XLOC_036827 (gene) - C. hemisphaerica

Overview
NameXLOC_036827
Unique NameXLOC_036827
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_311:468557..472227+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_036827 ID=XLOC_036827|Name=XLOC_036827|organism=Clytia hemisphaerica|type=gene|length=3671bp|location=Sequence derived from alignment at scaffold_311:468557..472227+ (Clytia hemisphaerica)
atttaagaacattttaggctgaaaattgctaaaaaaaataagcacatcca
ggctcagccaaattttaggtgttctaaaaaaaaaaaaaacgtgtattact
aaagaagaagaaaaatccaAGAAGAAAAATAGTTTGGTTTGTTTGTTGGC
AAAGAAAGAGATATAAAGAAGAAGTATGGGTAGTCAAGGTAAAATGTTTA
TACTTATTTAacgaacacccctgtctcaatgaccCGGTGATTTTTTTAGT
GGGGTCGAATGTTAGATTTGATACCAATGCAATGGGGACATAAGATTGCT
TGTTATAACATCTCTCTGTTTTAACGCTATAACGTCAATGGATTTCAAAT
CATGCAGTTTAACATAGCTCGTAAATTAAGTGAGGGTTTTAAGAATTacc
gaaaaaaatattacaagaGGGATGAATACAGCTGATTCTCCATAATCTCC
ATAATCTAATGCTTATTTTAACTTATCATTATCAAGTCAATAAAATATAC
AACAAACAGCCGGCCGGGCACTCAAGATAAGCGACGTTCGAAAGTGCTCT
TCATCAAGGGTTGAAATGAgagataagaaaaataaaaattttttggcaAA
CTTTGGGAAAATCTGAcaatttttagcttaaaataaATAATACAAGAAAT
CGCACCTTTTTCGCTTAAACTTACTCAAgttttgttaaactttttcagCA
CTTTAAACAAATCACACATGCGCTAAATTTTCAGATCGCGTGAGGGAGCA
AACATTGCCTTAGCAATATTCGTAGAATTTTAAATGCAAAGTAATCACCT
CTGTAACGTTAATTGGAAATAATTAAAGGCGTTTTCTTTGTACAGTAAAC
TCTCACTTACccggctggcacacaacgttgttttaatgtccaaataacgt
tatttggacgttgtgaatgtcacatggacgttgttttgacgttgtgtgcc
gtctgggaaTTCAAACTTCTATCATTTAAATCTTTCTATTATTCCCAGTC
CTTGTCAAGGAgaaaaccctcttaaaatactttctacaattcgaatctct
ctgtaaatTGATGAAATAAGATTCCCCGCCCGAGTTCGAGTTAACACAAG
TCACCTGTATTTTGTACATTCTGCTACAATGTGTCCGGAAATCGACAGAg
aatttatcaataaaaatccataataattttgttactttttatgatgtaTT
TGAACAAAGCAAAGTAGGAACTGGAATTTTCTCAGAGGCCCGGGCAAAAA
GGGTTACGGagatgtgccgctggtcagtGTACCATTTTCACCTCCATGAG
TCcaaggtagggtcgcaaaaacgacaaaatagaaaaaagtagCCCGTCGT
AGGCTgcctttttggggaaaatttagaaaatagaGTTAAACTTAAGAAAa
ctttggaatttcagtcccattcaggttcggaaattttggaaaaattttcc
caaaaaacgagtcccacgtggGTTAGCATTTTTTGGACCCCCTGggaatt
ctattgaataaagaagtatttttttctatgaaattgAGAATTTTTACTTT
ATGCAAGATCTTTTCCCTCAGAACCCCGTCGGCCCACACCTAACCATTCC
CTAAAAAACATTATCTTCTTCTTTTAGCACCACCATACAACCCTGCATCA
GCACCACAGTACCCACCCACCTCACAACCCTACCCACCAACCTCTCAGCC
TCAATATGCACCAACCTCTCAACCCTACTACCCACCCACTTCTCAACCGC
AGTACCCACCTACCTCTCAACCAGGATATGGGTACCCACAAAACCAGCAA
CCACCACCCAGTGGAAAATACCCCGAGCCTCCACCAGGGTATACTGCTCA
