XLOC_038551 (gene) - C. hemisphaerica

Overview
NameXLOC_038551
Unique NameXLOC_038551
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_358:672221..682461-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_038551 ID=XLOC_038551|Name=XLOC_038551|organism=Clytia hemisphaerica|type=gene|length=10241bp|location=Sequence derived from alignment at scaffold_358:672221..682461- (Clytia hemisphaerica)
TGGAGCAAGACGGTCATACCCGAAAAAGTCACGACTGGTCAACTTTTAAT ATCCCTGCCCAACAACGTCAACCATCAACAGCTCAAGATTTCGAGACACA GACACAGATATCAACATAACAAACTAACAAAGACATTTTTGTCTTTTCTA CCTTCCTTTATCAGATTACTCAGAGAAGTTCTTTTCTTCAAAAGATACAA GTATGGATGCATTCGACCAAGATGTTGACGTTGATAACATCGGCGATTTT GAGAATGAAAGAGCTCGCAATATTTTGCAAAATTACGAGTTCATGAAAGC CTGTGGTAAGAAATAATAACATAAGCTAGAATTTCAATGTAATTGAATCA ATGTTTTGGCTGGGGGGCCACTAGTCTCAGTTTTAATAACCATTTGTTGG ATAAACCAGTGTGGAAACGATGCAAAGTTCACGCTGAATTGTTATTTGAT TAAAGTGAGGTACACGCCAAAGCAAAGGAAGTTCGGCTTGCGCAAAAGCG GCCGAAATTGCAGGGGGGTAATTCCCCCAATGGATCTAGGGCTGAGCCCT GGTGGGGGTTCAGGGGACAAAGCCCCCGAAAGCCCTGAGATTTTGATCTT CTTATGCCTAAAAGTTGCTCAAAATTTGTAGAAAAAGAGCTTGAATTGCT GGTACTTCTAAGAAAGACTTTTAATATGACGGTCAAGGGAGAGCGAGGTG GATACTTTTAAACCTGGCGTAATGAAATTGGGCGTTAGAACAGCCAGACG ATCTCAATAGAACGGAATCGACAATCGAACCAAATCGAACACAATCGACC CATTGAAATTTGATTGTCGAACGCAATCGAATCTCAATGGAACGTCAAAA TTCTGGGTAATATTCGATTGGTTTGATTGTTGTTCGACTGGTTCGATCGT CGATTCCGTTCGATTGAGATCGTCTGGCTTNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNTAATATTCGATTGAGATTCGAT TGCGTTCGACAATCGTATTTCAATCGGTCGATTGCGTTCGATTTGGTTCG ACTGGTTCGATCGTCGATTCCGTTCAATTGAGATCGTCTGGGAATAGCAG TGCCAGGGGGGGTTGGTACTAAAATCTCAGACATCATGACATTTAGTGAC GTGGTGGTACTGCAAAAAAGCTCAAAAAGAATTTTAGTACCATGTGTACT AAAATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGCAT GCTGTTCACTAATTCCAGCCTGGTGGATAAAGTCTAAAGAGAAAAGTAAA TTTTGTCGTAATTTTTTAAGGCAATGTCATACGTATTGATAGTAATTGTT AGTAATTTGAAGTTGGTGCTGTGCATTTTTATTAAGATATTTTGAAAAAA CNCTCTTAGCAGGGATTTTATTTCCATAATGGCGGACATAGATGCGCATC CCAGACCCAAATGATTTTGATTTCCCTGGAGTATCTCCAGAATACTATCA CTGTGAAAAAAATTTCAGTCAGCATTTTAAAACTCAGTTTGTAGAAGCTT GCCTTGAAGAATGCTATTTTTTGATAAATATGATTTTATTTTGCGAAAAA GTGATTTTTGAAGACGCCATTATGAATTTTTGAAAAAAGTGAAAAACTTG AAATTCATTTCGTCTAAAGACTTTTTTGAAGACTTCCATCTCTGAAAATT TCAGACATGTGATTTAATCAGTTTAAAGTTTATGAACTTGCAAAATTGGC