XLOC_039438 (gene) - C. hemisphaerica

Overview
NameXLOC_039438
Unique NameXLOC_039438
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_375:269121..272348+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_039438 ID=XLOC_039438|Name=XLOC_039438|organism=Clytia hemisphaerica|type=gene|length=3228bp|location=Sequence derived from alignment at scaffold_375:269121..272348+ (Clytia hemisphaerica)
TGTCCTAAACCGCACATAGTGTCATTAAGCCAAGGTAAACAGGTAAATGG
CAGAAAGAATCACCCCCaataccaaaaaaatgttttttcacaaAACAAAT
TTCGATTGAAACTTTGTTTAATGTTTGATAATCATAAGAAAGTACTTCAG
ACGTATTAAATGTCAGGCTTTTATGAAGCAAGCATCGCGCTCTTTTCTCG
ATATATATAATGCACGTGGAGGAATACTGCAGACGGTTGGTCACAGGTga
gtcaaaatttacttttctgaatttttcaaaacaatcttAGTACTAAGTTT
TGTACGATCTTTCATGTATGGTTTTCATTATCAATCAAAGAAGTTCTGGG
TTCTACCGCTGCGAAATACCTCCGGGAATTTAATGATAATAAAAAGTGCA
CGGATCCTAAGCTAATTTTCACCAAGTTGGCTTCCAATCGAGTTTTTACA
ACGTAAAATATGTgtaactttatttttattttggttgacAATTCGGTTTT
TGAAGAATATACAGGAAAATCTAAGCAAAAAGCCCTCActtcaaaagtca
aatttttgaaggTTCGTGGAAAAACAAACATTAAAATGTTAACATGGTGG
TCAAAAAGAGTTTTAGAATGTCAGTGAATTTGAAAGAATGATTTGGCTAA
TAATTGTTTGCAAAACAGTGCAGTGGCCCGTTCAAAGAGAATTTGTGATG
TctggtaaaaaattatattatgtATTTCTTATTCCGCAATGATTTTACAG
AGCTAGCCCAGCTGGcagacaacgttgtttcaacgtttatataatgttca
taacgtccatataacgttagatgaacgttgtcTGCCAGCTGGCAGAGTGA
AATAATAATCAATTTATCAATCGATTTATTTGACGGTTTCTATGATTCAT
TTGCTATagttttgatcacgtgatcaaaattataaatattcattttttaa
tgactttGTGACATAATTAACATAATTTATTACAAATATGGTGATGGAAT
GCCTTTAATTGCTTCAGTAATTTAATTGGATCATAAAGTTAATGTAATGA
CGACAGTTCTTAGTCACTCAAGGACGTGTCGAGTCGCTTTAAGATTGTAA
ACATTTGAAGCTGAGGAAAGGTGCCTGATTTTCAACTCTATAAAGCTTAT
TCAGATGCATGAACATTGATGACACtgacaaccctgtctcacagccccga
tggaacttttttcctcagtggggataaaaattcctattgataTCCTAATA
GAATATAGAAATTCTATcgtttcaaggttaaaaaacctAGGGGATGGTTT
AGGAGTGCAGTTTTTAAACATGTAATTTCGattggggatgaaatcaaatt
caatttcccaatggggctgaaattcaagggtatttttccaccgaagacga
acttttatttttttatttttcagtggGGGTGGGGTCCCGACGGGTCTGTG
ACATAGGGATGTACATTGGTTGCTTGCttgctttttaacttttttaaatt
ttaaacatattgttttataagaacaaactatatgagaacataaggcttta
atAGCCAAAATACTAAGGACAAGACGAGAACATTTCAAAgctttatggac
tctaaaatgtctaatttcttaggaaattgcactaaaatactcataaaatt
tacgaaattaagaacatcttaagaataattttaggctgaaaacttaaaaa
gttaaaaacatccgaaggctttagaaactttggatgttcttataaaaaaa
aggggTAGCAATTTTTCAAACGATGCTTTATTAAACAagagtgccttcag
aggttcagaacttaaaaaagttgaagattcttataaaaagcatcgttgaa
aagataatcaaaagcatcgttgaaaagataatcaaaaGCACTAAAAGTTG
TCAAAATCTTTAGGTGCAACAAGTCCAAAAAGCCGTGGGCTTGAAAGAAC
ATAAACCACGCTctaaaaataatagaaattgtaaaataaaactgcgaaaa
tttctGGAATAAAGCCTGGACATTTTTTCGAATCTCAACTTAAAATTTTA
CcactaaaacttgaaaaaatgcGGAAAGGGTTGAATACACACTTTATTAA
CAGAATGAAATTTAGAGACCTTTCCACTAAATTTTTTGGCAATCTTTCAG
ACTTTTATTCGCACTTCTTTTTACTGGATGGGTATGGCTAAAATAAGACT
TTGGTTTCACACTTAACCATTTACGTAAACTAAATTCAAGGTGCCAAAAA
AAGCTGAAGATTTGAGGGTacaatttgacaaaaatagattttcggcaaat
gaaaaattcattattttagattaaatttttgattttaacacTATACACNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAA
TCAAAACATTATTACATCGAGAAGTTTACATAAGAAATTTTCAtggtttt
attctttttgtagAAACACAACGGAGTTTTGCGAAGATAATTGACGAAAA
ATAACGATGCTTCGAAATTTATTGGTGATTTTCTTGTTATGTTCGTTTGA
AGTGGAAATGAATGATGCAGTACCGTTATCAAAATTATCTAAAATGATGG
CTGACCTACCCTTTCGAAGCCGCCATACACCGTGTGGGAAAATTGTTTGC
GTTAAACTGGACGATGATCGGAATTGTATACAATATGGCTATCATTGCTG
ACATCATGAAACTTTGACAAAATGTGAGGACAAACTTTTGCTCGAAAAAT
ATATAGTTATAAATTTTCTGTACATAATAATATGATACAAACTCGTTGTT
ATTTATCTACATATATATAaaacacaaaatataaaaaatacaagaaacta
aaaaaccTAACGTGACAAATTTTAGGAGAATCCTTGGTGAGGCAGGAGAC
TACGTTGAGTCGGGAAGGGTACGCTCAT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00062964TCONS_00062964Clytia hemisphaericatranscript
TCONS_00062965TCONS_00062965Clytia hemisphaericatranscript
TCONS_00062966TCONS_00062966Clytia hemisphaericatranscript
TCONS_00062967TCONS_00062967Clytia hemisphaericatranscript
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_375supercontigscaffold_375:269121..272348 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.33	0.14	0.08	0.24	0.43	0.3	4.06	4.28	5.44	3.26	5.28	12.05	4.56	5.32	7.23	4.84	1.01	1.99	3.7	4.2	1.47	1.52	0.38	0.65	0.9	1.18	0.58	0.35	0.31	1.04