ACAACCCATGCCTCAACAACATGTAAGTAgaaactttttattatttttgg
ttgTGTAGTGTTCTCTACTGAAgggcttcatttttctttttcctagggCT
AGATAATAAGTTAGAAGGGGTTGAAGCCGGAgtacaggcccggcggaagc
ggggagcctggggagacttcagcctcctcacttttaagaaaatgagattt
tttatcaaattcctagcaaatttctcattttgagccttcagtcTCCCCAA
TCTTAccgttgttccgccgggcctggaGTAAGGATCTTTTCAATATCCAT
CTatcattttttttcgtcactttcaaCGCTGTACTTATAATCATGACTGC
AATCAGGCAATTAACATGGCAGATAGCCGTTTACTAAATTAACATAAAAG
CTCAACTATTCCAAAGGAGAGACACAAGTTTCTGAACAGATAGTTATAAG
AAAAACTCTATAAATTATCTCACCTTCCTTTTTTAGCGCCTTTGTCTAGT
CCTACTAATCTAGACAAGTAGCAAGGTTTTTTAGCATTGAATTCATCTCC
GACTACATAAACCAAATCTCAGCTGCCACAGTGCACAGAGAACGTCGTTA
AAATATCCAGCTGAGGTCCctgatgaacgttgaaacgtgtgtcagctggg
attACTCAACATTGATAATTTACTTCTTTTCCCAGGAAAGGAATATTTGG
CCACTAAGATTTTGATGTTCACACCGTCCATAGAAAGTCTAAGAAACGtt
caaacaacgttgtgtaccagctgggtttTTTTTTCTGGTTTAAAATTTGA
TAATCCTTTTTCTCTCTAGCATCAACAGAGTAGTATGACTACAAATTCAA
CCACCGTCATCATGGCTGGCGGTATGGCTCCACAACCGCAAATTGTGCAC
CAAGCGGCACCACCAAATTACATGGCTTTATCATGGATTGTCTGTCTGTT
CTTTTGTTGGCCAATTGGTATCGCCGCCATTATGGCTTCCTCCGGGGTAA
GTTAAAGACTGTAGTTTACTGTTTGTTAATTGATGAAAACTAATGAAAGC
CTAGCTTCTGATGATGAAAAGCTTTTTGCTAAACCCtatgtaaaaaacaa
aaaaaatatataaactcgACCAATGAtggcttcaaaaagttttgccgAAC
GTGTCGCAATTTTATTCCCGGTCACGGAAAATCATGCAATGTACCTATTA
AGCTAATGAAATGCATTATGGGTTGACTCACTAAATCATTTCATCCACTA
AGCAGACGCAATTTATCCTTAATGATTTAAACCAtggttctttattttca
ctcaGTTCTGACGTTATGTCACTGGCAAAAATTAGGATCCCCAAGTTAAG
ATCTTTAAAACGTCAAACGATGGGTGTTGTAAACAGGGATGGTAAATTAC
ATCATCACATGTCTCACAGCCACCTAGACAGGATCTAGACATTTTATTGT
CCCTAATCGAAAATtctctacatgttttttttttatattgaatttcaaat
agggATGGAAATACTGCTAAtagggctgaaattgtagggtatttgtCTCA
CCGAGAACGGAATTTCTGCTAATTTTTCCGGTGGGGCGCACCCCTGGGAC
ACATGAGTGTcaaattgaaaatgcttcaaaatatcaaaagtcATTTCTGT
TGNACATGAGTGTCAAATTGAAATTGcttcaaaacatcaaaacattacTT
CTGTTGTTTTTACAGGTTGATTCGGCCGTAGCAGTTGGCAACTATGCTGA
AGCACAAAGTCAATCATCACGAGCAAAGGGTCTGGGAATAGCTGGTCTGG
TCTGTGGAATTAtcattattg
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00058444TCONS_00058444Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00058444-proteinTCONS_00058444-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_311supercontigscaffold_311:468557..472227 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.07	0.26	0.31	0.09	1.05	0.42	2.51	2.51	2.45	4.66	3.98	1.86	10.28	8.44	9.06	9.02	4.79	3.04	8.26	13.82	2.29	2.27	1.53	2.68	0.66	0.52	13.26	10.42	9.9	9.16