XLOC_038871 (gene) - C. hemisphaerica

Overview
NameXLOC_038871
Unique NameXLOC_038871
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_361:745539..755927-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_038871 ID=XLOC_038871|Name=XLOC_038871|organism=Clytia hemisphaerica|type=gene|length=10389bp|location=Sequence derived from alignment at scaffold_361:745539..755927- (Clytia hemisphaerica)
CATAGAAACAAACCATTAAAAAGCATATTTAATTCAAAAATGAGTTTTGA TAAATACAAAGAAAAAGTGGAAGAAGGGGATACTGTTGTTCTATACTTGG TAAGTTACTTTTTCCAAAAATTAAGATTCTTTGTGTAGATTGATGTTTTT ATTCTTACCATTCAAATGAACCTTGCTCACTCTGACTTATTTCACAAAAT GCCAGGTAGCATTTTGCACCCGGGTGCAAACCAAATCTTGGGTTTGGTTT GCGAGATGACAGGTTTGTCCGAAAAGTTTGATATAGACCCTTTAGAGAGA CTGGATTTCGAAAATGTTGTCCACTTTTTGACGTTTTTATCAATCTTAGA GAGACTATTTCCCCAAAATGTCTGCCAAAATTCTCAAATTTTAGTCCAAA TTTCAAAAAAGATCATGACCCTAGGTATACTATTTTTGATTTCGTAATTT TTGAACCCTTACAGAGACTCAATTATGCTTTTAAATGGTTTTTGTACCCC TTTGAGGGACTTTTAATGGTGTGAAAAAGGTGACCCTTATGACTAGCACA TATCCGGCACGGCACCCATTTTACCTTAGTATCACCCCCGGGTAGGGGTG CACCACAAAAAAGGCAAGGCAATGTATTCAGTTTTCTCAAGGTTTTTAAG GAGACTGAATATTTTTGCAATAGAACTAAGAATATAAATAAAAAGAAACT TTTGATGCTGCTCCTGATACATTAATTTTTAATCATGTTTAGACTTTTCT GTCCACCCCTGTCTTAGTGCTCCAGAGGAAACGCTTTCCCTCAATGGGGA TGAAAATTTTTTATCGAAATCACCATGGAATATATATTGTTTCCATATCA AAAACGCCATGGGAATGGTTTTGGAATGCAATTTTCGCCACTTAATTACT AATAGGTTGTGATTTTTTAGCCAATTTTTCCAGTGGGGTCTTCACCTTCA TTCAAGTCTTCCATTGGAATAAAATGTATACAGTAATGTCTTAACATTCA TACTCATTCTTAGTCATAGAAGAAGATTTCGAAAAACAGGAGAAATTAAG GAGGGATATTTCTATTCAATATAGGGCAGAAATTCAGCCTTGTCATTTCA AATAGATGTAACGAAAACTCATCAAACCAAATATGGGGCCTTCCCACACA AAGATCTAATCGGTAAGGCCTTTGGAACCAAGGTAGGAAGATATTGGTTT TTCTGTTATAAATATTGATTTGAAAAATTGCATAGAAATTCTATTTATAA ATCAATGTGAGCCTGGATAAAAATAAAATCTTCATTAGCTTTGGTCGTTG AAGCTTTTTATGAATTTCTTTGTACATCATAGCATAAAGAATGAACTTTT TTTAATTGAACAGTTAAAACAATGACTTGGAAATGAAATGTTCTATTTAC CTAATCTTAATCACATCATCACAGGCATATTCCATGAAAGGAAAAGGGTT TGCTTACTTACTGCATCCCACACCTGAGTTATGGACAGTGACGCTACCAC ACAGAACTCAAATCTTGTATAGCACGGATATCTCCCAAATCACAATGGAA TTGGATTTGAAACCAGGCTCTATCGTAGTTGAATCAGGCAAGTAAATACT TATTTTAATTTAGAATATTGTATGAATGTTTGTCTGAAAACTGCATTGGA TGAAGTTTCTCGAGGAATATAAATTTAAACCTAGGACTGGATTGTAAAAA AAAACTGCAATTAGGCTGGACTTAAAAAATTGTTGGTTTGTCGTCACCCG ACCGACCCTACCTCGAAACTTGCCGACCCAAAAAATTTTATTGCCATTTT AAAGAAGATTTTTTTTCCTTCAAAAACTTCAAGCAATAAAAAATCAAAAC TCGTATCTTGTTTGTCTCAAGCATAAGAATCGTAAATTCCCTGCTAGCAC TTCTGTTTTTTATTCAAAATTACCTAAATGTAAACAAACNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAACCCTTCCAT GGACGAAAATTTCATAAATCGCCAAAATAAAAAAAAATTCCGACCGACCG ACCCACCTCCAAAATCTAGGGTCGGGTGACGGCAAACCATCAATTTTTTA AGCCCAGCCTTAGGGTCTTTGAGCAATGGAAAAAGTGCTGAAGGTGAGTC TAGTACGGTTGCTAGAAAATTTTAGCAATTATTTCATTCCCTTAGGAATT AGATTCTGGTAAATCAATCATAGCGTTTTAACTTGTTCATTCTCAATATA TTTTAGGTACTGGAAGCGGATCGCTGTCACATTCTATTGTTAGAACGATA AAACCTAATGGTCATTTGCACACTTTCGATTTCCATGAAAAGAGGGTAGA AAGTGCAAGGTAAAAATTGCGTTTTTATTCTGCTAGCATATATCACTAAT TTGATTTATGAGTGTCAGAGATTATGGAACCAAACTGCATAGCTCAACCT TTCAGAAAACCTTTAAAGTGGTGGTATGATTTTCTCCAAATCAATAATGG CAGCGTCAACATTTTATTCATGTTTTATATACGGAAATTCTTCAAATTAA ACAGCTCGTTAAAAAAATTAAGAAGGGGATATTGTATTATGGGGTATTGA ATATAAACGGGGGTCTGGGTATAAATCAAATGTAGTCTTATTGGTAGACC TAGTCGACTTTTGTTTTCTTTTTTAGGGAAGAATTTGAGCATCATGGTAT TTCCCAATATATTACCTCTAAATGCGCTGATGCATGTGTTGATGGGTTTG GACTGGAAGACTGCGCTGATGCAGGTAAGAATTTCAATTCTCGACTGTCT GTCTGTCTGCCTGCCTGTCTGTCTGTTTGTCACAAAAACTTTGCGGCAGC CCGGCCGGTGTGACTTCAAAAATTGTTGGATTTGACTGAAGTTTGGCACA CTTGTTTCTTGGGTAAATATCTAGGGTTGCTTTTTTCATTGTTTAAAAAT TTTGATTTTGGGGGCTGAGGACGAGCTTTTCACCAAAACGAGGCTAAAAC TTTGAGGCAGCCTGGAGACTTCCAACAATATGGTCAGATTTGGCTGAAAT GGTTTGTTTGTTTTGCTACAATCAGGCCGCGTTGCGCATGTTCAACTATT TGATTAACTACCATAAGTTTAAACATCACTGTCAGCTACTTGTAGAGATG TATAGTTTAATTTTTGCGATACTTTTTGGACCTACCTTCGGGTACCCCGG TGGAGGTTCTATAAATTAACCCATGTCCGTTCGTTCGTTCGTCCGTTCGT CCGTCTGTCTGTTACCAGCTTTTCTCAGGATTGGCTCATTAGTTTTTTCT GATTTTTTGCACAATGATGCAAAATGGCAATGCCCAGANNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTT GGGCAAATTTGGGCCAAAAACTACCTAAAAATAGGGTTTTTTGGACTTTG TGCAAAATCCTGTCATTACTTTTTTCTGATTTTTTGTACAAAGAGGGAGG GCAAGATTCTCTAAATAATGGATAAAGTGGTTTTTCCCGGAAAATTCTTA TTCGCCTTAAAAAATGGATTTTCGTATTTTGAGGGAAATTCCCTTTAACC AAATAAGAAAATATAGCTTTTCTCAATGTTGACTCATTATTTTTTTCTGA TTTTTTGCACAATGATGCAAAATGGCAATGCCTATAAAATGTGTCGGAGC TCGATTTTCGAAAAAGATATATTTGGGCAAATTTGGGCCAAAAACTGCCT ACAAATAGGGTTTTTTGGACTTTGTGCAAAATCCTGTCATTANNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNTTCTCAATGTTGACTCATAATTTTTTTC TGATTTTTTGCACAATGATGCAAAATGGCAATGCCCAAAATGTGACAGAG CCAGATTTTTAAGGAAAATTTTTTTCGGCAAATTTGGGCCAAAAACAGCT TNCCCCCATTCAAAACTGGAAAATTGATTCCCCCCCCCCTTTATAAAGGG GGGGGGAGGACACTATGATTTTGGCTCTCACGCAAACATTTCATTAATAC TTTCAGAGGTCAGGGTCATTATCAAAGTTTATTTCTTCATTTTAATATTT TCTTTTTAATTATTAGAAATCTGGTGGCCGTATCTGTTCATTTTCACCGT GTATCGAGCAAGTTCAACGCTCATGTGTTGTACTTAGAAGATTGGGCTTT TGTGGTAAATAAATTTCTTTTTTATGTTTATTTTGTCATACCCAGGCCGG AGGCCGGGATTCCAAATGGTCTTAAAAAACCTGGAAAATCCTCTTTTAAA