XLOC_037456 (gene) - C. hemisphaerica

Overview
NameXLOC_037456
Unique NameXLOC_037456
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_329:64050..74065+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_037456 ID=XLOC_037456|Name=XLOC_037456|organism=Clytia hemisphaerica|type=gene|length=10016bp|location=Sequence derived from alignment at scaffold_329:64050..74065+ (Clytia hemisphaerica)
GGATTTCACAAATCACGGAATTAATGAAACACATGGTGAAACTAGGTACT
CAaagttttcaacatctcttTGTCAAAGTAAGTTCCATTTTTGTTATGAT
ATTCGAGGTGGCTTTCTCTTGGAGGGAAGTCTTTAGTTACCTTGCTTGCA
AAGGCTTGCAGATCTGgaattaaatattttcatcttgattttggCAAGAC
CCAGTGGCAGAGTGGATGAATTCACTCAGAAAATTTTATGTAAAATGGGT
GAAAGAAACAGCAAAAGTTTGTTATAATATCTTAAATTGATGATAAATGT
TTCTGCAgagaatttttatttaatttttagttAAGTTCCCTGGCCATGGT
CACAAATAACTTCTGTGACACTGTGTTTGCATTGTCCGAAAGACTGATAA
TTTTTCTTACTTATctgaatcttttgaaaaaatgaatttttttgtgaaaa
aattctttgagtgttgttaaaaaaaatatttttgttataaatggacgaaa
aaaaatttgaaattatgctttccctaattatcattaaaatgttctcaaca
gctgttaaccaagtaaaagaaaatctagcacaaaaatggctttaggttga
aaaataatcgcaatttagggtaatttcgagcatgttttgatgatatcact
caaaaacaggggtggtacctggaaatcttttctgaaaacagttactacca
aggtgtagtaactgtaaagggtggtggtcctgaaaaaaagtgttgaaaaa
agcacttactacacatcatgtcttgtagtaactgcgtgccccccccctgt
cagggaaaggattttgggtaGCGTGCTAAAGGAAAAAGTAAAGAAGTGAG
CGCTACGGTAAAGggtctttgattttttcctttgaATTTTTAATGGAATT
TCATTTTGTCATCAATGCCACAGCTAACTTTCAACATTCTGATATACCTA
Cccactaacggtcttttcccgttacgcgtggcgactttgaatatggacgt
TGCCCCTTTTGGGAAACGCATAccatgagtggtcctaaatctgacagccc
tgcctaaatccgaccccccccaaaaaactgctatgaaaaaaaattgccca
TAGTTAGGGAATTGTGCAAAAAACCAAACATAGgaagttttccaaatccc
ctatttcAATTAACCGACCGTGACCGCTTCATGCTTTGTTTAATTCTATT
GAATTTCTTTACCTCTTGCTTTAAAAATTATAGCGCAGTTCCAACCCCac
taaaattttactttagctGCTTGTAGAGGATTTTTATAATAGGtccattg
ttttgttgtttaaataaaaattctGCACATGcattatgaaagaaaaaatc
aacaaaaaaaaaatttttaacagaagagaaattgattttgtgttgtgttt
tgttttgttgtttttttgttgtatttatttttcatttcattttatgttGC
CGCCTTctgctttaatttttttgctccGAGGAAACCCCAATATTTAAAGC
ATGCTTTAATTTTTCAGTGTGACCTCCCCCCCCATAATTCAGTCTAAGTT
TGCACAAAGTttgaagttgaaaataaaaatattttgtttataatCAAGGG
ATGAGTTTTAAAAAGAAGTACTTGAAAAGTAATGGCACTTGGTAGAGCAC
