XLOC_039147 (gene) - C. hemisphaerica

Overview
NameXLOC_039147
Unique NameXLOC_039147
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_365:148152..157450-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_039147 ID=XLOC_039147|Name=XLOC_039147|organism=Clytia hemisphaerica|type=gene|length=9299bp|location=Sequence derived from alignment at scaffold_365:148152..157450- (Clytia hemisphaerica)
TGAGTCCATTTTTAGAATATTCTAGACCGTAGTACGCTCAAAGTCAAACG TACACTCCATAGTTTTCGCCCAAAAAAATTCTCCCCGCCGCCGTCCCCAG AAATACTTTCGCAGGAAAGGGATAGTAATTTCCATCATTTATCATTGTTA TTAATATTTCACCCTTTCTATCATTAGATGTACACTGGCTACTGGGTTTC CAACTTTACTACAATGGAAGAAATTGCAATTGACAATCTGCATTATTTAG GATACAAACCAAACGGGGATCAATTGATTTTAGATACCGAAGAAAAACCT TCCTATGAAGCAAAGACGGTAGCTATTGATTGTTTTTTGGCCTATATTTA TTGTCAGTACGTGTTTGAAATCATTAAACAAGTATACGATCTGAAGTACA GTTTTGGAGTTGCTCGAAAAATTCTGTTCAAAATCAACAATGGTGTTCTT ATTGATGATTTGAAGGGCATTTGCGAAAGAGAAAAATTGCAAGAAAGAAA AGATAAAGATGATGATTTCAACATACGAAAAGAAGATTTTACATCTAATC ATAATCACCACATACAACAACAACCCCCTCATGTGAACCAACATCAGTCT TTTCAAACTCCTTCAAACATGGACCATCATTCATCTAACCATCCTCTTAA TCGAGAGAATCCGCAAAAACCAACTGGCATCAGTCTTTATGATAATCAAC AACAGTCGCCAACGTATCCGTATTCTTCAAATGGACAACCACATTCAAAT CTACCACAAAACCAAGTTCGACCCATTGCTTATCCCCCAAGTTTGCCTCA AGGACAACAACCCTTTGGAAACCTAACACACCAACAATATTATCAGCCTC CGTCCTATCAAAACCCAGGCCTTCAAGCCACCGAACCTCAAAACTTCCAT AATTCTAATCTGAGTAATTATGGAAACACTCACCCACAGTCAAATCCGAC TGGTCATGATTTATATGGTGACGCGCTTGACGATTTGAGAGAAACTGAGG CAGACACTGCCAGTCCGCATTCAAGTGAAAGACCTACGCACCATCAAAGA GGTGATAACGTCAATCAACAAATGCATGGGTACTCCGCGCAACAAATGGA CCATAATGCCCATCAACAAGGTGGTATACCTCCCAATCAACAAATGCAAC CAGCAAGACCGGTACCCAAACCAAGACGGAACCCCCCAGCAAATTTAGGA AATATGCAAAATAATCCAGATTCAAATTTCAGTACAAATGAGATAACTGA AGAGCCTACCTTTGTTCCTTAGTTTGATTTCGCCGCACATTTTCTCAATC ACGTTTTAAATGAATGACTTCTCGTATGTTATGCACCCAGTAATTCAGTG TTTATGCGACGGAGAAAGTGGTCTAAGCATAATTTCACTTGGAATACATG CCGTCGTATGGCTTTCTTTTAAATGGTTTGCTTCGAAGGGACCCGTCGCA AAACGGGCTGGCGTAATACAATGGATTCTACATTATTTGGAAAACTCGTG TCGAATAGAAACTTAAATACAAAGGTTCGAGAGAACTCATTCGCATTGGA