XLOC_038992 (gene) - C. hemisphaerica

Overview
NameXLOC_038992
Unique NameXLOC_038992
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_362:520831..525175+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_038992 ID=XLOC_038992|Name=XLOC_038992|organism=Clytia hemisphaerica|type=gene|length=4345bp|location=Sequence derived from alignment at scaffold_362:520831..525175+ (Clytia hemisphaerica)
CGATTCCAATGAATCAACATTTGAAGAACACTATTAAAATCAAAGAATAT GAAAATATCTCTTTGCTTCATCTGACCTAATATTTGACTTTACAGAATCG TTATAGTTTGACGGTGTGTAAAGTTCCATAGAACGTACCACAGGACATTC AGATGACGGCAAAAATTTTGGTATGAGTTTTTCGCGGTAATGTTATTCGT TGGTAATGAAATATTTTgtgaaatgattttttaagaAGATTCTTTATTAG TAAAGTGAAACATATATCAACCCACGTAAATTTTTTTACGTGTTTGATTA TCTCATCATGGCTTGCGTAAGTGATATTTTCGTGCTTGTTCAAAGTAACT TTCGGATAATTCTTTTATTGCTATTAGGTTTTATGTGAATTTAAAAATCT TAAATCTTTACTCGTTTTAATTATATTTCACCTTGTTAGTGTTTTTCCAC AGTACAAAGCGAAAAGCATCACTTTCTCTAGACCCAATGAGGAACGTGTT TAACCAGGGAGAATAAAATGAAGCGATAAAGTGATTTTCAGCCTAATTTC CTAGTGGAAATAAGGGTGGGTAACAAAGCTGTTAAAATGTATTCGTCTAA GGCACGGACCTTCACAGCCAGCAGAGGTAGGCCACCGTTACAGTTTGAAC GGGCTCTTTCTAAATATCAATTTTTGGTAAAAAATAAGACCCTCATTAAA AAGATTTTCACCATAATAGAAAACAATTAGGCCTGTCAAATGCAAAATCT GAAATATTTCATCAAAAGTCAACTCTGGTAAATTTATAAGATTGTCAGAT TTTATCAAAGTCTGAAAAGGAGGCAAACCAGCAGTGTCCCCGTACTTAAT TTTACCTAATTAACCTTCTGGAGTTTAATTACCTAAACAGCATTTCACAG TTTTCTTCATTATAAACATTAGGTACGACGAATCATTCTAACAATCACAA TCTATTCAACGTTATCAACAATAACAAATTGTCAAATCTTGGAATTGAAA ACACAAGAAGATCTTGAAgaaaacattttacaaaatgaaaaagtttggtT AGTTTCAATCCATCAGACAGAGAATCAACAAAGAGAAATTGTACATACTG AGGACCTTTATAGAGGAATATTCAACGCTGCGCAGATTGAAAGAAGACAG ATAGGCACAATTTTAGATGTAAgtgaccaaaattttaaaatatctttctc cAAAGAATGTCGATGTTGACCTTTGTGTAAAGCTAAGCCTACACTGATGT CTTTTTCCTAGCGTCTGCAAAATGCAAGGTTCGCCGGATTTCCCTTTCTC TAATGAATGATATCATTATATATCCTATATTACTAAATcatgttggacgg tgaaaaagaatgcggctattatattttcatttatattaCTGTATTATCAT GATTataacgactccagtctagtctCGATGCCTTGATTACAGTTTGTTTT TGTACTTGTTTGGTCATTGAAATGTAGGTCTTGTCACGTGACATAGTGTA CTTAAATCTTATATgtaatttgtttttcaaaagtgAAATTTAAGATATAA ATAAATTCATAAAGAGTGTTATAGATAAACTATAAAACGAATTATGAAGA TTTTCCCTTTCATCTGATATTCTTTTTCCATACATACTGTATATCCCAAT AAACAGAAAGGGTCCGAGCAATAAACCCTAATGGCGTGCGATAGCTAATG AGCTTTAAGTAGACCATGTCACGTGACAAGACCCACACCCCAGTGTCCAA ACAATCAAAAGAACAAACTGTAATCAAGGCATTGACACAGATaagactac cttaagggaacttattttggccggaactaattttggcgaatttgacgaaa ttagttcccaccaaaattaaataatttgctcactcgccaaaataagttct cgccaaaattaaattttttggtattttgcctaaataNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGCGTGCGATAGCT AATGAGCTTTAAGTAGACCATGTCACGTGACAAGACCCACACCCCAGTGT CCAAACAATCAAAAGAACAAACTGTAACCAAGGCCTACACAGATaagact accttaagggaacttattttggccggaactaattttggcgaatttggcga aattagttcccaccaaaattaaataatttgctcactcgccaaaataagtt ctcgccaaaattaaattttttggtattttgcctaaataacttcttgagtt