XLOC_038852 (gene) - C. hemisphaerica

Overview
NameXLOC_038852
Unique NameXLOC_038852
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_361:221186..225274-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_038852 ID=XLOC_038852|Name=XLOC_038852|organism=Clytia hemisphaerica|type=gene|length=4089bp|location=Sequence derived from alignment at scaffold_361:221186..225274- (Clytia hemisphaerica)
TATGTGGATAACCCCATATTTTAGTCTGCTGTTTCTCTTTTTCAATAAAA
ATCAATAATATAATAATTTGTTTTTGATTTGCATTTAGCATAAAGTATTT
AAAAACCTGGAAAATGAAATTCAGATCAAAACTTGTTGACATTGGTTGCA
TACACCAACTGACAAGTAAGAGGTTTGGATGACAAACAAACCCCCCCCCC
TAGTCAAATTATAGTCTATTGGTATTCTATTTATGTTTCTTTCATTTCCT
AATGAATGGAATCAATGGCCGATTTCTATTTTGTATTACTTGATCAATAA
TTGGCGTAGCATCTGCTCTCTTCAATCCACTACGAATTTTGGTATGTGAG
CTGCTTAAAGAATGATAAATTTGAAGACTTTTCAATGTAATTNCTTAATC
CACTGCGAATTTTGGTATGTGAGCTGCTTAAAGAATGATAAATTTGAAGA
CTTTTCAATGTAATTGATATGTTCTAGTTATCAGGAACATGATAGAAAAT
TGTTTTGAGAGGTTAAGAAATGTTATGAACGTCTAAAATTTAAACCTATT
TATATTTCTCCTTTTTAAGAGATTTTAGGGACAATTTCCAAGATCACAAA
GACATGTACTCTGATTTTGAGCGAGCAACAAGTTGTTTTCACACAAAATG
AGCGGGCTACTGGAGGTGGAGCGTCTCTTTGGTGTGAATTAAAACAGGTT
TGTACTAAATCAAAATTATAGTGTAATTTACCTTCTAGATGAAATTAAAG
GTTTTGCTTCTTATTTATAAAGTACAAACAAATTAAAATGATGTAATTAT
AGGGGGCAGTTAAATTCGAATAACAGGCAGGGCATACCAAGTAAAAGATT
GTAAACATTAACAGAAGTCTAATCATTGAATTCAGAGTCACTGAATTTAA
GGAAAGACATTTACATGAAATCTTGGCTTTTTTTTTAGTTATACTGACAA
ATAAAACTGAAAATGAGTCTGTTCTCTTCTTCCAGTGTGGTCCAAAAGGA
TCTAAACACTTCCACAAAGAAGTTGAAATAATATTTTTCTTCTTAGGTTG
ATTTCTTCGAAGATTATCGAATCGAGGGAAAAGATGACAACAACCAAATC
TACCTTGAAATTATCAATGAGAATCTACTGAGAGCTTTGAAATCTGGACA
GAATGCCCAATGCATTAAAATCAAATTGGTTAAAAAACAAACGCCATGTT
TAATGTTTGAAGTTTCTTTGGTAAAGAACACGCTTATTTTCCATATTATG
AATTTCTAACCCACCCTTCGTAAAAAGTGTTCTTTTGTCCACCAGGGGTA
TTTTTGAACTAAATTACATGTTTTTTCTTTTATAAGCATTGCACTTATAA
GCATATCTAGGCTCAGATATGGGGAAAAATTAAGCATATGGCCTGCATTA
CTTGAGCCTACGAAAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNAAAAAAAAAAACATGTATAATAATTTAG
TTTAAGGTGGGAAACTTAGACGAAACTAAACTTTGGTTACTCTTTAGATA
GAAACACCAAGCAATAATTTAAACACTTTTTGGTTTGACTTCAAAATTTC
TATCAGTGTGAGATTTCAAGTCTAGATAGAGCAATGTTTCTATTGTTAAG
AATAAAAGCAAGATAATGATATTGCTTATCCTCAGTCAAAGTATGCTATT
ACGATATTCTTTGTTATTTTTTACTTCTTGGAAATGCATTGAAATACTCA
TTACAGGGTAATCAGTTAATTTTATTTCCTTCTATGTTTATTATCAGCCT
TCGATGACAGCTCACACACGAGTTGTGGTTCACGACATTCCAGTAGCAGT
CATTCCAACAAGATTTTGGGAGAATTTTCAAAGACCAATACTGCCTGCTT
ACGATGTAAGTAACATGAAGAGAATTGTTGTGTTTTGGAAATGAGAATAA
CTGATAATTTGGAGGAAGAAAGATTTGCTTGCTTACAAAACTCTTTCTTC
GGATTAAAGCAAGATTCAGATTGATTAGAATTTTTAATAAGACTAAATTT
