XLOC_039238 (gene) - C. hemisphaerica

Overview
NameXLOC_039238
Unique NameXLOC_039238
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_370:34541..39856+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_039238 ID=XLOC_039238|Name=XLOC_039238|organism=Clytia hemisphaerica|type=gene|length=5316bp|location=Sequence derived from alignment at scaffold_370:34541..39856+ (Clytia hemisphaerica)
ATCAACACATCAGTATCATTAAGGTATCCTCATGAtatgattttctgaaa aactttgATTATCCATATAACTTTAAGGGGAGGTTCNCCAATCAACACAT CAGTATCATTAAGGTATCCTCATGAtatgattttctgaaaaactttgATT ATCCATATAACTGTAAGGGGAGGTTCATTGACAAAGTTTGGTTAACACAT CAGCAAAGTTCTTTGAAGCAAGTTTTCTAAATTTCTAGTTTTGCTGTTTT GGACTGggttaaaatcctaaaaaatttctattttaagcaattttgtgAAG CGAATACTGGTAATAGACCCAATGAACCTCTTTCAAGAGAGAATATACTA TCATTTATGTTAACATTGGGAGTGAATAATGCCTTGAAAGATAGGAAAAA AATCCTGTTGACACCTCGGTTTTGAGGGGGTTGCATCAAATTTTGAGAGA GGGTTGCTCTAGTCTAGGGGTAATGGTCCCCTTCTGAACAACGAACCTAA ATATCATGTTTGTTTCTATGCTTATAAGTGTTATACTTGTATAAGAAAAC ATGTAGTAAACTACTTTCTGCCATTTTACCTTAAGTGATGAGGTGGATTT TAACCAAGAATACACAACAGATAGAAATCAAGAGATCCTGCACATTCCGA GGTAAGTTTGGTGGGAACATTGTGATCTTTTGGCCAGGAAAGTGATTTAT TATGGTTATCTGCAGTCATGAGATTGGTTGGATGAATAATAATTATACCG GGTGTCTGTGAAAAAACTTCCNTGCACATTCCGAGGTAAGTTTGGTGGGA ACATTGTGATCTTTTGGCCAGGAAAGCGATTTATTATTATGGTTATCTGC AGTCATGAGATTGGTTGGATGAATAATAATTATACCGGGTGtgaaaaaac ttccccctgtttgattcaaaatttcgaaaaagtgaaaaatatattagctt gattttttcgaaatcgtttagaAGAGGGTTTAACTTAAGTTAAACTAATA Tatgttttcactttttcgcaattttgaatcaaacagggggaagttttttc aCAGACACCTGGTATGAATTGTATTATTCATTTGAGATTTTATAACTTAT TACATCTTACAGTGACAATGACAGTGATGTTGACGTTGTTAATGTGACTC AATTTGAAAGTGGCaacaatcaaaatcaacaaAGCTATAATCGTCTCACA GAAAGGTAAACAATTACATTTCTTAATATGAAAACTTAACCCCTGCTGCa cctctttttaaaatttttcttgactCCCCTCCACAGTGTTATCTCATATT TTAATTCCAGAATTTTTGCTTCGTTCTTTTGTTTGCTCCTTTTTAGGATA TTTTCCTTTAATGTCTATTATTTGCTCTCATTTCTAATCAACATCTAGCT TGTGtgagtttttaattttaagttaATACAAAATGAAGGTCTTTCCAATA TATCTTACTAACTGACCAAGTAAGCATACAAATTTATTAATATTTCAGGA CAGTTGAACTTGATGAAGATCACATTTTCAATAACAGAGACGAAGATAAA GAAAACAACAATCAAGAAAGTGAAAGGTATTATCtagatttgaatttaaa ttttcaattgtgACCTTTCACTTAAACGTGTATTCGACTTTACTGAATTT GATTTCATattaaaataaaagataaacTCTCAGGGCAGAAATAGATTTTA