XLOC_037145 (gene) - C. hemisphaerica

Overview
NameXLOC_037145
Unique NameXLOC_037145
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_315:371377..378133+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_037145 ID=XLOC_037145|Name=XLOC_037145|organism=Clytia hemisphaerica|type=gene|length=6757bp|location=Sequence derived from alignment at scaffold_315:371377..378133+ (Clytia hemisphaerica)
ATGACTGacacaaatgttaaaatattattttcacaGATGATTATGTTGAA ACAGACGAAGGGAGTGAAGATTATAGAGAGGTAGGTTATACTCGGTCAAC ACCTTCACAAATTTGATATCTTTGCTGAAAGATTTATTTTCATACATAAA CCTTGCATAaatcaaatatatttcattaacaagttaaaaattttcTACAC ATTACTAATAGTTTCATGCTTTCATACAGCAACAATCATCAGAtgtaaat gaaaatcaaaaacatactctttcttatctacagaaattaaaaatttgaaa aaattgatttaagtgttaaaaagtgataaaataaaTGCGTGCCTATTATA TTGTTCATCCACACAATTGATACATAAACCTTTCATAACATTCTTATTAT GGTAGTTTGATTATTATAAtctgatttcattttcaaattcagcGTTTTGA AAGGGAACAACAGTACATACATGACGAACAAAAACACATTCAAAAAGTTC ATAAAGAATTATGTGATATCAACCAAAAATTACAGGTTTGTTTACTTATT AATTTGTCTAATTTGGCTAGCTTCATAGGATTTTGAGACCATTCTTTATA TCTGTTATTGGCAAGGTATGATCCAATCATGATTGGTCGAAACTGTTCTG TATTCAGCTTTTCctttctttgttaatttttcactGCTACATACAAACAC AACCCCTTTTCCGTTCCCAATTCCATCCCTCATTTCGACTTTTATATTCT TAAAATCTAAATTACTTCAATCAAAATGTTATAACTCTTTATCTAAACAG GAGGAACATAAACGACTTAAAGAATGGGAATACAAATTGATGAAAAGGGA CAGTCTTTTAAAACGTAAAGAAAAGGAGTTATCCAACTGTGCCGATTCCA TGAAAACAGCCCTTCAGAATGAACTCAAAGAACAAGGATCCAGACTGGGA GAggtatttataaaaactttctTGTGCTCAATCTATTAGAATGCGTACTA ATCCGAGCTCGTTGATATTTTAAGTGAGTAAGTTTGCAACCGCAGTCGAg agcgacccgaaggctcctttttCTCTAGCTGAAGGTagggggagggcgcc actcctttccctggatctCTCCATTTGCCCTTGATCCatctctttaattg ctgagcatcaagcataGAGGCATCAAGCATAGAGGCATCAAGTatcattt tggaaatctttggtatgacccggctggggatcgaacccacaaccttgcgc accgtagctggatgctctaccttcatgctattGATATTTTAACCAGACAG CCAGTTCTAAATGTGATCCACTTGAGTAAGTGTAGATGTTTTTTCTCCCT TTAAATAAAGTTGATGTTTTTGCTCCTTTTAGGAATCGGATGAAAGACTG AAAGAGTTGTCGAATGAGAATAAGAAAATTCGAAATACAATGAAAATTCT gacaaaatcaaatgaaaatgtTAGAAAACGTGTAAGTTAGGATTGATTAG CCCTTTTAGCGTTCTGGGGAGGGGGTCTaaacaaaaatgttgaataactT AAAGATTTCAACCTAGCCAATAATTTACTGATGCCTTCATTGTCTTTGAG AATTCCCGAAAAATAGGACCCTTTCATATTTATTTTGCATTCTTTTGTTT AAACCTTTTAATGCATTGCATCACCACAGGATAATTATTTTTGAGGCACG ATGGGCTAAGGGCTAGTATAGTCCACATAACTTCTCATCATTACTTTTGA ATGAATGGTTTTTATGCATTTATATCTTAGGCTGAAGAAGGTGAATTAAA GATACAGAAGTACGAAGAAAAAACTCAGAATCTCCAAAACCGAATCTCAA ATTTGCAGGTACCCTAATCTGAATTGATCTGTATGACGTTTTTCTGTGTT TCTTATTTCGACTTCAGAGCCGTTTTGTTTGTTCCTTACGGGATTTATAT TAAACTTGTTCTCTTTCATTTATTCAGCGAAAGGTAGAAATCTTACAGGA CCAGAACAAGAAGCAGACATCACAAACAAAATATTCATCTAATAACAGCG GTAATTGTCTGGACCTTTGACCTGTTATAGacagttttgtttttctttat aattctTTAAGTAGTGTTTTTGATAACTAAATTCGTTGGATTATTTATCT TTAAATATCAAGCTACGAATGACACTGTAGACTCCCTGTGATTGAAGCTT ATGTTATTAATGGATGAATATTCTTCACCAGAATTCTGAACAAAAAAtac ttgtttatttttgtagatAGAAAGATTTCAATACCGTCTAAAGAAGAAAC