CTTAAAAAGCATTTTGCTTCCCAAAATTGGNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNCAAATGAAAAAAATAAGATTTCCA ATAGTTTTGACATATTTACAGGCCTGAAAAGACCAGAAAATGCCATTTTT TCCAATTTTTGCCTGTAGTGCGAATCAGTACCCCCAGGGGGGTTCGGCTA ATTTTGGACTTCCTCACAATAGGTTAAATTTTCATAAAAAAACACTACAA CTTGAATTCTCTGACTTTGACATTTGACGCCCCACCCTAGTTGAAGCTTA ATTTGCAAAAAGAGGTTCTTAACGTTCCCGATTTTCTGAATTCACTAGAA AGCTTGGCATTAATCACTCATTCTAGTTGTCATTGTGTTATCAGCTACTC GCTTTACTGTTACTGATCTGATGAGGTGTTGCTCTGTGCTGGATTTCTTA GATCAAAACAGGGGTTGGATTTAGAGAATAATATGATAATTACATAATTA CTGCGATCAATTTTCTTGTTTTGAAAGTGTGTACTCTGTCGTGCGTTATG GATTTTTTCAAGCACAAATTTCAAGCCGAAACATCACAAGCCGAATGAAA TTACTTTTGATTTCCCGTAGAAATTATGCGATGAACAATCCGGGGGACAA TGAATCGACGATCGAACGCAATCGAACATCAATCGAAAGCAATCGAATAT CAATCGAATCTGAAAATTACGGTTTTATTCGATTGAGATTCAATTGCGTT CGACAATCGAATTTCGATCGGTCGATTGCGTTCGATTTGGTTCGACTGGT TCGATCGTCGATTCCGTTCGATTGAGATCGTCTGGTTATTATAATACCTT TCATAAGATGTTTTGTTAGTTTATAACCTTAGTGTCAAAATGCATATGTT TTGCATCTTTTCCAGCTGTATTTTTGCAGGTTTTTTACCGACTTGAATAC CCTCCCATTCTGACAGTCATTATTGTCATATTTTGAAATCAAATTTGAAC CCTATCTGATTGCTTTTTTCTGGTGTTTTTTCTCAATAAGGGGTGCAAAG TTGCCAAACTTGGAAACTTTCTTCTTTGCCCTAATTTTGATTGAGTCATC GGGCTGCTGATATTGTCAATTAAACACGACATATTAACTATTATTAATTG TCAGGTCTTCCAGTTAAACAACCAGTATTTGGAAAGAAAGTTGAGAAGAT TGAAGTTGAAGATCGATTTGCATATCTTAGTGATGAAGATCATTCTGATG ACAACAAAGATGATGAAGACTGGTCTCCTTCAAAAGAAATCCAACAGAAA CCAGTTCCAAGTAAACAACAACTGAGTGAAGGTCAGGATTCAGGAATTTT TATTACACTTTAGAATTTAGAACTTACTTAGAAAGTCTGAAGAGATTTGA AGTGCGACCTTCAGTATACTTGATAGAAATAAGTAGAAACAATCTCACCA TAGTTTGCAGAGGGGTGTGAACACCCCAAGGTTTATTTTGTCCCCTATAT ATACCTATCCCCCTCTGTAATGAAACCTTACCCCTTTTTTTGCAGAAAAT CTAAACTCGCTCTATGCGCTACTAAAGTGATCAAAGAGTACAAAATGTAT ACAGTCAAGAGTCAAAAATTTCACAATATGAAAATATTATAACGTTTTTT AATAACAAAATAACACTTTCGTGTTTTGATGGTACTATTTTTACTTAAAA GCAGACTGTGACAATTTGTTACTCCATAGTAGATCAAAATTTCCAAATCC CTTTCTTATTTGATTCCCATCCCCCCTAATTTATGATGTTAATATTTTTT TTCTCCTTTGTTTACAGATACAAAGAAACGTAAGCCTAGAAGAACCAAAC AAGTAAAAGTAAGTCAAAGTTGTGCACATTGTAATTTCTATGGTATTTTG TGAGTAGACTTCCTGATACAGGTAAAAAGGACAAAAAACAAGAAATTATT ATATTAGAGGTTTTTTTTCTTGTGTGCTTAATTGTACGTAATAAGCAGGT GGGTGGGTACTTCAAATAAAAATCTACAAATTTGGGGGGGGTCATAATTA AGTGCTATTGACCTGATTTTTCTAAAAATCCCTAGGAAAATGAAGGTTTT GGCCAATTTTGGCACTTTGTAGCACAAAGGTTATCAAATGGGGGGGGGTC