TAATCAGGAAATGAGGAAGAATCTACAGAGCTTATTGTTTTTCCAGTGAG
TCCCTTGTCacaaaaagttcattttgattatattattaatatgccggaaa
tcgcagtttttgcagattttcatcggacttttccCTTATATtgcgttgtt
ttttcacacaaaaacattattaatagcaatgtccaccatcaagcatggtt
caattgtcaataaaactgatttttgaagctggaactttctaaaaatcgcc
agaacagccgattttcgccggaaaattggcatttcttgaatttctccagc
tgtacattatattttttcatgaaattttgcacactgatgcaaaatgacaa
tacctaaaatgtgacggagcccgacttctgattcttctgatttttttccg
gccgaaaatgccggaaatatgccggaaaacccgttttttttgtattttct
cgaATTTCCATCGTtatcttttctgattttttgcagaaagatgcatattc
gcaatgctcaaaatacAGTATGGCCGAgttcaatttttgagaaaaaattt
tttccggttgaaaatgccggaaatggccgtttttgcatattttcattgga
ttttttccttatatttctatgtttttcacacaaaacattatcttgataac
aatgctcaccatcaagcagcatcaagcatgattcaattgttcAATTGCGA
CATCCctttcccccatcaacaatcaatgatgaatttattgcgttatacat
tttcgctaaacgctatattttctgactgatatttttcatttttctcctcg
cattgctatctaactatGAAagtcaggtaggtccattcaacaTCTAGCTT
GTTATCACCTGGTTTGATTGTTTTGCAGGATAAATAATTAAACAAAACAG
AGCAAAAGTTGACTACAAACAACAACCAACATAATGCAACATGATGAGgt
ataatatattgtattaTCAATTTCCATACCTtactacttttatttttata
gtTGATCCATTTTTCAATAATCTAATCCCCactaaattgaaattattttc
tcacctcaatgttacttgtttcaaaaaaagtactcctttttttgtgtttt
ccatATATCGTTGCTGAAAAAAGCCTTTTGCATGTATTCTGGTTACAAGT
CTTGACTGCGCGGCTAAGGGTTAGTGTAAAttcatttccaaaatttcatt
tcaggtGATTTGGCAACTAATCAACAATGGAttttgttctttcaaagtaa
agtAAGTTGTTTAGTTTCCATAGTATTTTTTttgtgttgaacggtgaaaa
agaatgcggctattatattttgatttttcccataGTATCTTCTTGTATGT
ATATCTTATAAATCCATTCAAACACTTTTTTCTGTGTCATTGTCTTCATT
TTATTGATCAACTTCAGGATAAATCATCCAAACTAGTATTATCTGCCTCA
CCGTACAACTCTTTTTGGGGTGTCAAACAATAGCTGAATGGACAGGTAGA
AATCACTATTCTGTGGCCAATCcagattttttataagataatATCTGTGT
ATTCTCATGTCTTTTATCAACAGAACCGAGACGAAGACACTTTGTCAGAA
CGAGTATAATGTCTCTGGTCTATGTAACAGACAATCTTGTCCTCTAGCAA
ATAGCAGATATGCAACAATCAAAGAACATGATGGTAAGGCTTTTTATTAA
AGACATTTTGAGCATAACTCTGAATTTACAATTAAAACGACAAAACCAAA
AACTGTTTTATCTTTATCTCAAAGTATAGCTTGAGGTGCATTGAGATAAA
CCTTGGCCACGTACATAGAATGTTTGCCTCAAGTCTTTGCTTTGACTATA
TCTTATAAGACTGGATATCTTACTCAATTGGTTGctatcattttgaattt
tacttCCATTTACTTCCACAAGTAAGGATAACGTTGTTTATTTGCATCTC
CAATCTGTTCCAATGCAGTaaatatcaatcaaattttaagaaatgaGATT
TTGTTACTTCTCAACTCTTTTTTTTAGGTGNCTGTGTATTCTCATGTCTT