AGGTTTCTTCAGGATCTTTTTCATTGTTTTCTTCGTCCAAAATAAACACA ATCACATAATCAGCACACCTTAAAATTGTATTAAAAATTAATAGCATCAC AAGATGAAGTCATATCAGTTCTAATTCGAGAAAAAAGACCAATTTTCAAA GAAAGATTCCTGGAACATTACACCTTTTACAGCTCTTTTTAATGAAGAAA GGGTCTAAAAGATTTAATCAAAAGTCAAGGGAAATTATACTCTAGCGAAT CCTATATATATATCGACTGTCCTTGATAACTCCAGATGAATTCCTATCAT CGTCATTACATTTTATATGCCTTATTAGTTATCAAAACCAAGTTCAATTT AGCTTTTATTCTTCTGTAGAAGTGAAAACAGTCGAGTGTTTGGTTCGAGC AATGAACGTTCGTACGACTCCAATGCCAGAAGCCAACACTGGAGCTGGTT TCAAATGGGTAAGAGACTTTAGTCCGCCTACATATTGTTGTGTTAATTTT CAGTTGATTTATCACCGAGTTTAGTAGTAAATTCATTCTGAAGTCCAGAA GAGGATATCGCATGACCTTGAAGGTTGTGGGGTAGGGTGATCATATTTTT GGTACATATCCCTAAAAATTGAGTGAACCTCTAAATTAAAAACGCTAATT TCTTTATAATTATATCTATTTATTATCGATGGGCAATTTCATTTTATGTC CATACAGGGGGGTGGACGAACATTTCCAGGGTGTGACTTGAGCAGAATTT CCAAGGGGTCTAAAATTATTTCAAAATTTCCAAGGGGTAAAAAAAATTAT TTTAGTTCGTCCACCGTCACTTTAAGGTATGAAAATAAATTTTCCAAGGG ATTTTTTGCAAATTTTTCCAATTTTCAGGGAGTATCCACGCATTTCCAAA AAATCGTTTTTGATTTGAAAAGGTTCATCCACTCTCCCCCCCTGTATGGA AATTTAATGGAATGGCCCAATTTTTTATTAAAAATGAAGAAGTAACTCAC AATTGCCTCACTTTATTTTATTGCTTATACTCTTTTCATGCATGAAACAT CGTGTGGCAATCGTAAGCTGCTTCTTTATTTAACCATATTTTGCTGGGCA TTTTCTCTAATCTTTGAGCACTTTATGATTCTTTATATTTCATTGTATAT CACATTTTTCTCTATATAGGAAAAAGTGGAGAAGACGACCAGCGTAACTA GCGAAGATGAACCACAATCTAAAATGAGAAAAGTAAGTTGAATTGATATC TCTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNCTTTATTTTTCCATTCTGAATTTTTGTACAATTATTGTCACTT TTTTCTTATTTTCATCTGATGTTAATCATTAGGTAGGTCCATTCAGCATG TTGCTTGTTAAATATTGTTCGTCAAATTTATCTTTTGGAAATGTTATTTA TTTTAGTATTTCTGGATCTACCAAAGCCCTGGGATGCCATACCACACGCG AAAAAAGCATTAAAGGTATTCCTCAAACATAATATTGACAAGTTTATTGT TAATTTATTAAAAATCTTTTGAGGAGATTCAATATCCACATCCTCAAAGG ATGTCTTTGCCAAGATGATGGGATTCATTATCCATTCAATAAAGAAAATA TTTCTTGGGGGGGGATGCCTACGACACTATAAAATTGCCCTTTGATTGAT AACCTATTTTTCGCATAGTGTCCTCCAGGGTTTGTTCCCCCCACCAAATT TTTGATTTTTTTAAATCTCCCCNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNAAAAGAATAAGGGGACAAAAGTGTCCCCCCGCCGA AGAGTGCAAAAAGTGGTAATAGTGCAATTAACGATTAATTGCGCTCCTCT AAACCAATCAGATTCGAGTAATTTTGCACGGCTGACGATTACCTTTTTAA TTATTAGAAATCTGGTGGCCGTATCTGTTCATTTTCACCGTGTATCGAGC AAGTTCAACGCTCATGTATTGTACTTAGAAGATTGGGCTTTTGTGGTAAA TAAATTCTTTTTTATGTTTATTTTGTCATATCCAGGCCGGAGGCTGGGAT TCCAAATGGTCTTAAAAAATCCTCTTTTAAAAATTTTCTTCAAAATTTTT TAAGTTCATTGTCTTCCTCGGCGTCCGAAATAAATAAAATCAGCACACCT GAAAATTGTATTAAAATCAATAGCATCAAAAGATGAAGTCTTATCAGTTC TAATTCGAGGAAAAAGATGAATTTTCAATGAAAGTTTCCTGGAACATTAC ACCTTTTACAGCTTCTTTTTAATGAAGAAAGGGTCTAAAAGATTTAATCA