AAACATGACTGATTattgtttctaaatttttatttaagcaTTCCTGCTTG TGATCCTGATCCCCAAATTAAAACTACACAACCCATCGACAACGTGACAG CATTAAAGATGATCTTCGATGCAAACCCTGATGTTGTTTCAAGTTCTCTG CCAAAGCATATTGAGAAGAAtgcatattttttattgaaacttgATTCTTC AACAGATGAGTATTACGATGGTTATAACTGGAGACAAACAAGTGGAGAAT CTGTGAAGTACTACCatattgatgaaaatgataaagTGGTATCAGGGAAG AACAAAAACTGGTTCAAAGTTAGTAGGATTCGTTCTAAAAATACGTCAGC TGCTGATTTTAACAGACTGATAATAACTGTTGAAAACTCATTCAAAGTGC GGTGTGAGTTTGCTGTTGTTCAATACAGGTTTGATGATAAACCACACAAA ATCACGATCAAGCCTCATGGCAATTCTTCTTTAACTATACCAAACATTCC TGTAAAGAAGTCAGTATTGGAAAGGGTTACTCAAGAGGTGAGAAtgcaaa aacattcaaataaaCATGTTCTACATAAACTTGAAAGTGAGAATGGAGGG CTGTTGGCTGATCCTGGAGATGTGCCAAGGAACGAACGCCAAATCAAATA CGTTAAATCAAAAGAGAAGCGAGGAATGAATGATGTTATCGCAGATGTGC TAGTGTTACAAAAGGAAATGAGTCATTTTGTTCAAAGGGTAAGAATGTTT CCTCGTCTGTTTATTTCAATCTTGTTTGTCCCTCTTTTTTGTTATTAGCG GTATAAACTAGTTCCACGATAGAACACTATTACTAAATATATCAAGGAAA TCTTTATTAAGAGTTGATAAAAAGTTGCACAAGCCACAAAACTCTTGCGT AACTAGGGGTCAAGCAATTGGTTCCAGACATCATAATGACTAAGTATAAA TACTCACCACCCCTTTATAGTGAGCACATGCCCCCTTAAAGGAATTTTTG GATCAAATTTATGGGGCaatttaaaatttgaggggTGGTTTGAAGAAAAA TTGGGGGTGGTTAAAGNCAAATTTATGGGGCaatttaaaatttgaggggT GGTTTGAAGAAAAATTGGGGTGGTTAAAGATCAAGGGGAGGGGGCTTGTG GAAATCTTTCCTCTCAAACACTTGATAGTTTGTTATGCAAAAAGCAATAA ACTAATTGACATAACAAAGACTTTgagttgagaaaaaaataaagggTGAT ATTTTGCGAGGGGTTTGGTCCACACTTAGTGATGAGATTTTATCTCCCCC AAGTACcttagctccccccaaaaaagtgcTGCAATTCCACCCCCTCCCCC GTTGTAACGGGGTCTGGTGCTGTGCATAAATTTGTGTGttgcatttttgt tttaatCATAATTTTATCCTTTAGGTATTTGTTGATGAAAACACGCCCAC GGTTATACTATACACAAAAGAGCAAGTCGATTCTCTTGCAAAATTTTGCA CTCCACCTGAAAACGTGCAATGTTCAGTATTAAACTGTGATATGACATTC AATCTTGGTGATTTTTGGGTCGTAATTACGACTTTCTCAAATTTGATGGT TTATTCCAAAAGGTATGGAAGACCTATAACTGCTATTGGCCCTGTCATGG TGTGTTACCGCAAAACCACTAAGCAGTATCGATCTTTTTTCCACGAAATG GTTGCGGAGGAGCCAAAGCTTGGAGAGCTACGTGCTTTTGGACAAGATGG AGAAAAAGCAATATTTGACGCTCACAGCAAAGAGTTCCCATTTGCCATTA GTTTCATTTGTTCCATTCATATCAAGGGTAATATGGAAGAGTATATCAAA TCAACACTCCATCTGAGTGACCAGTTCTATGATGTAGTGATCGCAGATGT CTTTGGTACTGATACTCGTGAGGGGCTGTACCATGCATGCTATCGGGctg aatttgatgaaaatttggcACGGTTGAAAACTAAATGGAACAACCTCGAA ACAGAAGAACGGAGATCAAAGAATGATCAGAGTCGACCtgcttttttcaa