XLOC_037816 (gene) - C. hemisphaerica

Overview
NameXLOC_037816
Unique NameXLOC_037816
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_334:325304..333033+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_037816 ID=XLOC_037816|Name=XLOC_037816|organism=Clytia hemisphaerica|type=gene|length=7730bp|location=Sequence derived from alignment at scaffold_334:325304..333033+ (Clytia hemisphaerica)
gaaaaaaaggaaccTTCTTCATGAGGTATTGTTAACTTTTTCACaattgc
ttgcttgtttttggTGGGTCCAGCCCAGGTCTAGAGGTCCCAAGCAAAAA
AATAGGTCCCCCTaaatattaaaagttttttaagcagCACCCAGTCCTAT
GTTAGTATAGACTATAGAATATTTGTTGATTTAATATCGTCCTTAGGAAA
ATCGAATCTCTATTCTTTTGCCATTATCAAAATCTTAACGTAAGATGTGT
AAAAAGATCTCTAATCTCGTAATTTGATTGCCAAATGTACAGTAATCAAA
TCTTAATTGAACGGTTGATGACCAGATAGTAAATATTTGATTGTATTCCA
TGTTCGTTTGCGTAGAGTAAAATGTAAAATGGCGAAAGAAGAAATCGATT
taggcaatttttttttgaacaattacaagatttgactataccTTATTATT
CCACGAAGCAATtcctttcaaataaaagatatgttgacaatgaatgggta
acctttctagaaatccaaacattaATTGCATAGCTACTTAAAGCATTTGT
AAGGTAGAGCCTCTTAAAGTTGATCGGATAAATTCTAGCATTtgctgttg
gctgatttagttgataatttttactgcaGAGGAAATCAACAAGTGGCACa
gtggtagggctgaaggcttgtttacaggcttcaggctggccatggcctct
ccccttgtgatttcttgtgtgGTACAAAATTATCTTAAGATCAGGCTCCA
ATCATGCAAATTCAAGTGATCGGCTTTTAGAGCAATCATAGTGCATATGT
AAGGTAGGGTCTCGTTTAAAGTTGATCGGATGAATTCTAGCattggctgt
tggctgatttagttgataatttttactgcggaggaaatcaacaagtggca
cagtggtagggctggctgaaggcttgtttacaggcttcgggctggccatg
gcctctccccttgtgatttcttgtgtgGTACAAAATTATCTCAAGATCAG
GCCCCAATCATGCAAATTCAAGTGATTGGCTTTTAGAGCAATCATAGTGC
ATATGTAAGGTTGGGTCTCGTTTAAAGTTGATCGGATGAATTCTAGCatt
ggctgttggctgatttagttgataatttttactgcggaggaaatcgacaa
gtggcacagtggtagggctgaaggcttgtttacaggcttcgggctggcca
tggcctctccccttgtgatttcttgtgtggtacaaaattatcttatgatc
aggctccaatcatgcaaattcaagtgatcggcttttagagcaatcatagt
gcatttgtaaggtagggtctcgtataaagttgatcagatgaattctagcg
ttggctgttggctgatttaattgataatttttactgcggaggaaatcgac
aagtggcacagtggtagggctgaaggcttgtTTACAGGCTTCAGGCCGGC
CATGTTCTCTCCCcttgtgatttcttgtgtgGTACATACTTATCTTAAGA
TCAGGCTCCAATCATGCAAATTCAAGTGGCCAGCAAAGATTTTCTCATTT
ACAAAAGTTATTTTCTTACACATTGTTCCACCCAGGTCAAATAGGATTTA
AgtaagtagaaaaaaaattaaatttgtcttGCCAAAATGAAAATCTTCGA
ATTTCCCAtactaatgaaaataaaagacaaaattctttctttttgaattc
tTATCAACTGGCAGTTTGTTTTTACAGGAGAAGAAAGCCAAGCTAATTCT
TCTGGGACATTGTTttataaaaactattttttgttttatatggataaaaa