AACAGTACGTTCgcttagattttttttcttgcgGCATTGCATGTGGTGTA GTGACGATACTCATAGGTTCATAGGTGTTTGAAGGTGCGAAGGTATCTAT CCAGGGATGATTCGGATGGTTCACTTTTTTTCTCTATCTATTCATATTTC AACTTCTATTTCAGCCTGTTTTCTACGAGGTTTTTGGTTCAACGTTGCAA TGGATATCAGAAAAGTATCTCACTACGAACATAGTGAATTTAATCAAACA TAAACCTCAAAGTGAACATGATCCCTCTGTAGAAGTGAccaatgaaaaat ttttgaaggtgcgaaattttaaaatattgtatGAAAGTAAAAACATTAAT TTGTTTCCAATTCTTATCAAGACATTTCATCGGTCATTCCAGTCACCAGT CTCAGTTAAAACATTAGACCATTTCTATTAATATCCATACatcaaatttt aacattttccagCGGATATTCGATCAATTTCAAAGgttttggcttgaaaa ggttcATCCACCCCCTGTATCGACATCAAATTGAACAGCAAATTTCAGTA GCCGAATCAAAGAATTTGCTGAGGTTTTATAAAGGGTTTTAATCTGAAGT TTTATGAAACTATACCTTACGCCAGGGCATACTCTGCTACATAATACATT GTCGTCATTTTCTCTCAGGTTTTAGTCTTGCTGCCCCGTATTTTACCGCA AATTGGTCAACTGCAAACAGACGTACAGCTGGGATATCTTCAATTCATTT ATTGGTCTATTCTTCATGCTGGCCTTTCCCAATCTTCTCAGGTTAGTTGC CTTGAAAGAACATTAGATACATAGTTCgacttttggtttttgttttctCC AAGAAGGAAGAATTGTACAAATTGTACAAATCACAGCTAAGCACAAATTG TTATATGAGCCCCCgcccccagcggaccttcaattcacgcaatcacgcaa ttttttttcaaaaattcacgcattcacgcaatgttcTTTTGCAATTaacg caatttttgttcacgcaaagtTTCCCAACTcacacattcacgcaattttt ttttattttcacgtatacgcattcacgcaaactgcTGGGGCCCCTTATAT TATGAGATTTGATTATATTTTCCCTCTCTCTTCCAGAAATATTGCCATTC TGCTACTTATCGAAGAATTGGAGAAGAATTATACCAGCCCTCTTTGGTAC GTTTGCTTTTTTCTCAGTTTTgtcatctttaaaataaaaaaacactttgA AGAACTTGTTGAACCTTTAAAGTACCAATGACGAGTATACTAGACATTGG CTATTTAGGAGGCTGTAATGcacagtttgagttagaaatcgtcatttttg gtctaactcgtaggaattggattgggtttcatggtcaagcaaaaaaaaaa tcaaaagtgagtctttcCAGCGAGATTTTAAGCCAAAAAGTCAAAAAAAA TGCAAAGATTTGACAAAAATCCACTTTTTTGAGATTTTGACCGTTTTTTG ACTATTTTTGGTCAACGAATGATCCAAGAACCTCCAAATTTGGCTCTGCT TTACTTGATTCTGTCCTCCAGCGTATCAATTTGAAGTTTTACCATTGGGC ATCTTTCTATCATTCAGGCAGGTCCGCGCAACTTTAATTCCCTTTACCGC CGCCCAACCCGTCCTTCCTAAATCGGGAGACTCTAAGCTATCCAACGAAC TATAAACGAGCTTCTAACTCCTTCTAGATCCCGGAGATAAGCCTTtaaag tttgaactagcgaatttctttaaaaaacttagaaaaaaatgaccgtggta cttaaagggttaaatgcTGTTTCTTGGttatttttaacaaatttcttttt cgtcTCTTTTAGGCTCAGAAGGATAAAGAAACATCGCCTTCTTTTTACCG CAATAAAAATGTCCACGTTAGATTGCTTTCAAAACTGATCTTGTTGTATA CCATTACACAAGGTAGGTTTCGCTTTTTTAGTTGGTTGGAATgaaaagat gtgatttataAAATTTACAATGATTTACAGAAAGCATCTGGCGGTAAGAT TAAATTGGTTCTAACTTTCATATTTTAGCTGACGTTTTATCGCAAGTTTT TCAAACGCTGAATCAAGACTTACGCTTGGAGAATGtaagttatttttatt tagcTCTACCGGCAATTTTTCGGCGTTATTATACACACTTATAACCATGT TATTCGCTTACCTCTCTGCTTTGTTGCTTTTTGCTAAACGAGTCCTTTGT ActgttttaaaagtttctcCTCATATCTAAAAAGGACTTCAGGGATTTCA CATTATATTTCACGCAGTAATCAGTACCTTGAAAACTTGTTAATCATTTT TATTATTCAGGGGAAGGATTTCTTCATGAAGTACAAAGGAACGTTTGTGA TTTTCCCTCTCTTCAAACTCACAAATAAGGTATATATTtctctttttgct ttttctttaaTTAAAAGTTTCTTGTAATTCCTCGTCTTTCATAGATGATG ACAATGAACCTATATACTGTTGTCTTCTTTTTCTGGAGCTGGACTAGCAA GTATTCTAACTAGGGTAGttatatatttcattttttaggtGAATTTGATG AATTCGTTGGATATTCTTATGATTTTATCAACAGACTCGCGTAAGCAATA ACGTATATATTGTTAATTCTTGCCTTCCCGCATCGAATGCCTTTAAACAT