cACAAATAACGCCTCAAATAAGGCAAagtagaacagatttacgctgtctt tcgccaaaattagttcccaccaaaattaaaaaaattcatcaatcgTCAaa ttaagttctcgccaaaattaaaaattttcaggatttttgccgCTCTGACC GATAACCTAACAAGCTGCTTTTCATTCTGTTTCAGAGCAGTTTAGCCAAA GAAACAaacttcattattttcccatacGGCTCAAAACGTTCAAAAcaaac gaaacaaaaacatGCTGTGAATCTAAATGAGGCTTTGAAGATCGTTTCGG AATTTATCCCCGATATCACAACCCGATTGGATTCGAATGTGGATGGGACG AATTCACAATTACGTGcattctttcaaaagatttttatgactcgaccaat caaattcccTGTCATCTACTTTACAGGTAATCCATCTCTTTTTGGCCCAA CCTCTCGCTCggttttaaagggacataaaagtagtaaacattgcgcgaac cacgtgtcattaaagagaacaattaaaatcacatgtccaaaacaaacttg tgaaacaatagaaacaatcaaaaatcagccatatttgttttgattttgac acgtgacatttgttttgattttgtatcccacttcatacggtttgtttaca aagttcgatagtacttttatgtccctttaaaggaCATAAtttagaacacc cccttctcacagacccgctggtcccccatcccactggaaaaatagactaa aatatCGTCTTCAGTGGAATAAGTTATACTTTAATTGTTGtacccgctga aaataatcaaataagcaaatcctcattGAAAATTATTAATTCCATCCTCA gtgaattttctggctagaaaacaagggaatttaaatccccagccataaaa acatgggaatatcaaacTCTATCGAGTGTTAAAGCGTTATTTTTACTCCC CCTGGCTAAAAAGATCCCACTGGGTCAGTCAGAAGGGGTTGTTATCTGCT CCAAGTAATCTCCCATGGACACAAACCCTGGTTGAAACAATGGTTGAAAA AATCCTAAGTCTGTGAGAAAGTAGCCTATACTAGACATCACGCGCGTTTT ATTTTACGCAATTAACGTCTATTCCACTTTGCGACTTTTTCGAATGTTTT GAGCCCGGGTTTTCGGGCTCTAAACATTCGAATTTTTGACGTCACTTTTA ATTTTCGAAGCTCCTGTTGTAGCAAAAGAATCGAATTTGCGTCAAAACAC TTGAAAGGCTTTCTATTTTTCGAAAATCGTCAAAGTGAAACTCACTAAGA AACGAGATGAAAAATCCCGGGTTTTAGTGAGGTGCACGCTAGTGAGAAAG GGGTATAACATGAAATTTAAATCTTTTCATAATTCCTCTAATCAAATGAT ATTTTATCTTTATAGAAAACAAAGAACCACCCATTGAAATTCGAGCGTTA GCTTTGAAATATTCAAGTCTTTTTCAATTTGGAGTGATTTCAAGACCAAC CAAAAACGCTTTAAACGCCTACGCAATAAAATCACTACCACACTTCAGTG GATACATTATAGAGAATGTGACGTCACAGCCTCGCTTGAAGAATTACATT TACCAAGGCCAGTTAAACGGTCCATCTGAGTATCCTTTCCTTGTACACTT CTTGTATTTGCTACATAAAAATCATTTCAAGGAATTACCAAAAGTAAGGA AGCCGAAAAGTAGTGATGACGTCAGAAATGCGGGAAAAGATGATGAGATT GAACTTGATTTGGAGGAGACGTTTAGTGAAGATTTTGAATTATTTCATGA ACTTTACAAAATGTTCCCCATGGAGTATGGGACCAAGGATGAATTATAGA CCAACATGTTTGTAGATCACAGAAAAAAAGCGTTCAAGATTAATTAGATT TCTATACTCAGTGTATCTTTCATTGGAGCTTTTGTAAAATCAGGATTATT TTGGCTAATTCCTTTTCTTTTCTTTGTTGTTTTAATTTTTCCTATGATTA TTTTGAAAAAGATTAAAATGAATGATCAATATATTGACAAATGCT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00062188TCONS_00062188Clytia hemisphaericatranscript
TCONS_00062189TCONS_00062189Clytia hemisphaericatranscript
TCONS_00062190TCONS_00062190Clytia hemisphaericatranscript
TCONS_00062191TCONS_00062191Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00062188-proteinTCONS_00062188-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_362supercontigscaffold_362:520831..525175 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.15 0.11 0.13 0.04 16.81 11.59 19.02 17.26 12.93 12.24 9.29 4.93 7.35 6.32 5.98 8.49 7.36 6.9 7.27 8.3 10.36 10.17 4.62 2.85 4.93 5.73 2 2.03 1.33 2.22