TTATCAACAGAACCGAGACGAAGACACTTTGTCAGAACGAGTATAATGTC
TCTGGTCTATGTAACAGACAATCTTGTCCTCTAGCAAATAGCAGATATGC
AACAATCAAAGAACATGATGGTAAGGCTTTTTATTAAAGACATTTTGAGG
ATAACTCTGAATTTACAATTAAAACGACAAAACCAAAAACTGTTTTGTCT
TTATCTCAAAGTATAACTTGAGGTGCATTGAGATAAACCTTGGCCACGTA
CATAGAATGTTTGCCTCAAGTCTTTGCTTTGACTATATCTTATAAGACTG
GATATCTTACTCAATTGGTTGctatcattttgaattttacttCCATTTAC
TTCCACAAGTAAGGATAACGTTGTTTATTTGCATCTCCAATCTGTTCCAA
TGCAGTaaatatcaatcaaattttaagaaatgaGATTTTGTTACTTCTCA
ACTCTTTTTTTAGGTGTATGTTACCTATACATGAAAACAATCGAACGAGC
TCACACACCTGCCAAACTGTGGGAAAAAATCAAGCTAAATCGAAATTATG
AAAAAGCTATGGAACAAATCGATAAACATTTACTGTATTGGCCAAGTTAT
TCCATCcataaatgtaaacaaaggtTCACAAGAATTACACAGGTAGCTTT
TCCTTTCTGAaagattattttttagaaagaagTAACCGGGATTCCAACAA
ATTACATGGTACTTGTTTTCAATAAACATCCTCATCATGATGAGATATAT
TTATATATCAAATGGTTTAAGAAAACTTTCTATACGCTTCAAATTCAAAT
GTGATCAGACAGAGGAATTATGAGTATGACATGAATTTCTGTATTGCTAA
TGTTTTGTTTGTGATTGTATTTTTTTAGTACCTTATACGGATGCGTAAAT
TGCGTCTCAAAACACAGTAAGTAATACATTATCAAAAACCTCAaaccttc
aaaataaaataaagaaatattagatttctttttcatttttactaGGCTGC
TCGCATCCTCTCTGTTTTATATTAGGGAATGcatatcaattttgaaataa
ttcgGTCCAAATTTTATCCctgtactttttttcttttttcccaaTATTGA
TTCTGCATCATTATTGTCAGGGTAAGAGTGCACCGATTGTGCATTTTTCC
AATAGAGTAGGAAGCATGAAGTTTTGTGTTAGTGCCGTGAATATTAGAAA
CATTTTAAGTATCTGACCATCTTGCGGAACAACTCGGTTGCTCCTTTTTT
TATGTTACTATACACAATTGCCCTCTTTTTGTTCTAACTTTTTCTGGATT
AGTATAAATGCAAGGATGGAGTAACTTTGAGTAACTCTCTAACAGGAGTT
CTATAAAATCTATTCAATACATTTCGGGGTTACATGCTGTAATCGAGCTT
TTTATATCTTTAATAGAAAGAAGCTAGTGACTGTCAGCAAAAAAGTAGAA
CGACGAGAAAAAACTCGAGAGGTAAACATACAAAACTTTTACTTGTACTG
TGACAAATAAGAGTAAacaattcttttcttttttaagactTAAAAGCGCT
GACACTTTTAATTGATATAAAATTAATTTAGTTAGCACGATTTAGTGTGT
ACTTTGCCTCTTTCACATCATTTTGGGAACAATAGATTCATTCAGCATAC
GCTCAGATTACTGTATGTTTACTGGTGTTTTTAACACCTATTATTAAATG
AGATTTTACACTACCTTTTCCACATTCCTCTATTTCAGGCGAAAGCTTTG
AACGCAGCACAAATTGAGAAGAATATCGAGAAAGAATTACTGGAAAGATT
AAAGAAGGGAACGGTAAGACCATGCTTGACCCATAGCGTGAATAAGAATT
ATAATAACAATAGCTACAGTTGACGCCCTCTGATTCGACGTTGTTCTATT
Ccattattcatagaattatatttcacaggtctatcgacctctacgaaata
attttagatttataaattgtctaattcttcatctgtcgtccagtcNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNttttgtttagcttcttcaaat
ggttgtttttcttgctttttgtcggttttttcgttcatgtttttgatttt
gctaaatttcaaccatttttgaagaactgctccatacgctccattattcg
ataatattgaaaggcACCGTCAACGAGAAACtttcataaacgacgctcta
ttaTTATTCGATACTCTCCcattcgatgaaaattcaatCGCCTTCTCGAA
TAAGAAAGCACGTCAACTGTATTTAAGAGAGCAATGTCAAAACACAAAGG
TCTGTGCTCAATTCAAGCTAACTAATAACGAATGAGGTGTAATATACTAT
ACtatgtttgtattgaaaagCATTCGTTTGGGCTTTTCCAGATAAAGTCC
CTACCCGGTCCACCAACCCACCCCCGTGTTTAGGAGGTCGGATCCCATAG
GGGGTGTACCAAATCTCAAAATAAGGGACTGGAGTTCCAGGGGCTCTCGA
AAAAATGAAGTTGTGGAATTCCAGGGGCTATCGTTCCAATAATGTTGGAA
TTCCATAGGGGTACAGCAGAAAAATTCGCCTCCTCAACAGAGAGACACCC
CTCTCTTTCAAACTTTAActggaaaaagcccaatgttGTCTCTAAGTTTG
TTATCAATACTGCAGTGAAAAAGAAGATTATGTAATAATTTTGGAGTCAT
TGCGTGATATCTTCGCTAAATTTTTGAATCATCGTTGACTCATTAGAGAT
TGTAGTTCGTAGACACTcaatataatatattttgaaatacgAGCGGAACA
AAGCTGTTTACCAAGGACGTGCACATTGGCACATAATTTTGTCTTCACAT
CGTTATTGTTTTGCTCGTTATTTCAAATCTTCGGGAAAGGTAGCAGCAGG
GTTTTGAGATGAAACTGTTCATTTATTATGTCAGTATGGAGGATCTGAGA
ACCCACCTGGAGTTTATTAATTATGTTAATTTACGTTATTTACATAATAA
GAAATAGGGTTATTAAAAACAGTGCCCTTCTTGGTCTCAtccattaaaat
caaaattctgACATATATATATAGAAAAGGTCTGGTGGAGATTTTGGtta
taaaataaatattgattAAGGTTTGTTTTAGCATGTACAAAATTTGAGAC
CAATAAAGTTTTCCTTACACAAACTTTTAGAAATTAACGCCCCTTAAAAC
TGGTACATTGTCAGAATTCCCCtccggaaaaaatttttgctcCGTTATTT
CAAGATTTGAACACCTTTAATCCGCCTCTGGCACTTACTGGTATTGTGTG
CCGAGAAACAACAtgccaaacaaacaaactataCGTGCTGTTTTTACATA
CAAAACCATCAATTAATTGATCAATGACGAAAATTATCAATATCCCGTAA
ATCTTCTTTTCTACTCatgcaaattttaaaaatactttttagaTTTCGTA
ATGTGAAAACCATAAGTTGATATTGAACCGTGGCAGTATGTTAACTAATA
TACGCATGTCAAAATGTCTCTACTTTAAAACCTTACCCCACGTCAGTGAT
AGAGTTATTTCCTCTCCTAAATTTTGCGCAtgtttccctgagtttcccaA
AGGTTTTAGGAAAAGACTTCCTTGCGTAAAAATATGGATATTTGTTACGG
TATTTTAAGgttcttttcaacttttaatttccgtgaaaattcaaattcat
tccGGGTGTCCTTTAATGATTATCTTTGGACTAGGCCTATTCAGTAGGCT
GAactgtttttagatttttgtgtTTATAACTTTCCAGAGATAAGTCTTAT
CCTGCTTCTTTCTTTAGTACGGAGATTTTTACAATTTCCAGAGACGGCTC
TTAATAAGGtgtttcttgtttttttctttagtaTGGAGATATCTACAACT
TCCCAGAGACAGCTTTCGATAAGGTGTTGGAGGACGAAGAGTTAGAATCG
GATCACGGCGAAatggaagatgaagatgaaattgAACAAGAGGTATAAAT
TATTCCTTTTTGTTtggtaatagaccttttcataaattacgttacgaaca
tcacttgcctcgtttgaAAATACTGCCatagtaatttatgaaaaggtcta