GTTAAGAGACATTTCAGAGGTATACCTTAAGGGAAGAAATTTTCGCGGAA TTTAATTTCGCGAATTTGGGTGTAATTCGCGAAATTAAATTCCGCGAAAC ACACCAAAATTGTTAAATCGCGAAATTAAATTCCGCGGAATTCGATTTTT TTCTTCTTCTTTTTTTTTGTTGTTTTTGACCAGGTATTACCAAAAAATAT GGACACAATTGATTTTTAAGCATTATAACGTGTATTTCTTATCAAATATT AACAAATATAAATAACTCCGTGATGGTTAAAAGTTAATTTAAGTTGATAA ATTCTTCTTAATCGTGAAATTAAATTCCGTGAAACTTTTGAAATCGGCTC ATTCGCGAAATTAAATTCCGCGAAATTTGCATTTTTGAAACTCTGATTCG CGAAATTAAATTCCGCGAAAATTTCTTCTCGCGAAAATTTCTACCCTTAA GGTATATAGAGACACGAGTGACTGTACTTAATTTTCCTACATATAGATTG AGTTTTGCTTTGCTTTTGTTATAATTTTTTGTATATAATATTTTTGTAGA TCATCTCTAATGAAATTGATTTTTGATTTCTTTAATTCAGGCAGTACTTA GTCATTTAAAAAAAAAACTCATATAATTCAAATGATACTAGGGGAACTTA ATTTTTTGCTTAAATTGAAGAAACGGAGAAATAATTTATCTCTTTTTTGG AATGAATCCATTCACTTTGAAAGTGCGCTCTGTTTTTGTTATTTGACGGT AAAACAATTCAGGCCCCCAGTCATAAAAAAATTGGAATATCAATCCCCAT CGACTTTTTACCCCGGGGGGGGGGGGNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNACTTTTTTCC CCGGGGGGGGGGGGTACTTAGGCAAATGGAGGGTACGGTATGTGCCGCCC TTATGGGTACCTTTTTTGGACTTCCAAACTCCTGCTAAGGGTCGGAAAAA TCCGAAAATCTAATTTCAGTCCCACTAACGGTCGGAAAAATAGGAAAATT TCAACTTTTTACCCCCTGAAAGATCGAAATTTGGTCAAAATTGGTCAAAT TTGTCCCGCTAAGGGTTGTAAAATTCCCAAAATTTCCCTTGGTTTTCTCC TTTTTAGTCCCGGTAAGGGTCCAAAGTTCGAAAGTTGGGCGGCACCCCCC GGCAGCTCGTAACCCTACTACCCCCGGGCTTTTTACCGACTACCGGGTCT TTGGGAAAGGGTGTCATGTGGAAACCACGGTCAAGGAATTCACTTTAAAA TTACACTGGCATTGTTTCCAGATTGTAGCAGCTAAGAGTGCACTTAAAGT GAAATTATCAAACAACCTTTACAATTCCAGAACTTTATGAGAAATTTTAT GTATTTTTATACACGTTTTTCTTTTGTAAGAACATCCAAAATTTTTAAAG CTTTGGGATTTTCTTAACCTTTTGAGTTTTAAGCCTAAAAATGCTCTTAA CATGTTCTTTACATTTTCGCCATTTTTTGACCATTTTTACCCATTTTCCT AAGAAATCGGGTGTCTATGAGTCCATAAAGCCTTAAAATGTTCTTAACTT GTTCTTAACATTTTGGCCGTCGAAGCCTTTATAGTTTATAGTTTGTTCTT ATAAAAAACGTGAATTGAAGCAAAACTTTATTACAGTTTCAATAAATGAC TATTAAATTGAATGAACTTTAGCACGTATATTAAATAAATAGTGTTATAA TATTCAAATACAGCTTTCAAAAGTTGATTAACTGTATGTCTCGTTTTAAA ACCCTGCTTAATCAACAAGCTGCCATATTCACACGCTCGTTAAAAAAAAA CAAGTTACGCCAAGTAACATGTTTTTTCTTTTATAAGCATAACGTTTATA ACCATATGCAGGCTCAGTTTTTGGTACCTAAACAATGGCTCTATTGTTTG AGAACAATAGTCTGCTAAGCATAATGCGAGCCTGATATAGGAACAAACAC