ATTTCAAAAATTGCAAAATGACCCGAAAATAAAGCTGCATGAAAATTAAA GGGTATCATACGCCATGAAAGGCTTTCAACCTTTATTTTTGTTGTTTTTC TATGCTGCTGTTTTATCTATTACACTTTTTTTATAAGAAAAATGAGGCTC AAAAATGCCAAAAAATAAGAACAATTTAAGAGCAGTGGAGAGACTGAAAG TATTTTAAAAAGTAACGTTTTTTTTTTGTTATAGTTATAGCAAAAAGAAT CACTGGTTTCTAAAATCCTCTAAATAGTGGAGTAAATAGCCAAAACTTGT TTTTTACCTTAGAACAAAATAAGAACAATTCAAGGCTCAAAGTGCCAAAA AGATAAGAACAGCCGAGCCTCAGCAAAAATTTACTGGTTCTTATAAAAAA AAAAGTGTATGGACTAAATTTCATAATGACAATGATAATAGAGATTTTGA GTATCAAATGTCTACATTCGTTTTCTATGAAAAACATCATCAATTTAGGA AACAAGCAGTTCTATCAAGAAACAGCCAAACAAGGATCCAATTCGCAATC GTGAAAGAAATGAGATCGTTGAAAACAAACCCATCCCTGAAGACCCAAAA CCATCATCATCAAGTCGATATCCAAAACGTGGTGGAGCAAGAAAATGTTA TAAAGAACAACAAGTCCCCGATGAAGACCATTTCTTGTGTATGTTTTCAA GTAAATTAGGTCAACGTTAAAATTTTGTTTCTGCGGAAAAGCATCCATAT TAAAATTACATACACGTTGAATGTGCAATGAAAATTTGAAAATTCTATTT CTGTTGGGGTCATGAATTTATTCTCTGACCCAGATATTTTGACTTGGAGA CTTTTTTTATTCCAGATTGTGAGCAATGTGAGGATTTTTATTTCGGAGAT TGCCCAGTTCATGGTCCTTTGTTTCCGTTAGCTGATAAAGATTGTCCTAA CACCGAAAATCGCAGTTTAGCCAGTCTTCCTGATGGTTTGGAAGTCAGAG AATCGAATATCCCTGGTGCTGGACTCGGTGTCTTTGCTAAACGCCAGTTC AACTCTGGTACACGATTTGGTCCTTACGAGGGAAAGAAAGTTCGACCTGA TATTCCCAAAGATGATATGGATACATCATACATGTGGGAGGTAAAAGCTT CTATGTCTCAATATTGTACTCTAGTTTGGGTACCAATTATTGCCGACTGG TTTCCCGTGCATTGCAGAAGGAAAAGCCGTCAATCAAAAATGGATCAATG ATTTCATACTTCAAACATCCAGTTTGGGTAAATTTTCGTCGGCAGAAGGA AAAGCCGATCAACAGTGGATCAATGATTTCATACTTAAATTTTTCTTCAA ACTGTATACTGGGCCTAGATGGCTAAACTTTGGCTTTTATAATAGGATAA ACTTTCGCGGGGATTAAATTTCGCGGATTTCGTGTATTTGGGTGTCATCT GCGAAAATCCGCGAAATTAAGTCCCAATGGAAATTTGGAAGGGCCTCGTC CGCGAAATTTTTCTAAACTAAATTTAAAATATGTCAAACAAATACTTTTT GAATGTTTACTGGCATCAAAGAAGCGCTAATAATGTGTATTTCAACAACC AAAATGCATGATTTAACAGTATAAGTCACAAAATTGTGAAAATATTGCCA CCCAATAGTGCCACCCGCGAAATTAAGTCCCTGCGAAATTTTTGAATTTC GCGGATAGACCCAACTGCGAAATTTAATCCCCGCGAAAGTTTATCCCATT AAAGTAAGTTGATTGAAGAAAAAAATAGTACTTTTGAGAACATTTCGATT CTGAAGGCTTTCATTGAACATTTAGAACACATAACATTAACAAGAGTTAG AAATATGATCGTTATGTATATGTTTCATATCTATATTTGAAGAATCTTAG AGCTTTTTCATGAAAATTTTACTGACTGAGTTTCTATTTTCTGTTGGAGC TTTGAACATCGTTAGATTTCGAACGCGATCATTACAGTAACTACATGCAT CGCGAGGCCTAATTCTGACACAATCAAGTCCCTACTTGATTAAGTTGCGA AATATTCCTGTGTTGGTACTGATGATTTAAAATTAGGTCAGCTTCAGTTT ATTGAGATTGGTTTTTTAAATATTTTATATATTTTCAGATCATGAAGGAA GGACGAGTTGTTTATTACGTTAATGGCAAAGATGAGAAATACGGAAACTG