AAAGTCAAGGGAAATTATACTCTAGCGAACTCTATATATATATATATCGA CTGTCCTTGATTACGCCAGACAAATTCCTATATTGTCATTACATTTTATA TGCCTCATTAGTTCAATTTAGCTTTTGTTCTTTTGTAGAAGTGAAAACAG TCGAGTGTTTGGTTCGAGCAATGAACGTTCGTACGACTCCAATGCCAGAA GCCAACACTGGAGCTGGTTTCAAATGGGTAAGAGTTTGAAAATGTATCCA CTTTAGTCCGCCCACATATTGTTATGTTATTTTTCAGTTGATAATCACCG AGTTTAGTAGTAAATTCATTCTGATGAAGTCCAGAAGAGGATATCGCATG ACCTTGGAGGTTGTGGGGTAGGGTGATCATATTTTTGGTACATATCCCTG AAAATTGAGTATACCTCTAAATTAAAAACGTTAATTTCTTTATAATTATA TCTATCTATTATCAATGGGCCATTCCATTTTATGTCCATACATGGGGGGT GGACGAACATTTCCAGGGGGTGACTTGAGCAGAATTTCCAGGGGGTCTAA AATTATTTCAAAATTTCCAAGGGGTAAAAAAAAAGACTGATTTTAGTTCG TCCACCGTCACTTTAAGGTATGAAAATAAATTTTCCAAGGGATTTTTTGA AAATTTTCTAATTTCCAGGGAATATTTCCAAGAAATATTTTTTGATTTGA AAAGGCTCATCCACTCCCCCCCCCTGTATGGAAATTTAATGGAATGGCCC AATTTTTTATCAAAAAATAAAGAAATAACTCACAATTACTTCACTTTATT TTATTGCTTATACTCTTTTCATGCATGAAACATCGTGTTGCAATCGTAAG CTGCTTCTTTATTTCACCATATTTCGCTGGGCATTTTCTCTAATCTTTGA GCACTTAATGATTCTTTATATTTCATTGTATATCACATTTTTCTCTATAT AGGAAAAAGTGGAGAAGACGACCAGCATAACTAGCGAAGATGAACCACTA TCTAAAATGAGAAAAGTAAGTTGAATTGATATCTCTACTCAAATTTATTT TGATGGATAAAAAAGTTTAGTGATAACTTCTTTGTAAAACGAGAAAGGAC AAGGTTTGTTGGGTATAATGCCCATTCTTTACACAAACAAAGTTCTGTGG TGTCGGTCAACACGATAAGAATCCCTCCTGTTAAATTATGATTGAACTTG TTTAGGTCTCAGATGCAGAAAGTGGGTCAGACAGAATCACCACAAGCGAC ACAGCAAAAGAGAATTCGAAAAGTGAAAACGATCAACAAATGGATGAGAC GAATCATAAAAATGAAACCGAAAGTAAATCAAATGAAAACGTGAACGCTA ATACGAATTCTAACCAAGAATCGTCTGAAAATTCTAAGAATTCTCCGGTA AATCAACAATCCTCAAAAGTACAAAGCGAAAATGTTGCAGGACTTTTACC AAATGGTATGGTAGCTAAGCTAACTGCAGGAACAAAGCCTGGTAATATCA ATGTTCTGACGAGTAAACCTGGAAAACAAATGCCTGGTCATACAGGTTAT CTGACTTTTGCATCTTGGTATCCTTCATGTAGTAGTGAAGTTAAGAGAGA AGAATAGTTTTTATATATTATAAAATCCATTTAAAATGAATACTCGCGAT TGTGTTGTTTCGATATTCTTAGATCTTCTCATTCGATATTATTATATTTC CTTTTTATAGTTTCTTAACGGAAGGTACGCATCTATCTCTTTGTTTTCTT TAACCCGACATAGTAACTTTTTAAAACTGTTTTTGAGATGTAATCACATA CTAACAGATTGGCTTGTCCGATTTGACTAAAACTTGTTC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00062013TCONS_00062013Clytia hemisphaericatranscript
TCONS_00062012TCONS_00062012Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00062013-proteinTCONS_00062013-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_361supercontigscaffold_361:745539..755927 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
40.49 36.27 15.89 13.57 21.46 17.64 28.06 30.81 27.83 32.3 22.73 20.92 25.71 26.36 17.39 24.58 29.1 25.77 7.37 9.92 19.85 18.98 44.61 39.5 22.9 25.21 11.71 8.91 24.82 25.67