TTGCTTATAAAAAAAACATGTAGTTTTAGATACTACAGTATATACTATTT TCATCGCTTTCGGGTAATAATTTATGATTTTTTAATTCCTGCTCGGAATA AGAGCTTGGTTTTGCTTTTTGGGCTAATGAACTAACACTTCCTTTTGCAG ATGAAGTATGCAGTAAATGATTTTCTTAAAAAAGATATTCCTTTTGCGTT CTATATAATTTGTCAATATTAGTTTCAAAATATTGATTTCGATTTTAATT GAGTAGGCACACATGATTTTATTAAAATTACATGACCTAAAATTTATTAA AAATTGCGTCCTAAAAAGATAAAGGTCTATCTCATATGATAACATCCAAA ATTTTTAAAGCCTTCGGGTGTTCTTAACTTTTTTAGCTTAGTTAGCTAAA GTTTTAAACCTAAAAATGTTCTTAACGTTCTTATTTTCACCATTTTGTGA GTATTTTTGTCGATTTTTAGGTGTTTTCGAATCTGCGAAGCCTTAAATTG TTCTTAACTTGTTTTTTAATATTTTGGCCATCGAAGCCTTATGTTCTTAT ATAGTTTGTTCTTATAAGAAATGTGTTTCCCATATCTATGTCTCTTTTCT TCCTCTGATATGTTTTGCAAAGAATACTACGGTTGAAGCTGGTGTACAAT TTTGTCATGAAATTTCCCAATAATTAATTATTTGATGGGTCTTTATTTAG AATCAAGTACTCGTTGGAAATTAATTTTTTAAACATCTAATTTATTGTTA TTTTACATAAGCGTAATATACTCTATACCAATATTGAAACAACTGGACCC TACTGTCCTAAAAGCTGATTAATATTTCAAGTGGTTTTTAATAAATCTTC ATTACGTTTAAAGTAATCGCAAGTGCAATAAATATAATTTTCGTTTTTCG AAATTAGTTTTGCTGAAGTTTCTTCATTAAATAAAACCTATACTGTATCA TATATCTAAGTATATCTATCGTAAAAGTAAACAAAGAAACAACTCCCAGT TGGGTCAAACCAAATGCTTGAAAATGACACTACAATCAGCCCCTAAATAT ATTGGCAATTTTAGGTATTTTAACGTTTTTCAGAATTTAAAGGTCGGGCG AGAATTGCAGTTTAAGTACTTCCACTCTGCTTCATTGGATTTTTCGATTC GGGAGGGGTTAAATGGCTTCCAGGCTATTATTTTCAGCCTTATTGGAACA TTTTTGAGCTTTTCGATGTTAAAATTCTAAGCTCCTTTAAGTCTTAAGTC TAATGTTCAAACGCAGAGTTAGAAATCTACTTCCGAACTGTACTTCAAAG CACTTAAAAATCACTTGCGGTTTTAAAGTTTTGAGGGAATTCCCCTTTTA TGCCCAATATTTCGGCGTCGATTATAGATGTCAAATGAATAGAAGGGTCA AGGATGAAAGGGGGGTTTCAGGGAAATGAGCGACTTTCGGGTAGACAGCT TTATGAAAAGGACGCATCTGGGCTTTGCCTCGACAGTGGTCACAAACTTA ATTTTTACTTAGCCCTAATTTGTAGTTGTTTACCTTGTAATGCTATTGAT TTAAAGGTTTTGTTTTTAAATAAGAGTGATAACGTTTGCTTACTCATCAA TTTTAATTTAAAAGCTTTTTCACATTGGATTGACATGGATGTGGAGCAAG ATTGGTCAGAAAGACGAAAAGCAAAACATTTTTTGCTTATATAAGCATAA AATAGCAATAGGTAGACACTGTCCTGATATGAAATATGTGTCTGATATGA AATGGGAACACTTTAAAGTGTAAAGACTATTAAAATTTATCCTCTATCTT TCTCTACACAGGTTGCTCTATTATTTTCAGTCATTTTTTAGATAAAACCT TTTTTGTAATTGGGGAAGGCTCCATTTCCCTCCTTCTAAAGATAGGAGGG CTGGCACTAATGAGGTCTTGATTGGCCTGAATTTCGGAGAATAACGTTTT