GTCATTCTTTTTCCCAACGATTTCCCATCAACTCCTGCCAATCTTTTTTC AAACGATTACATTTCAAATCACTTCCCTTAAAGTAAAGATTTACTTCTTC AGCTAATTGATATTTAGACATCCTGTGTACTTCGTTATAAAATACTGCTC TTTCCTTTTTTTGATTTCATACAACCAAAGCATGTTGTAGATTTATCTCC TCAACGATGAATTAGAATGATTTTTTGTCGATGATTAAAAAGCTTCATAT AAACAATGATGACAATCACCATTCAcacttctttatttttctacagCCTA TTTGCAACCGTTCTTGGAAAACCTTAGTACAATGGAATGGGTCCATTCTA TACTAACTATCATGAGAAGTAGTATGGGTGATGAAAATATGTTGGAAAAA TTGAGTCTTCTTTTACAGAGGTTATCCAGAATAAGGTATGACGTAATATT TATAGTTTCAAATTgcttagtctagcaagctagacgactaattcagtcat agtagaaataaagcaaaaaataatggagGGAAAAAAATCTAGTCAATTTT AGTTGACAAAATAcaaatacaaactaaatcccgtaacaataatcgtatta tcatataacacctatactactgtattacacgcattataaacgactccagt ctacaaaTTGCTAGGCTTTctctatttttttcatttttggtggaTTCTTT ATTGTTTATGGTCTTAACTTTGTTTTCTTCTCTACCaaaattactttagg cgtacaaactttcgcgagcagaaactttcgcgatttccGCGAATTccgcg aattttggcctttttcgcgaaagtaaatgtctttgaaaattcttaacagg gcaattcgcgaaagtttatgctcgcgaaaaattctcaaaaaaattggaaa tctataaaaccacgaaatcgtaataaatatcaaatttgcgGCATATTATT AtcttttaatgcctttttaaaaTCGAAGAGTCTTTGGTGGATTTAgggaa tgtttttcatttttaagacaatttttattcgaaaattctcATCTCTATCC aacaattcgcgaaagtttatgctcgtgaaagtttgtacgcctaaagtata atAATGTATATAATAGAAAAAATGCAGCTCTTGTAATATGAACCGGGCTT ATCAACAAGTTGTGATGTTGATGActcttcaaagattttttttgccCGTT CCTCCTCAGTTATCCTACGATACATGGCTTAAATTCTCCtactttttcaa taaaatccaaCAAAGCCGAGCGATTAACGCAGACACGATACATTATCTGG ACTGTTTCTTTCTTATTCCTCTGACACTATaaatttataaacatttaagA AATGGTGTTCTTGAAAGTCTCAATATCCTGAGGGGTTCCGAATCTCTGTT TCTAAGGGAATATCGTTCAATTTTCTTGATTTCCCTTTCATTTAGGAGCA ATAAAAGTATATTTGAAGCACTTCAGATGAAGAATGCAATGAGTGAAATA GCAAGGACAACCAACCCAACAAATGATTTTCTACAATTAAATTTACGCTC CATTCTGTTCAATCTTGACTCTATGAAAGTGGCTTACTAAAACAATAGAC AAAATCAacaaatagttttttatttaaagtatCAAGAATCTTAGAAAAGT TATACAAATGTTGTACATTACCTAATTAATTTATtgtaaattgaaaatta tttttaagttaaaaaatAGCATGTGTACGGTAACAAGATCATGAAGTATT ATTGGTA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00058974TCONS_00058974Clytia hemisphaericatranscript
TCONS_00058975TCONS_00058975Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00058974-proteinTCONS_00058974-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_315supercontigscaffold_315:371377..378133 +
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
CCDC138PREDICTED: coiled-coil domain-containing protein 138 isoform X2 Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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min expression (5.39 tpm) - - (41.6 tpm) max expressionaGrOo_1GrOo_2FGOo_1FGOo_2EG_1EG_2P1_1P1_2P2_1P2_2P3_1P3_2PoPr_1PoPr_2St_1St_2GO_1GO_2PH_1PH_2BMF_1BMF_2MMF_1MMF_2M_1M_2GEC_1GEC_2GEN_1GEN_2
Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
41.6 39.83 28.9 26.24 12.34 9.49 10.85 11.52 9.05 8.76 8.42 7.93 6.6 5.39 7.46 5.76 7.45 9.91 6.17 6.5 7.14 7.14 30.95 27.34 13.72 16.58 6.29 6.84 18.86 19.89