AAGCTGATGGGTGAATCCTTGTTTAGAATAGAGTTTATAGAGGAGAGAGG
TTTTACTTAAAATTTGTTAATTTTTAATCTTCCCATCTCAGATCAAAATT
TCACTACCAAATTTGAAGATTTTAAAGAATATCATTGAAAGAATGAAAAA
CATTTCAGGATTTATGGTGAGCAACCTGCACATCAATATTTTACTTATAG
TTCATCCAAGCTTTATTGTTGAAATATACTTCTTAAAGATAGAAACCCAA
TTCTAGTTTTTAATCGACAATAAATATTTGAAATGAGTGAATTGTATATG
GTCTTTCTATCCCTTAAATGTCATTTATATTGGATAACTTTAACTAACTA
ACTAATATTTTAAGTGGCAGCTCAGCCATTATCTCCCCCAGGGGCCACTA
TAATAAATAAGTATGAATTAAATTAAGTTTTAAACAAGAACAAGAACTGG
TAACAATAAATTTCTAATTGAAAATATGCCGTTTCAGAGCTGATTCGAGA
GTAAGAATTGACTGAGTTTGTTTCAGATTGTTAGGGACATTATTCCAGGT
CGATGTGGTAGAATTTACAAACGTTTGGATTGCTTAAAGGGCATCATTTA
ACACATCTCTTGCTTTTTGTTTACACCAACACTGTTGCAGAAAAGTGAGA
ACTCTATCCACACCGCGCGAGAATGGATTTGTCAACATGCGAGGCCTGCC
TCCTTTCTATACCATAAAAAAGAATCCTTTTCGTGTTTTTAGGTACTGTC
TGCATCGCAGAACGGGAACTTATCTTGCAAAGTCGAAACTGAGGAAGTCA
CCGCCACAACTTATTTCTCGAACATGGAAATCGAAAAAAACGACAATAAT
ATGCCTCACAGAAGCCAACGAAGATCTGTAGACATTGACGAAGATGATGA
ACTCGTAGAAGCTCGTATCGATGTTCAAAAACTTGTGACGTTTTTGAATG
TGCAGCAGTTCAATGCTAATAAAGTTATGTGTGGGATTGTAAATGGGCAA
TCTGTTCATATGTTTTTACAATGTGGAGATATGTTTTTCCAGTATTTCAT
ACCGGCTATGAATGTTTCCATCCTGTGATTTGAACAAGGAAGAAAATTTA
CAAATGTTGGTGAGAAGCGACTGTAGGATGTTTCGGATTTCGCTATCTTC
AAAATAGGAAATGGTCCAGTGTCCAGTGTGAAATTATCCTTTGCTTTTAA
GCATCCGGTCTTTTCGGCTCATTCGGGGCTACTTTCTTATGGAATATTGT
TTTGAGAAACACCATTACATTTATATAAACATGAGGAGAATCATGAAACA
GTTTCAAACGCGAGTTCTTGATTGTGGATGTTTCTTGGACACGTTTTTCT
TGAAAGGGACTGTGTCAAGTTTTTGGTCCCATTCTGGAACTAGTGGGTTC
CACTTAAGTGAAATATATTGATTCAACTCTCTTTATTCGAATCTCTTTTA
TACAGATCTTTCTGTAATTCGAACTAAAGAATTGACCCCTTTCAGTTGCA
AAATGGTTTGGATTAATTTCTGTGATTCGAATCTTTCTCTAATTCGAATC
AGAGAGAATCAACTGTATATTGACTTTAACAAAGGTGGTCAGTGATTGGT
GATATAATTTAATATGCCTATGTATATTATGTATATTATGTATATAAACA
TTGTAGTTAATTGTTGTTATTAAAAGTCTACTTACTATTCATGTTCAATA
CTTCTTTCGATAACATGCATGTCTTTCAGATGAGATGGAGTTTTTATAGG
ATACTTTAATAATTGGTCATTTGAAGCAATAAAAATGAC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00061981TCONS_00061981Clytia hemisphaericatranscript
TCONS_00061980TCONS_00061980Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00061981-proteinTCONS_00061981-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_361supercontigscaffold_361:221186..225274 -
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
HUS1Bcheckpoint protein HUS1B Homo Sapiens
HUS1checkpoint protein HUS1 Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
28.8	29.5	19.54	17.31	7.17	5.8	7.89	8.74	9.27	7.74	7.97	7.48	5.93	5.85	5.05	4.3	8.75	6.13	2.81	5.24	6.12	5.57	12.2	10.49	14.64	14.12	0.91	1.01	3.81	4.65