XLOC_037397 (gene) - C. hemisphaerica

Overview
NameXLOC_037397
Unique NameXLOC_037397
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_327:199936..209850+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_037397 ID=XLOC_037397|Name=XLOC_037397|organism=Clytia hemisphaerica|type=gene|length=9915bp|location=Sequence derived from alignment at scaffold_327:199936..209850+ (Clytia hemisphaerica)
atgtacaaacagtatgaagtaagcctgagtaagccctgaatactaaagTA
TCAACTtttaacgaacaaaacttgatttacaaacaggaatatctaaccaa
acgacgtttgatagcttgaacggtcaacttaatcttctttatgatgaacc
tatagtctgcggccgggtcaggaAATTTGTTTTTCACCCGGCTGGTTACC
ANTGAACCtatagtctgcggccgggtcaggaaatttttttttcacccggc
tggtttccggaaacactacatctttttattttcgcctaatcaaatataaa
atttgCGTATCATCTTTGTCTTTCAAATCAGGATTGGCTCCTTTGACCAA
CAaccatctgatgacgtcatgattgttTTATCATGCTGCATAATGCAATG
GTGTGTCTTTCCATTTGTTTTTCCATTGATCAACATTTCGATGGTTTGTT
GATCGAACCTTTCCAAATAGCGAGCATTTCCATTCAAATCAACATTATGG
AGAACTTCCTTACTTTATTAATTCTTGAATGCTAgctcatttttgaaaaa
agtcactATCGAGTGTGACACATTTTTCCTTTGTTTAATTTACAAGAAAT
CCCATATCGACAATCAAACTCAAACCTAACGAGTCTTTCACTCGTAAAAT
AAgacaatcaaataaaaaaaatcactttcattttttttcttataaaaaaa
ctcaaaattagcAATAGGGAATTTTATAAGAAGTTAGACGTGATTTAGAA
AGAACCTtgtaaaaacttaaaaaacacTCTGATACAGCCGATATACTGTA
TGCTTGTAAagacaagaaataaatcaaatattTAGCATTCAAGTTCTATC
tatttaaaatcataaaataaattataaataatTAACCGAAAACTTTTGAA
GATAATCGTGTTTTCTATTCATGTTTCCAAGAACATATAAATGTTCTGCA
ATAATCATTTAAGTCAGTTTTTCTGATcatatgaattaaaaaaagttatg
ttgATATACTTTTGAATGTTTAGATATAACAATTTGTTACAAAATATTAC
TAAGAATATTATACAACAGCGTACGAACAAGCACCAAAGATGACCAACAA
CCGCTCTTGTTGTCTAGACCTAAAGACAAAGATCGAAAATGTGGtgtttt
ctggaaatttttatttgttgccAGAATTTTGCTCCATTAAAGGTAAAATT
CCAAAGTGGATATTGAAACCACCTTTTTGTCATGTAAAGTTCACTTACCA
TCTTTGTCTTTCTTATCAGGATTGGTTCCTTTGAGAAACAAcaatctgat
gacgtcatgattgttTTTTTATGCTGCATAACGCAATGGTGTTTCTTTCC
ATTTGTTTCTTCCATCGATCaactttttgatggttttttgatCAAGCCTT
TCCACATAACAAACATTTCCATTCGAGCCAACATTAAAAACCATGTAATT
GCGAATAATGAAATtaagtaattaaaaatttgaaataaaatatttaaaat
ctaataATAACTAATCACCATTTTGTTTGTTCATTGATGAAACTTTCCAT
GTTTCTTCGTGGaaagtttccaaatagggaaCATATCTATGCCtatgaag
aaaatttaaactttacTTACCATCTTTGTCTTTCAATTCAGGATTGGCTC
CTTTGACCAACAaccatctgatgacgtcatgattgttTTTTCATGCTGCA
TAATGCAATGGTGTTTCTTTCCATTTGCTTCTTCCATTGATCAACATTTC
GATGGTTTTTTGATCAAGCCTTTCCACATAAGGAACATTACCATTTGAGC
CAACATTAAAAACCGTGTAATTGCGAATAATgaaattaagaaattaaaaa
tttgaaataaaatatttaaaatctaataATACCATGTTTCTTCATGGAAA
GTTTCCAAATAGCGTAAGCGAACATATCTATGCAtatgaagaaaatttaa
actttacTTACTATCTTTGTCATTCAATTCATGATTGGCTCCTTTGGTCA
ACAAgcatctgatgacgtcatgattgttGTTTCATGCTGCATAATGCAAT