TTATAAGAACAAACTATATAACAACATAAGGCATAAGGCTTCGATGGCCA AAATATTAAGAATATTTTTGAGGCTTTGCAGACCATAAAACACATTTTCG TAGGAAAATGGACAACAATACTAGAAAATAGTGAAAATAAGAACGTGTTA AAAACACTAATTTGAGGCTTGAAACTCGAAAAGTTAAGATCATCACAAAA TTTTGGGATGTTCTTATAAACAAGTGTAACGCCATCCCGAAAAGAAACTT AATCGAAATCTAAGGAAATTATTGGCCCTATCTTGCATATATTTGTTCTA GCCTGTCGCATCTTAAAATATATCATGTTTGATTGAAAAGTAATTTCATG TTGAGGTCCTATTATTATTATTTCAATTTTGAATAAAAACATGAAAATCA GCAGGCAGACTTCTTTGATTGCTTGAAATATAAAAAATTGTTTATCACAA TAAAATAATAAATATTTTTGATCCTCTATACGACATTTTGATGAACCGTA CCCTCAGTGCAATGGTTGTGAACCAACTTTGAATTAGAGTCTCCACGATT TTATGTGGAGGTCCTATTATTATTTCAATTTTGAGTAAAAACAATCAGCA GGCAGACTTAACTTTCTTCACTCTATGAAAAACAGACTGAAGAATTTTTT GTAAGAATATTATTTGACTTTACAGACTCTACCAGAGTATACTAATTGTA GCTGTAAATTGCACCTCAAAAAGTTCATCAAATACTCACAAATTCATGAG GATGAAAGATAAATTTAAGACCAAAAGGACACACCTGTCTCACAGCCCCG GTGAAACTTTTTTCCCACAGAAGGGATAAAAATTGTCCAAATCCCAATGG GGATAGAGATTCTAAAGTCCCAAGGTTAAACCATCCATTAGGGATGGTTT AGGAGTGCAATTTTAAAATATTGAGTCTCGAATGGGAATTAAATCAAATA GTGTGGTCGTGTTACAAAAGTACAGGCTGTTTGTAGAAAAAAAATAATAT ATAGCTGAAACTTTCTCCAGACCTTCTCTATAGGATGCTTATGCCTCAGG AAAAAATCCCCTAAAATCCCACTGGTGGAANNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTCCTGAGG CATAAGCATCCTATAGAGAAGGTCTGGAGAAAGTTTCAGCTATATATTAT TTTTTTCCTGTAAATTATGCTAAACGACCCCACTAAAAGTTAATGGGGCC AAACCCTGGTTGGCTGGGGTCTCAACGGTCAGTGACACAGGGGTGTAATA GGCCTTACACCTAAAAAGTTATGAGCATTTCTTTATTCTAATTGAAGATT TATAACACTTCTTCTATTTTATCATTTTCACTTATGATTTGAAGCTCATT AATCAGAATGTCAATATCGCAAAGTAATTTAGTATCAAGTGCAGATTTTC ACATGATAATATTGAAATTGTAAATCCAAATTTCAATATTTCTACACGTA AATAACAGATTAGAAATTCTTTTCACAAAATTATAACAATTGTTGAGTTA ATTATAACTATCACAGTTTTGTCTGTCTTAGAGGCAATTTTATCACGCCA TCACGAAAACCGCTTGGGGGGGGGGCTCGTCTTAGCTTTCTGTAACTAGG ATTCTCGAAGACATTTTCAGTTCATTTTTGAAGGAAGAGTACCCTTGATA AGAAAATATCCTGTACGTCAGTATTTTTTAAGGAAAATAATTTGTGTATT TATTTTTGAAAAAAGTGGTTTGTTCAGTATCCTTTATAGAAATTCTTTAT TTGCAAAAAATTGTTCTGTATTTTTGAAGGAAAAAATGAATACGAAACTG TCTATAAATAACCGTGTGCTCTACATATTTCTTTTATAAGTAACCAGGTT GCTAAGACTCGAGCCCTGAAATTCTCGTAAAGTAAAAGCTTTTTAGATAA