atatttcgaaaaaaacaagaaagagaTTGTATACAACTACTGCAGGCGAT TGCTGTTAGTTCAGGCAAATGTCTACCAGCACAAtcaattttcaacaaat tcTACAGAATCAATCAACAAGGCGATTAAAGTCTGGACAGACAATCACAA GGATGATCTTCCAGGTTTTATGGTGGCTATTCATGATTTCATCCAGCACC AGTACAGTGAAATGAAGAAGCCGCTGCTGAACAAACTTTCTGATACAATG ATGGTGAATCCCGGATACCGAGAACATGTTGTGTCTGGTTATGACAAAAA ATCAGGTAAAATTGCATGATTTCCTATCTCAATCTTTGGCATTTAACCCT ATTTGTATCAGGGGGTGAAATCCACCAGGCTGGTGAAGTGCTCTGAAACT ttctaaaaaaggtttttgcaaatttttgtgaTTATTACCACCAGGTCGGA TTTTATGACTTTATAGTGAGAACATACCGTAAAATTCAACtataaaattc cttaaaatCTTGTAATCTTAAATATATAAACTTTTGATAATCTTCAAAAT TGTTTCAATCTTTGACAGATTTTAGATAGAAATGAGAGGATTTAgaagat cttttttttttacagctGACGAAAAGAATCGTGTATTGACAAGAATTCCC TGTTCTATCCCACTCAAGGAGATCTCTGTGCCAATTATAGCAAGTGCAAC AGAAGTTGTTGATCAAGAGCCAGAGTTATTTGATTTAAGTCTTTTGGAGG AACACATGTCTGGAACCattattcaaaatattgaacaaaaagccAACCGG ATCAAAGGTATTGATTTGTTTGATTATGTTGTTACATATTGTGCTCACCC CTTTATATAAAGGTAGCCCGACTGGCTGAGGTTGGATGGATTTTGGAACA TTACGTCACAATTTTAGACGaatcaaatggctaaaaatagATCATCCGAC GTTCGAAAATCTATCCCACCTTACCTAGCCTGACCAGCCTGCCTCCATAT TAACAGCCCCTTAATCGGACCTGTTTTGTCCAATCAAATTCTCACagttt ttacgattttcatGAAGGCTCGAGTAATCAATTTTATCGAATTTCTGTCG TTCAATTAAGTTTGATTGTTATACTGTTCGCTCAAAAATCTCTGTCTGGA TTAATTAGcatcaaaattttgttgtttgcatATCAGGTAAAATGAGAGAT GGTTTTACAGGACCCAAGTCGAGGATTTTTGGGAGTGAAAATGGAACTGA TGTGTACTTTGTCAATGCCACTGCAAATGGAAATTTCACCTGTACATGTT TGATGTTCAAGACTTACAGCGTCTGTTCCCATTCGCTTCTTTCTGCTCAT GACAACAAATGCCTGCAACAGTTCATCAAGTTGTCATTGAAAAAACCAAC GAAATTAACACCCGCTGCTACCTTTGGTGCAAATAAAAACGCAGGAAAAA AGCCAAATCAGTCGGTTCGCTCAAGGAAGAGGAAATCAACGACTGCTGAA ACTGTGCCTCAAAAACGGATGACTCTTGATGAAGTCTTGAAAGATACAGA AGCGGATGAAGAGGTG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00062612TCONS_00062612Clytia hemisphaericatranscript
TCONS_00062613TCONS_00062613Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00062613-proteinTCONS_00062613-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_370supercontigscaffold_370:34541..39856 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.67 0.4 0.16 0.11 2.68 2 1.6 2.26 1.09 1.73 1.05 1.49 1.17 1.29 0.74 0.95 0.51 0.68 0.44 0.5 0.78 0.77 0.61 0.59 1.19 1.96 0.14 0.19 0.37 0.41