XLOC_038683 (gene) - C. hemisphaerica

Overview
NameXLOC_038683
Unique NameXLOC_038683
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_36:1336801..1341472-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_038683 ID=XLOC_038683|Name=XLOC_038683|organism=Clytia hemisphaerica|type=gene|length=4672bp|location=Sequence derived from alignment at scaffold_36:1336801..1341472- (Clytia hemisphaerica)
ATGGAATCAAAACTGGTCAGAACCATTTCATTGCTGGTCATTTCAATCTT TTGCGTGATTACTTCAATATCGGCACTGGCTATAAACGAAAGCGTTGGGC AAACAGTTAAAGACAGTTCAATTCGAACTAGAATTCCAACTGAGATACTG ATAACAACTTCAATGATGTCAAGCAGTAGCCAGACAATATCAGATTTACC ATATTCGGCTGATTCCAATACCATGGAGGATTCTTTGACGTCTTCATCCC TATTCACATTATTCACAACCTCTCAATATCACCAAACAGTTTCACTTGAC TCCTCGACGACCTCGACAGATCCATCACCAACAACTAACACATGGTCAAT TCAACCATCAGTATACGAAATGCAAGTCCAACCATCGTCCAATATTAAAA CCAAAGGACTACATGAACAAACTGTGCATCCAGGTTACCATGATGCGATA GGCCTTACAACAAAATCAATCGCTACAGAAGGCATTTTGTCTGCGTCTAT AACCAGCCAGTTTAGTACTTTGACCAGAACTACAACAGAGCATTCTAGAG CTACAGGAGATTCTATTAGAAATATGTCAATGTCACTCAGAACTACAACA ATGACGTCTCTTAGAACTAAAATAGATTCTGGTGAATCTTCAACAGTTTC TTCTGGAGTTACAACAGATTCTCTTGGAACTAAAACAGAGTATTTTGAAA CTGCAACATTTTCTCCTGGTACTACATCAAAACCACCCTGGACCTCAACA GATTCTCCTAAAACGGCAACAAATTCTCCTGGAGGTACAACAGAGTTTTC AGAAACTACAACGTCGTCTTTTGGATCTAAAACTGAGTATCCTGAAACTG CAACATTTTCTTATGGAACTACAACAGAGTCTTCTAGGACTGTAACAGAG TCTCTCAGAACTACAACAGAGTCTCCTAGAACTACAACAGAGTCTCCTAG AACTACAACAGAGTCTCCTGGAACTACAACAGAGTCTCCTGGAGCTGCAA CAGAGCCTCCTGAAACTACAGCAGAGCCTCCTGGAACTTCAGCAGAGCCT CCTGGAACTACAACAAAGTCTCTTGGAGCTGCAACAGAGAATCCTGGAAC TACAACAGAATTTCCAAAAACTACAACGGATTCTATTAAAACCACAAAAG AGCTTCTTGGAACTAAGAAAAATGCTCCTGAAACTAAAACATATAGCCTC GGAACTACAGCACAATCCGGAAGTAGTGTCAAGACAACAGAGTCTACTGG AACTAGTGCAATGGAAATTGAAACATCCACTACAACAAACCTTCCCACTA CATCTTCAGCCTCATCTACAATTGAAATTGATAATACAACAAGACCAAAG GCAACTGAAAATTCAAAATTCCAATCACATTCATCAACAAAATCTGTAGT GGTTTCTACCACTAAACAAATAATATCTTATAACAACAGTAATAACCAAA ACAAAACAGTGACAACAACACCAACAACTAAACTTAATCCCGAACCGGAG AATAAACTTCCGACCACACCTATGGATGCTTATGATTTTTTTCTTCTTCA AGTAAAACTTTTCAGAAATGAATCACAGAACTGTACAGTGTTTGTGAGTA ATTTTACGGGCAATCAAACCTTCTTCAATGCCACGTGGTCAATGTGTTAT GAACCTCCATCAGGTAAGATTTACGTAAATAGCAACCACCCCTTCTCACA AACCCGGTGGGATTTTATCCACAGATTTATAAAGCCCGAAGGGCTAGATG TCGTGCTTTAAGCTGTTCCAAGTAAAAAATAATTGAATATCGCAAAAAAA AAATTGCTGCTTTTGCTTTCGAAAACCCGTGGAGCTTCTTATGGGTCATC AAGCGCTGAAGTTCTATTGTAATCTCACGTGACTTAGGTTGAATTTCCTA CTTAATCTTGGCACACTTTCAAACCAAAGCACGTCATCTAGCGCCTCGGA CTTTATAAATCTATGGTTTTATCACCCCGCAGTTTGGGTAAAAATAATAA CGGACAAAAACTTGATGGGAATTGGTATTCCAATGTTTTTTAATGGCTTG GGATTTGAATTCAATTGTTTTCTAGCCAGAAAATTCAGAATAGCCGAAAA GAATAGCACAATATTTTGCAGTGAGGATTTGCTTATCTGATTATTTTCAG CGGGGACTAAAATTGGTGTATAATTTTCCATCGGAGACGATATTTTGGCC AATTTTTCCAGTAGGAAAAGTTCCCAGGGAGTCCGTGAGAAGGGAGTGTA TAATAACGACTAAAACTTATGCTGAAGGCAAATGATAAGTAATCAGTGTA ACCATACCGTGAAAACCACAGGTCGAAATCGTATATCGACGCTGTGCCGA CCAATTCAGATTCTATTCAGCGCACAATCAACGGAGAGAAAAGTAACCAT GACGACCATCCAAGATCTTGGATGAAGTTCAAAGTTGATATTCTTATTCC