GTTGAGATACATCAACTGTTCAAGAACTGAATCAGAACAGAATCTCGTTG CTTTCCAATACCATGGTCAGATCTATTACAGGGCTTACAAAGAGGTCAAA ATTGGCGATGAGCTTTTGGTTTGGTATGGTGATGAATACGCCAGAGACCT TGGTATCGTTGCTGCGGATATGAAGGATGATGAAAATGATAGCACGGCGA AACAAAATGATTTTTCACAAAAGAAAGATATTGGTTAGTCATAATTTTAA TCCCTTTTAACTTCAGTACCTTAAGTGGATTAAAATAATTGGCGCGGGTA TTGGCGATTTTTGCGAATTTAACCCTTTTCGCGAAATTTAGTCCTCGTAA TTTGGCCAAAACCCCTAGGAAAACAAAAAGGAAATTCGGTGAAAAAGAGG CTGATTCGTGAGCATTAGTTCATGCGAAAATTTACCCACTTAAGGTAGAT GTTTCTTTTCTTTAAAATTGTTGTAAAATAACACAAAACGAAACTTAGCT TGCTGTTTATCATTATAAATTATAGATTAGTTAAGTTTTCTGTATGGTTA TCAAGACATTCTAGATCAGTTTACCCAGCGTAAACGCTTTTTGCTCATTC TGTTGGCCATTCTTTTTAAGATACTTACTTTAATGGGATAAATTTTCGCG GGTTCGCAGTTGAGCTTAATTACGCGGGGACTTGATTTCCCGAATGGCAT TATCGGGAGACAATATTTTAATGATTTTGCGTCTCTTTACTGCCAAATTA TAAACACTTATTGTTGAAATACTATTATCCGCGACATTTAATCCACGCGA AAATTTATCCCATTTATAAAGTACTATTCATGATCAGATCAAGTTTATGG TTCTTTAGACGGTTTACGGTTGACGAATTTTTATTTTTATTTTGGTAAGA TTTCTTTTTAATTATCTTTCTTTCAGGTCCAATCTTCACATGCAGATACT GTTCCATATCGTACTGTCATGATAAATATCTACAAAAACATTTGAAATTT TGTCGAAAACTTCCTATAGAGTCTTCATATAAATCAAATGAAGCAGACTC GAAATTAAAACAGAAACACGTTCGAACCAATGATGTGAAAGTGAGAAGAA AAGGAAAGACGAATGATGGAAATGATGCTAATATAAGTAGTAATAAACCA TTTGTATGTACTGTGTGTGGAAAAGTTTCTAATAGTTTTAGTAATTTACA AACACATCTTCGTACNCGGCTATTAGGTACCCGAGAGTACACACTTGTTG CTGAAATACTAAAATCCGCGAAATTTAATTCACGCGAAAATCTATCCCAT TAAAGCTGATTACTATTCATGATCAGATCATGAATTTATCAGATCAAGTT TATGAATCTGTAGAAGGTTGACGGTTGACGAAAATTTTTTATTTATTTTG GTAAGATTTCTTTTTAATTATCTTTCTTTCAGGTCCAATCTTCACATGCA GATACTGTTCCATATCGTACTGTCATGATAAATATCTACAAAAACATTTG AAATTTTGTCGAAAACTTCCTATAGAGTCTTCATATAAATCAAATGAAGC AGACTCGAAATTAAAACTGAAACACGTTCGAACCAATGATGTGAAAGTGA GAAGAAAAGGAAAGACGAATGATGGAAATGATGCTAATATAAGTAGTAAT AAACCATTTGTATGTACTGTGTGTGGAAAAGTTTCTAATAGTTTTAGTAA TTTACAAACACATCTTCGTACTCATACTGGTGAAAAACCGTACAAATGTG ATATTTGTGGAAAGGGATTTAATGTTTCATGTAATTTACAAAGACATCTT CGTACTCATACTGGTGATAAACCGTACAAATGTGATATTTGTGGAAAGGG TTCTAATAGTTCTTGTGATTTGACAAAACATCTTCGTACTCATACTGGTG AAAAACCGTATAAGTGTGATACTTGTGGAAAAGGATTTAATCATAATCAG AATTTACAAGCACATCTTCGTACTCATACTGGTGAAAAACCGTACAAATG TGATTTTTGTGGAAAAGGATTTAATCAATCAAGTCATTTACAAAAACATC TTCGTACTCATAATGGTGAAAAACCGTACAAATGTGAAATTTGTGGAAAA GGATTTAATCAGACTCCGCATTTACAAAAACATCTTCGTACTCATAATGG