XLOC_039171 (gene) - C. hemisphaerica

Overview
NameXLOC_039171
Unique NameXLOC_039171
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_367:35578..42173-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_039171 ID=XLOC_039171|Name=XLOC_039171|organism=Clytia hemisphaerica|type=gene|length=6596bp|location=Sequence derived from alignment at scaffold_367:35578..42173- (Clytia hemisphaerica)
GAAATGTTTGACAAATTCATTTGAAAACTTGTTCGACAAAATTTGACAAA AACAAGTGGTGGCATAAACATTATTTTTGTTCGGCCTAATGTCTGAAAAT ATTGAAGCTTTAAACAGAATCTGGAGTTTTTTTAAATATTCAACATGTAA ACTATTAAGAATCCTTGAAAGATCTGCTTTCTCTTAATTACCTTCTTACC TTACCTTCTTTTTCCTTTCAGGTAGACTAACAAGATACTATTAAGAATTA TGGGTAAGCTTTTTTCTGAATTATGGGGAGTCACATTTTATCATTTTGGG GATGTAAAAAATAAAAAAAATCTAAATTTTACAAGGCCTTTCTGGTGGAT TACAATTTCTATATAATATTTTTATAACAATAAGTTAGTGGCCATAATCA TTTTTATTTTATTATCTTTTCTAGGTTCATCAAAATCTGGATGGGAAAAG TTCTTCAAAGAAGCTGGTATTCCAGGGAAATTAGTTTCTGAGTAAGTAGA GGAAAATGAAGATGGTGAGGAAAATCAGAATGTATTCTCTCTATGATGAT TGAAAATAAAATCAATTTGATACATTTCTTTTTATTTTCGCAAATACAAT GCTTATTACTTGAAAATAAACCCTTAATAAGTGGACTAGAGGTGGTTTTG AAAAGATTTTAGCGCCTGCAGCGCGTATCAACCACCCACAATGGTTACCC CGAAGGCCAAAACTCAATTCCTAAGTCAAAAAACGGCCAGTGAGCAAAGT GCTTGGAATTTTGCCTGACCTAGTAGATTACCAGGCTATTCTATGGTAAA TTATGACCCTGTCTATATAGATTTCAAATATAAAAGGTGCAAAATTTCAC AGGGGTATATATTGTATTTGAGCTCTTCTGCAAAATTTTAAGATTTTAAC ATTTGGAACTTTATTTTGCCCAAATGACAATATTGGGAGTTTATGCCACT ATACTAAAGTGACTTTCTTTATTGGTTTTAAAGCATACACATTAACCCTT CTTCCTATCATATTTTGGAATTTTAGTCTTTGAAATGACTTGGTAGATGC CACCAAAATCTACTAAATTCACGAGCTTTTTATCCCCAAGTAAAAGAATA TAATACAAATAGAAAGGCCTTGTTTAGCCTTGTGTTGAAATTTATTGATT ATATTTTCTAGTTATGCAAATGTGTTTTGTGACAATCGAATGAGACTTGA TATGCTAGAAGAACTAAACAAGGTACCAACTTATATATTGATGGATTTAG ATTGCGTTTGTAATAGTTTCAAAGAATATTGTCAGCTTTAATTTACGTTA AATCTACTTTACAATGTATAATAATGTATAACTTAGTAAAAAGGTCTTTT GAAATTCTTTTTAGAAACCTCATATAATTAGTTATGAGCTTAATGAAGTA GTTTCTTTTGGTGTTTTAGGAGGTACTTCAAGAACTTGGAATCAAAGCTG TGGGAGATATCATTGCTATCCTCAGATATTCCAAGATTAAACAAAAAGAG GTAACATTAACAGTGTAACATTAAATACCGCGGCTTATCTCGCAGGATAA AATCAAAACAATTATTCTGAGAGATTTCATCACAAAGTGATTCTAATGCA TAGCTTAAATTGATAAAATGTAACGTTATTATAAACATTGCTGCATTTCT TTAAACGCAAGTTGAAAACTATTTCAATATATTTTTGAACATTAATCATC AATTTCCCCCAATTTTTTCAGTTATCAAGGAACCGCTCACCATCTCCTGA TGTAGAAGTTATTACTAAGAAAGCAGTTCCCAAGGCAGCCACATCATCCA ATAAGATGGCAGCTGCTGGTCCTAGAATACCTCCAAAATCTTCTAATTGT AAGTCGGGTTTTCAGACAAATTTGAATTAAATCAGAGGGCGGGGGTCGTT ACTAAAATCTGAGACATCATGTTGTTTAGTATTGAGGTGGTATACCGGAA AAAACTTTTCAGAAAATATGGTCTCGAGAAAACATAATTTGTCCTGAGAA AAACAAAATTGGGTAGTCTCTGTGTCAAAATGTCCCTAGAAAGTTTAGTA CATGTGTACTAAAATACCACTTGTCTAAAGTGGGGTAAATTTTTAAAAAC