTTTATGTTTactaatacatgtttttttcttt aagcataacatttataagcatatgcaggcaaTAGAATGCTAGGCATAATG tgagacacttgcttataaaaaaaacgatcTTAGATTACCTCTTGTGAAAA TAAGTTTCCTTCTCCACTGATGGGATACTGATAAAGTATAATTCGTGATA TAAAGATCAAACTCATTTTCTTTGCCAGGATGTTTCCACCGGGTTCTTTG GATTCATCAGACATGGGAATTCATCAAAGTTCCAATATTAGATGTCAAGA AATTTGTCGTGATAAAGGATATGTGCTCGCCGCTACTAAAGGTAAAACGT TGATTATTTAAGTCTTATATCACACTTAAACTTCATGGTCTCAGGGGGAT ATCCAGAAAGGTATTCTagcatgaaacaaaaaaatgattatCATATAATT CACATTGACCCTTTTAGAACCCTTTTTTGAGACTTAGTGATTTTGACAAT CTGCCAGGGATTTTCAGATAAGTTGGTATTTCCATTAACCCAATTTTACA GAAGTGCTCCCCAAGACCCTACAGAGGTACAGTAATCGATGAAATTGTAC ATGTATACAGTACTTGTATGATAACATACGTCTTACGAACTTTGAATTAC TTACAGGTCAGATGTGTCATTGTTCGAATATTTATCCACGAGGAAAAAAA GTAGTCGATCAAGAATGTTCTACAAGATGTCGTTCATATACACCATGTCA TGATGTCCAGAGCTGTTGTGGAGGTCCCAACGCATACTCTGTTAGCGTGG TAGGAGATATTGACGTGGCCAAACAAACGTTGAGAAGACTGGCCAATAAA TGGCAAACGAATGTGGGATATCATAATTCAATGTTGAGACATGTTGGATT ACTTTACGATGCTGATTGGAGATCTTCTATTGAGAATGGAGGTTTGAGTT TTATTAAAAGCATTCTTTTCCAGCTggaacacaacgttgtttcaacgttt atctaacattcacaacgtccatataacgttaaatgaacgttgaaacaacg ttgtgtgccagctgggattatTTNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNcccccccccccccggatataAGGGGACCATTGGACCattcatttc tttcctttttctacAATGTATATTGGGTTTCGTTATGGTTAGTCActagt ttgtatttttttcagagTGTATATAACTTCACTATATATCTTTTAGGCTG GTCGAAATGCAATAAGGAACATTACATCAATGGGCTATCAAGAGAAAACC AATACAGTGGATCGTCGTCTGATCCTCTTGGAAGAATCGATTATGCAAGT TGCCAAAAGGAGCCTGGAGATCAAGTTTGCAACTATCAATTCGCTTTTCT ATTCACCAGTGGAAGGGTTTGGAAGTATTGTAAACAAGGATACTTTATGT CTGGTGTCTTCACTCAACCAGGGGCTCAAAAAATCTCCGATCTTGCCCAA TTCCATTGTTGCCGACCCaagaaacaaaaagaacaaTGGGGACATTGTTA TAATCACGATGTATCTTCATCCTTAGATAATAAAGGTTGGTCTACATGTC GATCCGGATATTTCATGGCTGGAATGGAGCGAGGTGATTGTGATGGTTTA CACTGcgtcaatcaaatcaaatgttGTCAAATGGAAAACCTGGCTGTCAG TGAAAACCCAAAATTGTCCATCAAGCTCAAGGACACCACAAACAAAGGAC AATTGAAAGAATGCACCATGGAAGCAAGAGATCTTACACCTGAAAGTAAA ACCTACGAATGCAAATCTCTCAGTAATTTGAAAGATGTGGCAAGTTTGGA ATCTGTATCTTTCAAGATGGAAGACGAATCAGATCCTTTGACTTCGAAAC CCGAACGTGTCAAAAATTATATCCCTGTTATCTGTATGCCAGCTTCTTCA AACTACGAGTGCAAGAAAGTCTTAGCTGTTTCAGTGGCACAATCCAGTAC TTTGACTATCGGCTCTGGCTTCTCCATGACCACGACATTTGGTGTGAAAA CAGCTTTCGAAGCGAATTGGTTTGGGCAGAAATTCAAGAATGAAATCTCA TTTGAATTATCAGCATCTTCTTCTCTCAATATTGGTACAAGTAAAACAAC AACCAAAACGGTAACCGATACAACATGGGTGACCGTTAAGGTTCCAGCTA ACCAGCAAGTTATGATTGATCTCCTTCGACAGAAAATCGACATCGTTTAC AAATGGAGTGGCGTTTTTCGTCTTCTTGGTAAATACAAAATGAATTGGCA GACAGCCAAGAAAGAAGAAACGAAACAAGATATCACAACAGTATTGAGTG GTCCTGATCGTGAGATGTATGCTTTCGGTAAATGGAAATATCCAAATACT GACGTGTTACAAGTCGTGGTGACTGATAAATATGGTGAGAAGAAAGGATG TGAACATGCAACAGGTGTTGATAAAAACTGTCTCATTGATTGATTCAAAT GTTTTTTAGGGTGTTtgttattataagcatttttttgtgtatttttcaaG TACTATCTTTTGTTTAAGACAATAAAAAG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00058433TCONS_00058433Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00058433-proteinTCONS_00058433-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_311supercontigscaffold_311:237188..242216 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

min expression (0 tpm) - - (72.11 tpm) max expressionaGrOo_1GrOo_2FGOo_1FGOo_2EG_1EG_2P1_1P1_2P2_1P2_2P3_1P3_2PoPr_1PoPr_2St_1St_2GO_1GO_2PH_1PH_2BMF_1BMF_2MMF_1MMF_2M_1M_2GEC_1GEC_2GEN_1GEN_2
Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.15 0.08 0.05 0.15 0.17 0.09 0.08 0 0.08 0.17 0.03 0.1 40.14 42.08 7.14 17.77 5.63 4.41 63.42 72.11 27.37 26.85 18.96 25.77 39.22 46.69 0.35 0.5 6.44 10.95