GGTGTGTCTTTCCATTTGTTTCTTCCATTGATCAACATTTCGATGGTTTG
TTGATCGAACCTTTCTAAATAACGAACATTTCCATTTTAAACTAACATTA
TGAAGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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TCCTGACAAGCGAGCTGTTTACTACTCAGTGGTCAAGCTGTAACTGATTT
ATGTCTCTCATAGTTCCCTATTTAtactaaaattttttgatattttataa
tTAAACAATACAATCTTTTGTCCCATTGTTATTTAAGATGACAATGAGAA
GAATATAATAGATAATAATACAAGGGTAATAATGTGATTAATCGAATAAT
GCTTCCATCGTTCTTCATTTAATTCCTTTGTGAATTTTCCTCCAAATTTC
CGTTCTTGAATTTTTGTCCTTTTGATGACCTGCAATGGATGCAATTTAAA
TTAGGGTTTTAGAATATGTTCGTATAATTCATATGTTTATTTTCCACGGA
ATGTCGTGAATATAGACGGCTATATCTTCTTGGCATATTAAACAATTCCA
GTATTTACATATCAAGTTCCTTTTCGGTTTCTtgatttagtttttatttt
tagaccATTGTAGTTCGGTCTAGATTGGTTAGCATATTTTTTTCCGGGGA
TGATTATTAAATCTTCTCCGTCTTTGGGGTGATCCATTTCAAAGGTGATT
CTGGTTTCGGtttttgttggttgataatcTGGTATTCTTGTTACCCATTC
ATTTGCTATGTAGTAAACTTTACATATATTCTTTAGCCTGTCGTTTTCGT
CAGGTGAGCGTAGTACCCAATCgttgttttcgtttttcttttggCAGTCT
TCTCTTCTATCAAAAATGTTATAGAGGTCAAAGTAATCTCCATATTGGTC
AGCACTATCTTNTCgttgttttcgtttttcttttggCAGTCTTCTCTTCT
ATCAAAAATGTTATAGAGGTCAAAGTAATCTCCATATTGGTCAGCACTAT
CTTCTTCTCCTCGACAGCGATAAAGATATGTGGTGTCTTCTAGATAACCA
TCATCTCCACTGGCTCCTTTGAACATTCCTTTTCCTTCTTCTCCCAAATA
GATTTTTGGATTTATTCTCAAGAGTGAATCGGTAAAGATTCCGTCTGGAA
TAGAGGGGATGAGATTTCTTATGAGACTGCAGGTGGGTGCTTCACAAAAT
ATTTGTTGGAGTTTACTATTCCTTTCTCTGTGGAAGGATAGGGTTCCTTT
AGAGGCGTTGGGATGTGTAAGGTTGAAGGCAGTTTCTGTCCACTCTGACA
GGAATTCTcctttttttgtgaaagttcGTTCCAGGTTGTTACTGTTGTTA
GGTCCCAAGTAGGTGATAGTGTTTTGTTTTTCGTCATAATAATTGGGCGA
TCTGTTCAGGATTGTGTGAATTATGTTTAGTGGTAGATAGTGAGTGAACT
CGTATTGCATTTGGTTGCTGGTAAGGATTAcaattttcttgaaagtttGG
TTTTCATTGAAGTAGATTCTGAATAATATTATTCCTTTTCTGATTGGAAA
TGCTCGAATTCTTTCTGCTGTGTCAAAGTGTTCTTTTGGGATCACTCCTT
TTTCTTTTACGGTAGGTAACGTCAGTGTGGCGTTAGGCTTTCGTGGCCAT
TCGTCAGTCCAAATTAAATCTTTTCCTGTGATTTTAAAAGGCTGAAGGCT
CTTTACCTTTTTTAGCATCATTTTAAGGAAGTGGTGGAAGGCTTTTCCTT
TCCAATCACCTTCTTTTCGAGTGCAGTATGACATTTGGGTTTCTATCACT
TCGACTTTCATTTTGTCGTGATGTCTAACCAAGTGCTTTTCGATGATTTC
GTCTAATATCGCTTCCCTAGTATATGGCATTTGGGGATTTGATTTTTGGA
GCGACATTAACTTTCCTTTTACTAGTTGTCTTTGATAATATCGATTCTGG
TACTTTGCGTCGGCGTTTCTACTGATCGTTCTTGTTAGGCAGCTTAGTAT
TCTTGGTCCGAATATGTATATTGCCAGCACTGTTCCTCCTATTATAGCGA
TGGTAGTTAGCACAGCCTCTGCTGTTTTCCAGAAGCAGCTTAGGGAGTCG
TACCAGGCACATTCGTCTTTTTCAGTGTTCTTTTCTGGTTTTAAGGATCC
GTCTTTTATGTCGTTTCTTACATCATTGATTGCTTGTTTTCGGTCCTTGA
TTTCTGTGTTTATTTTGTGGTCCAGATGTTTTACGTCATGTTTAATGACC
TTGATATCTTGtgaattctggttgattttattttcatcactATTCAGTCT
TTTCTTTATTTGGTTTTGGGTTATGTTCAGTCTTGTGATGGAATGCGTGT
TTGCATCAATTCTTACGTCCAtggttttttctttttgtttaaggAGTTCT