TCTAAGCTTGGCAAACGATAGCCCTTGACCCAATAAACATACATATGGTG TGATGAGCCTGATGGTCAAAGCAAATTTTTCAGAAATTGAGCTAAAAAAC CAACCCCAAGCCTGACCCGAAAATTGGAGTTGCTTATAAAAAAATGTATA GTCATATAAGAAATGGCTATCCTGTGTTTTGAAGGAAAGCTTGTTATGTT ATTTTTCGAGGAAAATGTATTTTTGAGGGAAATGTATTTTTGAGGAAATA TATTTTTGAGAAAAATGTATTTTTGAGTGAAATGTAATTTTGAGGAAAAT GTATTGAGGGAAATATATCTTTGAGGAAAATGTATTTATGAGGAAAATGT ATTATTGAGGAAAATGTATTTTTGAGGAAAATGTATTTTTGAGGAAAATG TATTTTTGAGGAAAATGTATCTTTAAGGGAAATGTATTTTTGAGGAAAAT GTATTTTTGAGGAAAATGTATTTTTGAGGAAAATGTATCTTTAAGGGAAA TGTATTTTTGAGGAAAATGTATTTTTGAGGAAAATGTATTTTTGAGGAAA ATGTATTTTTGAGGAAAATGTATCTTTAAGGGAAATGTATTTTTGAGGAA AATGTATCTTTAAGGGAAATGTATTTTTGAGGAAGATGTATTTTTGAGGA AAATGTACTTTTAAGGAAAATGTACTTTTAAGGAAAATGTATTCGTGAGG GAATATAATAATGTTCTGAATATCCTTTGTCCTTTGAGGAAAATTTCACC TTGAACTTTTTTCCGCGCAAAGCATTGTGGGCAATTCTCGGAGGTGAAAT CTGAGTTTTCACGTTAAGCCGATATCGTCTATTGCAAAATAATACTGAAT ATTATATATCAGGCCCGGCGGAAAAACCCTTAAAGTGGGGTGACTGAAGG CTCAAAATAAGATAGAATTTGTTAGGAATTTGAGAAAAAAATCTCATTTG ATCGAAAGTGGGGAGGCTGGAGTCTTCCCAGTCTTCCCGCTATATTTTTT TCTAAATTATTTGAGTAAAACAGTAAAAGTCTTTAATTTCTCCATATAGC TAAGAAAGCTAACAAGGAAAAACATCTAGAAACTTGTTAAAGAGATGAAG CAAAAGAATTCTAGGAAGATAATTTCATGTTTACTGTAGATTGAATCGTA ATACAAACCTATTCTTTTGCAGCTCATCAAAAATAAATTTATTTCAAATT TCTTGTTTAATCAGCCATACAGTATTGACTCGTTCAACGTCAAGAGAAGG TTGGTACTTCTGAAGTGGATGGTCATCAAATTTTATCAGATGGTTAAAGA CCCATTTACATTTACAAATAATACGCCCACAGTAGACAACAAAGTCTTCA TTATTTGTTTACATTTATTTCGATGAAATAATAATTGAATCATTTTCTTT TTGAAATATTTTCTTGCTCCTTTTAACTTCCTTGTAGCTATATCCTTGT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00062482TCONS_00062482Clytia hemisphaericatranscript
TCONS_00062481TCONS_00062481Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00062481-proteinTCONS_00062481-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_365supercontigscaffold_365:148152..157450 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
19.46 18.14 16.01 16.56 42.5 33.22 25.95 29.74 17.46 19.71 15.21 11.32 15.44 14.91 19.16 18.73 28.48 22.63 19.09 23.41 22.18 22.87 17.57 18.25 25.17 25.82 14.45 12.14 13.43 13.97