agttgattctctatattaattattttcaacaaaaatgcaTTTCATTAAGA
AGTAACATTCNCACagtggtagggctgaaggcttgtttacaggcttcagg
ctggccatggcctctccccttgtgatttcttgtgtggtacaaaattattt
aaagaaattaaatttgtccTGCCTAAATGAAAATCTTCGAACTTACCATA
CTAATGATTATAAAGacaattctttctttttgaattctTATCAACTGGCA
GTTTGTTGTTACTGGATAAGAAAGCCAAGCTAATTCTTCTGGGACATTGT
TttataaaaactattttttgctttatatggataaaaaagttgattcaATA
TGTTAAttgttttcaacaaaaatgCATGTCATTAAGAAGTAACATTCTGA
TGATTTTAAAGTAAAGTAGGGGAAATAAAGTGGTGAAAGTTCCTTTGGAA
TGATGGGATACAGTATCATATCATATTGTAAGGATTAACAGTGTATTTAT
ATTGTGGTAGAAAAGAGTACATTTGTGTTATATTCTTGAACGTATTACTA
TTTATAATTAAATACCGTTGGCTAATcctgttttttttacttttctttag
aTATTTTACACAATGTGAAAGGGTGGTTGGGTGGACGAAACATAGTTGCA
TTCTGAAGAGtcaacttttgttttgaaatagtttttcaTGTTCAAACCCT
GAAATGGAACTGTGCGGCTTTTCTGCTTTTTCCCTCGTTATTGGCAATAT
ACTGGTACAATGAATTATCTTGTGACTGTGGTTGATGGTTTTATAACtgg
aaagattttttaatttttctgacAATAAAGTAAGTTTTTTTCATTATAAG
TCTACTCTTGCTAAGTAGAATTGTGATCACTTAGACTTGAAGACaaatga
acaatttttttttaggttAGATCAGGATTCCTTGACTTGCTAATCCAGTA
AACAGACTAAAGTAGCAGCCATAATATTATaacctttttatttaaatttt
ctttcttcagaCAGACTTAGAGGAGACCAACGAAGATGATTGGAGAACTT
GAATAGTTCTAAataatttttgacatttcagCACTTAAGTAACAGATTGa
aactttggaaaaaattttgaattgctTAGCTTATTGTAAAAATATACAGC
TTAAAGTTTTGATTTCGTATGTACAGCatctgaccccgagaatgtagtaa
accccgagaatgtaggtttctcatttttaagcattgtagccttaacgata
gttcaacttcatgaaaagttgtttcagggcatactgttacatattactta
ttatttctagacataaaattttaacttgaattaacTTTTTCCAACGGAAA
CCTGAATCGAAAttgattggatactacccgaattgggacatttttaaaat
cttctctaaatcgaaatctattggaattaagttatgatgatagggtattt
tcttattcctaatgaactaaggaaacGGGGGGAAATAGTCCATTTccata
tttattgttctaagttagatattttgacgaaaatgtttaacctacctttt
ggggttagttgacctacaatttgggggGAGGGGGCCTTCATAACctgaca
taaaaagtctgtcaaattatataaaacttgtttgttgtactttcatcACA
TGAATCTGNtcataacccgacataaaaagtctgtcaaattatataaaact
tgtttgttgAAGTACAACATGACATGAATCATAAGCCTTATCCACTAAAT
CTAAAGATAGTACGTATTTCATATaaacatggaattattatagacactgg
aaaaacaacgggctgattttttccaatttctcatgtacaagccttgtccg
ctTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNcattaaatgatttttcgtagcattttaattgtatt
tctcatcaaaatacacttatccaattcccaaatgagactttaagttctcc
ttcgagattcaaactcatctagGTAATTACTTATTAAACGTCGTTAAGAC
GTTTTCAAtttcgagaaagatgcaaaaacatgctatgtaccttaagagaa
ctaaattttgcggtttttgctgatttaggcccaaaccgtaaaataaaatt
cccgcaaaatttttcaaatgcgaaaaacaaaggtcgaataattcacagta
cggctctaattttctttcaagtgagaaatccgcaaaattaagttcccgca