TGTTCATTTTGGATTTTAGTTTGGTTTTTTTCTAACtcttggattttctt
ttcatctctttttcttttattcttttccAGATTCAGTTCTTTGGTTACGT
TGTTTAAGGTTTTCGTCAGGATCTTTTCCTGATCAATTATCTCCTGGTTT
TGCTCTTTCAGTTGTTTTGTTTCGTTTTGGACTTGTCctagtttttcttt
catttttaattctCTTGTTTTCCAGTAGTCCTGTCTGGTGGTCAGGTTTG
CTACTTTGTTTAGAATATTCTGGTAGTCATCCTGGAGGTCGTCCAAGTAT
TTGTTTGCCTGTTGTTGGTTCTGTCTGAGTTCGTTTTCAGATTTGGTCAG
GTTGTTATAGTCCTGGGTTAAGATTGCTTCGTTTTCTTCAATATTATTGA
TTCTTTTGGCTGCTTCTGCCCAGTTTTTTCTTAGTGTTTGTTGTTCTTTC
TCTAGCTCGTATGTTTTCAGATCTGTTTTTATCTGTCCATCTATTAAGCC
GGAGATGGTATTTCCTTCATATTGGACTGGGTTGAATTCGTCCGTAGTTT
GTCCCACATCCTTTTTTGTTAGTGTTTTGANTCTATTAAGCCGGAGATGG
TATTTCCTTCATATTGGACTGGGTTGAATTCGTCCGTAGTTTGTCCCACA
TCCTTTTTTGTTAGTGTTTTGactcaatcattttttagagaCATGGTTCG
AATCAAGGAGCTGTTTACTTCTTTTATTGTGTTGTTGTGGACTTGGAAAT
ATTCTTGTCCATTTTTGATGAAGTAATTGATAGGTGAGGTGATGGTAGGA
GATTGTTTTCGTAGCGTCCTTGTTCGAATGTCTAGAAACCATACTGGTTC
GTCTATGAGCCCTGGCCTTTTGATTTGTAGGCCTATTTCTAGTAACCGGT
TTAGTTTGAAATAAGGTGTTGTCTCCAGGCCATTATCCAACGTGTTCTGG
TTATTACCCTCCCCCTCTCCAGAGAAAGAAGGAACAAGGGTCGAGTCATA
GATTGTTATACACTAGACAAAAATCTTGTGTTATTTAAGTTCCATGAAGT
AAGAAATTATAAgatttgaaaataagaaaatgaaataatagatttaaaaa
attaacaatAACTTATCACCATGTTCAATCCAACTGTCCATTCATATTCT
GGGTTATCTGTTGCAAATTCTCGGCACGTTTGTCGCCGTTGGGCATATCC
ATTCCAACATAGATTCGATATTACGAATaataaaatcatgaaattgaaag
tttcaaataaaatattaaaaatctaaTAATAACTAATCACCATTTTGTTT
GTTCATTAATGAAACTTTCCATGCTTTCTTCATGGaaagtttccaaatag
ggaaCATATCTATGCCtatgaagaaaatttaaactttacTTACCATCTTT
GTCTTTCAATTCAGGATTAGCTCCTTTGACCAACAaccatctgatgacgt
catgattgttGTTTCATGCTGCATAATGCAATGGTGTGTCTTTCCATTTG
TTTCTTCCATTGATCAACATTTCGATGGTTTGTTGATCGAACCTTTCTAA
ATAACGAACATTTCCATTTTAAACTAACATTATGAAGANNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTCTTCATGGaaagtttc
caaatagggaaCATATCTATGCCtatgaagaaaatttaaactttacTTAC
CATCTTTGTCTTTCAATTCAGGATTAGCTCCTTTGACCAACAaccatctg
atgacgtcatgattgttGTTTCATGCTGCATAATGCAATGGTGTGTCTTT
CCATTTGTTTCTTCCATTGATCAACATTTCGATGGTTTGTTGATCGAACC
TTTCTAAATAACGAACATTTCCATTCAAACTATTATTATTGAGAACATCC
ttactttattaattttttaatgcTAGCTCATTTTTGAGAAAGTCACTATC
GGGTATGACACATTTTTCCTTTGTTTAATTTACAAGAAATCCCATACCGA
CAACCTAACTCAAAC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00059408TCONS_00059408Clytia hemisphaericatranscript
TCONS_00059409TCONS_00059409Clytia hemisphaericatranscript
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_327supercontigscaffold_327:199936..209850 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.35	0.5	0.69	0.88	1.54	0.61	0.52	0.65	0.4	0.72	0.33	0.15	0.28	0.32	0.23	0.44	0.49	0.32	0.17	0.47	0.41	0.99	0.2	0.65	0.39	0.43	0.86	0.56	0.2	0.47