TTAATTTTAGTATACATATATGTCAGAGATTTTAGTACCCCCCCCCCCCT TAAATTTTGATTTCGAAAAAGAAAGCAAAAACAACAATCATTTCTGCAGT ACAAGCATTTTTATACAGTATCATGAATTATAATATCCAAGCAATAGGCT TGGGTTTAAAAATATTGATTGGTGGATAATTAACTCGAAATTTTGTATTC TATCGCAAATCTTTAAGATTGATAATATTCTTTAATATTTTCTCTAGTAT CGATGACAGTGAAAGCATCAGACTCTACATCATCATCTAGCTCCAAAAGC AGCAGCACCAAAACAAATCGAAAAACTTTATCGCAGCGTTTCAACGAATA CGAGAAAGACGCAAAACAAAAGAAAGTTGAAAATGAAGAACAAAAGGCTG AAGAGAAACAAACAATTAAACAAACAACATCGAATAGTATAAAAAGTAAC ACCACCACTGTGTTTACAATACAGTTGCCTTCCAAACCTCCATCCACTAA AACACAACCATTAGCTAAAAATCAACCTGCAGTCAGCAAACCACAAGCTC AACAAACAGTTCGACCTCAAAAAGTTACTCTAGTACCAGGTAATAAATGT ATTTTTTTGTAAAGATAACAATGTCTCTTTTTGATCAAGAAATGGAAACC CCTGTGTGCAGTATCTCAAGAAATCAAACATCTTTATTTCGCCATGAACG TTGTCAGGCAGTCTGCTGTAACAATAGCTTTCTCCTGAATTTGATTTATT GTCCCAATTGAAAAGGAGCTAAAATCAAGATTCTATACAACCAAGATAAG CCATAAAGTCTTAAAAAAAAAACTACTGCTGTTAACAGTTAGCAGTTGAC TCAATGTCACAAATTTTGTGAGAAAAGTGTCTTATTCTATACGGAATCCA TGATAATCATCGGGACCTATGATAACTTCTTTGTTCTATATAAAGCAAAA AAGGGGATCGACCATGGAATAGTAATTAACCAAAAATTCTTTCCATAGCG CAAGGAAAGACATTGAATCGTAACAAGCAGTCGACATCAATTTTCGATCG ATTGGATCGTCTCACTAAAGGTTCGCAAGAAGCTTCTACTACTACAACGT CATCAACGTCAACGTCTAAACAAAAGACTGAGACGACAAAAAAGGTTTGA TCATTTCTTCTGATCCGATGCTTGGTGTAAGATTGTTTAAATAAGATAGT TTCAGGTTTAGAATGGCACATGCTATAACCTTTTCGGGAATCTATATTCT ACATCTTCGTTTAGCAATTCAGAAAATTAAGCCTGTCTCAAAAGTATGTT GGCACTTCCTTTTTTAACGATTTCTCAGCACCCATTTATGCTATGTTAAA AAGCTGTACACCATTGGAAAGATATTTTCAAGGAAAATGATCTAAAAGAT AAAAGAGTGAAAAATTGGAAAAAGAAGAAAAGAAAAATTATGAAGATAAA AAAAGTGAAGATTTTTTCCACTGGTTCGAAAATCATGACATACCTTTTAG AATATTTGAACCTTGCTGATTTTAAATATGTGCTTGAAATTTTCGTATCT TTCTTAGAAAAAATTTACAGCAATTTGAAATTGGTCCATCTTTGCTGTCT TTGATCGTTTCTTGCTGTTTTAGGTGTAAAATGTTTCACATCTTCGTTCT TTCTCTCACAGACTGTTACAGTTGATCCCAAACAAGATGTGTTCAGTCGG TTAGGAACTTTACAAGATGATGAAGCAGAAGAATCTCCGCCTCCTAAAAA TGTTTTCAGTCGGTTAGGAGGAATGTAAAACATGAGGCTGAACAAACGTC TTTAATTGGTTCCGGGCACAATTACATCTCGCGTTGAGTTTTCTTGCGCT TTCAGAAGGATAAAGGAAGAAAGCTTGAAAAACATTGAGATTCATCGATT ACGCGACGCTCTTTGTGAGAACCAACGACAAGTAAAACAGTGATATCCTG GTTCTGTTGGATGGGTTAATGCAAGTGCAAAGCACTGGTTGCAAAAAAAT GGATAAATTATTGATGTTTTAGGCAGCTGTCAAGGCTTTAAAGCGTGAAA TAATAAAGGGAAAGTTTATCATTAAGGGATGTATAGAATATTTTGGGATA CCTTCACCGAACTGCCACCTGCTGGGATGAACATATCTTCATGATCTTGG ATTATAATAGCTATAATGAATTATAGCTAATTTTATACTTTTCAAATATT TTTATTTGCGAATTAGCAATTCATCAAAGTATTTTTATATTTACATTTTT ATTCATACCTGTTTTTATCTATAAATACTGCTATTTAGGATAATTCTGTT CAAAATTTTACTTGTATCATGTGACTTCTGTACCCTGTTAGAGCCTTGTG TGTTCGACCGATAGATTTCGATAGAAAACTATCTCAATTCAATAAAAATT CGCATGGAGAATTTGCTGAATCAAAATGCCGTTCATTTTTGGCTCAAAGT TTTAGATTTAAATTTTTGTTGGTGTTGAGTTTAAGCCTCTTTGTTCTTGC