tttactTTTCTGTTTTatgaaacaaacattttttacGAAGCTAATTTTTT
CGTTTGACCTTCCTGTCTTTCCATTATCCTAGAGGTTTCAAAGCTCCAAT
TTTGCGAACTAAATCAATAGTTTCACATGCGTACGTGCTCATAAATCTAT
TTGAacgtctttattttctttttgatttagaTAGAAGAAGAATCAGAAGT
AAGTGTGACTTTCCCGCCAATCTTATCTTTGGTTGTAAACATTTCTATTG
GATTATGCTTCCCAAATGACCCTGGTATTGACTAGGACTTTTACCGTGGA
TCTCCAATCACTTTATTGTAAAAGGAAAATGATCCAGCAAAATTGATTTA
CCTTCAATTTTCAACCATTATTACTTATTACTGCTAAAGTCGATATGTCG
ATTCACTTGTTATTGTAGTCAAAAGGGCAAATCTCGACATCCAGGTCTTT
ATATGGCTAACCAGGCTTCTAAAAATTTTTGAGATTGACCCTTTAGCAGA
GCCTGGCCTACACGAAAAAGATGCATAAATCATTATTCAGATTTAAGGTT
AGATAAATGTCTATTGATTTGAGATTGGCCATTTTGCCCTTTTGTCAGCA
AATGGGGCTTTACTTTAAAATTCATTTGTTTTCGTTGATGGATTTTTTTA
GGAAGAAGCACCAGAATTTATCGCTGATGAAGACTTTGATTATGATGAAA
GTGATATGGAGGTAAAATGATATCCGCAATCAATTTTTCATTAACGttca
aatttatcatttttcaatatcattttttttCGCCGAGTCTATCATCTTCT
TTTACTGCCAAaaatatctttcttctttttttctcttggCGAATATCTAA
AAAAACACTGAGATAGACTTAGTTGTCCTTTGCTCATCTAGAAGGTACCT
TAAAGGGGAAAACTTACAGTAGCCGGGTAAAACTTTTCGTCTGGGAAAAC
TCCGTCCCTTTTGTGGAAATCTTTGTCACAATCTTCTTGTTGACCAGAAA
AAGTTCGGAAAAACTTCGCCGCTATTCCCCGAGCCCTTTTGAGACAAACA
ATACGAGATGGGAAGAAATAGAAGTCTTAGATGGTCTTTCTACCTTTGTC
ACTTCTTCCGCAACAGGATTACGGTTCGTTTTCATCGGAGagtgaaagtg
aagaagaaatcaaacaagaagaagagaaagaagaaaaagcaacatcttcc
aaacaaaagaaaaaacgaaagaaaatcgaaatcgaaTATGAGCGAGAAAC
CGTACCCAAATCAAAAGTCAAAGCAACACGCTAACGATCAAACAAAGGAT
ACCCataagtttttttattattttatattttttcttattaCTCTCTCGTG
ACCTAAGGGAAAGATTTAATAATTATTTTCGACAGAATTCTTAACGCCTT
CATATATATATACGTG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00059496TCONS_00059496Clytia hemisphaericatranscript
TCONS_00059497TCONS_00059497Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00059497-proteinTCONS_00059497-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_329supercontigscaffold_329:64050..74065 +
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
MAK16protein MAK16 homolog Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
176.13	172.39	61.53	47.49	63.93	53.2	61.98	67.88	72.28	53.42	92.66	98.5	148.74	176.4	122.65	107.19	76.38	105.82	125.54	105.8	109.43	97.8	160.48	155.52	77.37	81.54	62.49	99.43	68.77	83.64