CGTCGTTGGAAACACAGCTCAAAAATGTCATCGATGCTTTTTAAAAAGAG TCATTGATAGAGAATCAGGGTAGTGTAACCAGTGATCAGTTGATATAAAG ATAGACTCCGTGTGGTGTCATCTTCACCCACGATCAGCCATTTTTCTAAG AAATGGCAGAAAGAATATGTACAGGATGTCTTACTAACACCTTGCTTAGG TTCCTGTGTTTGACCTGCGCATAGTTTTCTGTTTGTTGTTTTATTTTGTG GGTGAAAATTAGTGAGTTAGAAACAGGTAGATTGCTTGAGATTTGGTTGA AGATAGTGCCTAATTCAGCTAAATCAGTCTACTGTTCACTGAGAAAATAC ACAGCTCTAGTTTTCGGATGATTGCCAGACTGATTGAGTTCATTCTTTCA ATCCATTCTTGTTGGTCTTACACAATAAACTCAAGGTCTTGAAATATACA CTACCAAGTATCTAAAGTTGTTTATTTTGATTAATTTTACGACCAATATC TCTTCATTCTCTGTTGTTTTTTATAGAACCTGAGCCACCGCAATGGTACG AAGATCCACAGATCTACTATTATGGTGGCGGTGGCATTATCTTCCTTATA TTTCTCTTCGCTATGAAAAGTCTATGCGCATATTGCAGGTGAGTTTTAAG CCGTTTTTAATGGTCTTTGCAAACTCGTTCTAGCAATGTGTTTGCTTTGT TTGACCTCAGGGAGGGATATGTGCTAATCAGTCTCTATTGTACCGACAGG GACGCAAAAACCATAAAACAGCTTTTGGGTTTGTAGATTCTCGTTATTTT GGTCAAAGTTCGAAAAACGTTCCTGGAATTTGTGAAGATAGGCTCTCGAA GAGTCGTAAAAACATTAATTTAGTCTCTGGTCTCAGTTTCTTTAAACTTT GGCTCGGATATACCGGTCACCTCATTGAAGCAACCTTGATTCCTGAATAT TGTAAAATTCCATAATGATGATATTCTTATCAAAGTCTTATTTTGTTGGT CGATTTAATCACAAATGTTTTTTATATTAACAAGATATTTTTATAAAAAG AAAATAAGTTTCCACATTTGATAGTACGATAGAAACTATTTTACGTACTC TTTACCGATCAAATTTACTTTTATCTTTCAGTAAGTACAGCAGTGATTAC TTGTTGCCACGCTGGANTACTGTTCACTGAGAAAATACACAGCTCTAGTT TTCGGATGATTGCCAGACTGATTGAGTTCATTCTTTCAATCCATTCTTGT TGGTCTTACACAATAAACTCAAGGTCTTGAAATATACACTACCAAGTATC TAAAGTTGTTTATTTTGATTAATTTTACGACCAATATCTCTTCATTCTCT GTTGTTTTTTATAGAACCTGAGCCACCGCAATGGTACGAAGATCCACAGA TCTACTATTATGGTGGCGGTGGCATTATCTTCCTTATATTTCTCTTCGCT ATGAAAAGTCTATGCGCATATTGCAGGTGAGTTTTAAGCCGTTTTTAATG GTCTTTGCAAACTCGTTCTAGCAATGTGTTTGCTTTGTTTGACCTCAGGG AGGGGTATGTGCTAATCAGTCTCTATTGTACCGACAGGGACGCAAAAACC ATAAAACAGCTTTTGGGTTTGTAGATTCTCGTTATTTTGGTCAAAGTTCG AAAAACGTTCCTGGAATTTGTGAAGATAGGCTCTCGAAGAGTCGTAAAAA CATTAATTTAGTCTCTGGTCTCAGTTTCTTTAAACTTTGGCTCGGATATA CCGGTCACGTCATTGAAGCAACCTTGATTCCTGAATATTGTAAAATTCCA TAATGATGATATTCTTATCAAAGTCTTATTTTGTTGGTAGATTTAATCAC AAATGTTTTTTATATTAACAAGATATTTTTATAAAAAGAAAATAAGTTTC CACATTTGATAGTACGATAGAAACTATTTTACGTACTCTTTACCGATCAA ATTTACTTTTATCTTTCAGTAAGTACAGCAGTGATTACTTGTTGCCACGC TGGAAGCTCCAGAGACGCAAGAGAGGACAGAAAGTTCGTGAATTTTGGTG TTTACAACATATTGTGTCTGTCGAAGAACTTCATAAAAAACCAAAAACCT TTAAAGTGCGAGTTGATAGGACAATTCCGTAAGAATTGTTGCTTGAGATT GTCTTTTATATTATGAGAGGAATATCAGTTTTTTATATTTGTTCACGCAG TTAAAATATGAAATTACGTCAA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00061691TCONS_00061691Clytia hemisphaericatranscript
TCONS_00061690TCONS_00061690Clytia hemisphaericatranscript
TCONS_00061689TCONS_00061689Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00061689-proteinTCONS_00061689-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_36supercontigscaffold_36:1336801..1341472 -
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
MUC21mucin-21 precursor Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0 0.04 0.04 0.05 0 0.02 0 0 0.22 0.02 0.34 0.17 2.69 2.44 0.82 0.29 0.32 0.34 3.26 3.17 0.53 0.61 0.16 0.3 0.57 1.16 0.3 0.13 0.05 0