AGAAAACTGTGCTTATATATTTAAAGCTCAGATAAGTTTTGTTTTGTGAA CACAACCAAAAATTTGTTCGTGAAACAAACAAAAGTACTCACTTTCTGTA TAGAGGTCACGTTGATTGTTATTATAGACAATACTCAAACACTACAAGAG TAAGTGGTATGTATGGATATGATTAGTTCAACTGGTAAGGCTTTTATCCC TTTTATTACGAATCTACGAGGTGTTTTCAAGCTTTTCAAATGGTCCTTTA GATTTTGAAAATAGTAAAGACAAGTCACACTTTTTTTATATATGAACAGT TTTATAAGAACAATGAGGCTCAAAATCACCAAAAAAATAAGAACAATTTA AGAACAATGCTGAGCCTGAAATTACTCAATTTCAAGCAATTTAGGGGTTA AAGTATCGTAAAAATCGGGTATAGCGCCTAAAATATCTCAATTACACCTT ATAAATAACAACAGGATAAAAAACAATTTGAGGCTCAAAGTGCCAAAAAA AATAAGAACGGCCGAGCCTCAGAAAAATTTTACTGGTTCTTATAAAAAAA AGTGTATGTGAATACACATAGCATGGGTTATTTTGATCATTCTTTAGAAC AAATTTGGTGACGGAATCAATGCACAGCTTAATGACAACATTCTAAAGAC ATACGAAATGCTTTAAAATTCTTAAAATCAACCGCTTAAGATTATCTTTT CAACGAGGTATTACTTTTAATTATATCTTTTCTCATTCAAGAGCAATGTA TCAATGTGCGGACTGCCAATTTTTCTGGAACAGACTAAAAATGTTCTTAA CATGTTCTTATTTTCACCATTTTGTGAGCATTTCTGTTCATGAACATTTT AGAGTCCGCAAAGCCTTAAAATGTTCTTAACTTGTTCTTAACATTTTGAC CATGAAAGCCATGAAATAATGTTCTTATATAGTTTGTTCTTATAAAAAAA GATTTTTACATTTTTTAGATAATATAAAAATTCAAAAAACAAGTATGGCA AGTGTTGTGGTATACGTTGTGTTTTCAATCATGGCTTTCTTTTCATGTGC CACCATCTTTGTTGTAATGTCATCCAAATTTCAACACTCGTTCCCACTCT CCTTCCAATTTGAACAATCAAAAGACAGGAGATCTGTTGAAACTATGGAA ACACAGGTACATATGCTTAGAGATATTTTCCAAATAATTTCATCTGCTTT GAAGGGGGCCCCCAGCGGTTTGCGTGATTGCGTGAATGGGCTTTAGAACA TCCAAAAAATTTGAAGGAAATTGTGTGTTTCAGAGTCCGCAAAACCTGAT TTGAACTTGTCCTTAATTGTTTGCCTNNCCCAAACAAGATGTGTTCAGTC GGTTAGGAACTTTACAAGATGATGAAGCAGAAGAATCTCCGCCTCCTAAA AATGTTTTCAGTCGGTTAGGAGGAATGTAAAACATGAGGCTGAACAAACG TCTTTAATTGGTTCCGGGCACAATTACATCTCGCGTTGAGTTTTCTTGCG CTTTCAGAAGGATAAAGGAAGAAAGCTTGAAAAACATTGAGATTCATCGA TTACGCGACGCTCTTTGTGAGAACCAACGACAAGTAAAACAGTGATATCC TGGTTCTGTTGGATGGGTTAATGCAAGTGCAAAGCACTGGTTGCAAAAAA ATGGATAAATTATTGATGTTTTAGGCAGCTGTCAAGGCTTTAAAGCGTGA AATAATAAAGGGAAAGTTTATCATTAAGGGATGTATAGAATATTTTGGGA TACCTTCACCGAACTGCCACCTGCTGAGATGAACATATCTTCATGATCTT GGATTATAATAGCTATAATGAATTATAGCTAATTTTATACTTTTCAAATA TTTTTATTTGCGAATTAGCAATTCATCAAAGTATTTTTATATTTACATTT TTATTCATACCTGTTTTTATCTATAAATACTGCTATTTAGGATAATTCTG TTCAAAATTTTACTTGTATCATGTGACTTCTGTACCCTGTTAGAGC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00062511TCONS_00062511Clytia hemisphaericatranscript
TCONS_00062510TCONS_00062510Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00062510-proteinTCONS_00062510-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_367supercontigscaffold_367:35578..42173 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
18.8 19.52 8.45 7.54 28.01 24.15 29.51 31.29 23.16 23.09 19.67 18.76 15.57 15.54 19.96 22.56 29.16 24.64 13.7 14.38 19.22 17.81 31.48 31.84 15.18 15.81 17.3 14.1 26.03 23.92