aatattaaatcttaaactgcgaaccgcaaaaaattgttcccttaaggtac
tttaatcgtagaaattttagcgagactaattttagcgtatattagcgagt
cgtgaaaatcttgatttttttttaatttattttagcgaatcaagatttca
aaaaatttcgcgcggataaattttagcgaatactcgtattacattattga
ctgagttcgttttctagcatttctttgcactgaaacccttcctgttgata
aaaatatatcaaggcaatataaccagaaatttcgcgtggataaattttag
agatctgtcgattcggcatgttttagcgagatttattttaacgaaaatag
ggaaaactcgctcaaacgctaaaattagtctcgctaaaattttaaattaa
agtACAAGAAATTGtatattgacaccagaaatttttaaacttcaacctca
aaacgAACGATCATCAAACGAACACTTAACTTAAAGGTAGAAATTTCTGC
GACTTTGGCCATAATTCGCGAAATCTTCTTAGGCAAAATTAATATCGAGC
AggcaattcgcgaaaattaattgatttcattcaatttttcagtcGTCAGA
GATAGAAAGTGCTTACAATGATCTGTAGTCAAAGTGTTTCGATCTTTTTT
ATTGCAAAGCGCATATTTGAAATGgttgatttttatttaatttgtggtaa
tttcttccgcgaaacgCGCAATTTTGGAGAGCTTAATTTGCGAAAATTTC
TTGTCCGTAGTAAtatcttcccttaaggtaatcttTTTTGTGGGTCATCC
GGTATGTCATTGTCTGTTGTCAATGATTACAGTCCCAACACTTGTAGTTA
TTATTTGAGATTATGTCGCTACTTGGAAATTACGTAcataaaatttattt
caaactttctaaTTAGGTACAAAGGAGGCGTCGTCTTGCGGGCACAAAAT
TGGAAGATGCATCGGTGAGtcgtaaccccccccccccgatttttcgtttt
tattgcagtaactgaaaaaaatcacatgGGGTTCTAGCAAAGCCCAGCAA
GACTTTCTTGAAtgtaaaaatattaaagaaCTTTTGTTCATGTCACGCCT
GATTAGAATCTTTTCAACTCAGGAATACTTTAATAGGATAAGGGAGCTTC
GCGAAAGTTTcactttttcgcgaaagtttatctcgAAATTCTGCaacttt
tccatttttccaattcctaatttctcgacctctgAAGCTATTGAGCtagc
ctggttaaccaagccagtttttacaagGCCACGATACGGCTAAAGGCAAT
TATGTATAGCGTTATCGGTGCTGTAACtatttttatgatgtacggaattt
taagtttgccttgaaaaactGGCTAGAGCGAATCGTACGTTTATAAAATG
AACGGAGAAGTCGGCGAGACTTCTTTGAAAACGCTTTTCACTTCTCAacg
aaaaactttttgaaggtATTTTTGTATCTGGGACCTCATGCCACTAAatg
ttttccctttttttagaaaaagcttACAAAGAGTTTCTGATGCAGGTCAA
TGAGCACCAACAAAATGATACTTCCGATGCAGCCCTCGGCTTCTGGGTGC
GAAACTTTGGTTTACAGCCCCCAAGAAAAAGAAGCCACAATCAAGGAAAA
CTTACTAGGAGATGattataaaataaatatatgaTAAAATCGTgactaaa
tttctttttgtctcAAGCTCAAAACTTTAA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00060103TCONS_00060103Clytia hemisphaericatranscript
TCONS_00060104TCONS_00060104Clytia hemisphaericatranscript
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_334supercontigscaffold_334:325304..333033 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
2.44	2.48	0.28	0.5	44.16	49.31	71.35	78.67	119.57	80.54	77.11	64.81	69.68	102.4	77.3	60.77	115.8	82.48	90.27	78.47	68.64	53.35	38.94	34.78	42.41	47.79	50.46	53.58	56.7	31.78