TGAAAAACCGTACAAATGTGATACTTGTGGAAAAAGATTTAATCAGACTC CGCATTTACAAACACATCTTCGTACTCATACTGGTGAAAAACCGTACAAA TGTGAAATTTGTGGAAAAAGATTTAATCAGACTCCGCATTTACAAACACA TCTTCGTACTCATACTGGTGAAAAACCGTACAAATGTGATATTTGTGGAA AAGGATTTATTCAATCAGGTGATTTGACAAAACATCTTCGTACTCATACT GGTGAAAAACCGTACAAATGTGATATTTGTGGAAAAAAATTTAATGATTC AAGCTATTTACAAAGACATTTTCGTTCTCATACTGGTGAAAAACTACAAA TGTGATATTTGTGGAAAAGTTTCGAATAGTTCTGGTGATTTGTCAAAACA CATCTTCGTACTCATACTAGTGAAAAACCTTACAAGTGTGATATTTGTGG AAAAGCATTTAGCGTTCCGTCTGATTTAAAAAGACACCACCGCACCCATT CTAACGAACAAGTATAATACTGCAATGACCATTGGGTTTAAAGCCCGAAC GGCTGGAGAGGAATCTTCAATCTTTCTCAAGCAAGAAAAAGTGAAATCTT GAGATTTGTGCTGCTTTTTGAATGAATGAATTTAGCGCCTTCCTTGTTTT CGAAATCTTGCGATAGCTTTTACTTTTAATCCAGCGTTTGTGTGATGGGA AATAAGTAGTTTCATTTTCAATCGAAGATTTTTATCTCTAGTCCATTCAG GGAGGACTGAAAGGCCATTGTGATAAATATGTAATAGTTATTGCATTGTA ACTGGTCTATTGTACTTAAAATATGTGATAACTGGTTTTTCGTCAACTTT TGGAGAGATTTAAAAACTTCTCTGTATTCATATATGGTCTCATTTTTATA TAATTTTTCTATGTTATTTTTTCGCAGACCTCTATAGATCATAGATATAC TTCCTATAAGAAGCTTTTTTTTGCTAGAGGATGATCAGAAGCCTATTTTT CTCTGGCTTTCTTTATTTTGATAATCATAAAAACCTTCGAAAAATAATCG AATGGTCATTAAAGAAACACTTGTATGTTTGCTGAGAATAAAAAGAAACC TTTGCGGGCTATGTTGGTCCTAATGTTGAACATGGTCTCGTACCTCACAT TTGAAATATGATTTACGGGGAATGTCACTTCTCTTAGCCATTTAGATGCT AATACAGTGAAGTCTCCGTAACTCGAACACGCATGGGGAACACAATTATG TTCGAATTGTTGAGGAAATTTTGAGTTATGAAGTAAGGTTTTAAAACTAG CTCGAGTTAAGGAGACATTCGAGACTCCAATCAAAAAGGAAAATTTGAGT ATATTTGCTTCTCAGGGTTTTTTTCGCGAGCGTAAATTTTCGCGAAATGC CTTTTCAAGAATTTTCAAAATCACATTTACTTTCTTTTTTG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00061463TCONS_00061463Clytia hemisphaericatranscript
TCONS_00061462TCONS_00061462Clytia hemisphaericatranscript
TCONS_00061461TCONS_00061461Clytia hemisphaericatranscript
TCONS_00061460TCONS_00061460Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00061461-proteinTCONS_00061461-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_358supercontigscaffold_358:672221..682461 -
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
PRDM9histone-lysine N-methyltransferase PRDM9 Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
7.73 7.55 4.33 4.59 0.62 0.46 0.38 0.33 0.4 0.34 0.24 0.29 0.31 0.51 0.94 1.03 0.99 1.58 0.72 0.51 1.01 0.93 7.15 7.17 6.45 6.85 0.83 0.7 4.17 4.53