XLOC_040045 (gene) - C. hemisphaerica

Overview
NameXLOC_040045
Unique NameXLOC_040045
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_404:247601..251196+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_040045 ID=XLOC_040045|Name=XLOC_040045|organism=Clytia hemisphaerica|type=gene|length=3596bp|location=Sequence derived from alignment at scaffold_404:247601..251196+ (Clytia hemisphaerica)
CTCAAAATTACGCAAACACGTGATTGCATTTTAGATGTGACTGCGCATTG
CATATTTTATGGCGATTCCCTGGATTGATGTAAACAAAACTCCAATCATT
GCCCTGTTATGAACTTAAACGTGCTATGAGAGTGCACAAGTCACATATCA
AAGGCAAAAGGTGACCCCAAACCAGCAAACTAGTCAGAAATAAATGAGCT
GAGCTGACCAGAAACAACATACACAAATATGCCTCCAGTCAGATCATTTT
TACGAACTGGTCAAGTCAGATTCAGCAGTGGtaagatttttctttctttt
gagttTCTGGCATGATCCTCTTCATCTTCAATCCAgaacaagaaaaataa
tatgTATATACAACATGGGTTGgagattttttcattcaatcaaaatgcaG
TTAAATAAAGAAGAGTTACTTTATATGTATTCTCGTGTTGATTTCATTTG
ATATAAAAAATTACTTACTTTACTACTTACTATACTTTGTATGGTGCCGA
AGAGTAGGAACAACAACCCTGCTGGACACAGCCGCACATTTTACAGTGGG
GCTTGATCTAAATGTCCAGTGGGAACTTTGGGTTATGTTAAAAAACGCTG
TACATTTTCCCACCGTACATCACCGTACAATGTACAGCGATGTCCAGACC
AGGGTCGTTATAGATAGGAACATTTTACACCAGACATTTTGTGTCCTGTG
GCTTTTGTAAGTTTGATAGATTGGCAGGGTTGTCCACGTCCATCTATCAG
GCGgtaaactaaaaaaattgactgGGGATTTTGTGCGTTTTCAGTGAAGA
TGTTCTCCTCATAAGCTGCAATtgcccaaaaaatcaaaaaccaaaCCCAA
AAGAGTTACATTTCAAGAATTTAGCAAAAACGCCAAAGACCTTGTAAAAT
AAGGAATCTTGTGAAAGTTTACCTTTGCTGTTTTGGGAGGGTGACACTCA
CTATAATTTCTGATTTTAGATTATAGGACTGTTGTAGAATGGCATTACCT
AGAGGAAAAATGGTACATCGCCCATTATAAGTTTAAAAATGATCATtatg
attttaatttcaatcaattttttttttagtttctgaTCTTACAAGTGGAC
ACACTCAAGATGCACCAATGAAACCCTTACTATCTCATAATCATAATGCT
GGGGTCTTACCAGAGTCAAATTTATCTAATGCGAAACCGACAAAGACACA
ACAACATGGCACCAGCTCTAATTACATGGACCttaatgaattttttcaaa
aagttgaaaaatcttctgATGACATGTCATCTAATCCAGGGGATTTGGAT
CCAGACTACCCCAAACCCACTGTCGATCTTCTAGCAAGTCTTCTTACACT
TggaaaaatgattcaaaatcaGAAACAACTTATTCAGAGACAGACTAAAC
CTATTGTAGCTCCTGGTATCACACCTACTCAAGAATTGAATGACATGATG
GATATAGAAACCGAGATTTCCAGTTCTTCAAGGCAGGATGCATTTCCAAA
CAATTCTTTAGATGATCTTAATAATATGTATCGAGAAATGGATAAAGAAC
CATCAATATCATCATCAAACACAAGCATCAATTCAAAACGTCAGGTTGTC
CCTGAAGACATTAAAGATATGGATTATTGGAACCGTAGAAAACGTAACAA
TTTAGCAGCAAAAAAGTCTCGNTCACTATAATTTCTGATTTTAGATTATA
GGACTGTTGTAGAATGGCATTACCTAGAGGAAAAATGGTACATCGCCCAT
TATAAGTTTAAAAATGATCATtatgattttaatttcaatcaatttttttt
ttagtttctgaTCTTACAAGTGGACACACTCAAGATGCACCAATGAAACC
CTTACTATCTCATAATCATAATGCTGGGGTCTTACCAGAGTCAAATTTAT
CTAATGCGAAACCGACAAAGACACAACAACATGGCACCAGCTCTAATTAC
ATGGACCttaatgaattttttcaaaaagttgaaaaatcttctgATGACAT
GTCATCTAATCCAGGGGATTTGGATCCAGACTACCCCAAACCCACTGTCG
ATCTTCTAGCAAGTCTTCTTACACTTggaaaaatgattcaaaatcaGAAA
CAACTTATTCAGAGACAGACTAAACCTATTGTAGCTCCTGGTATCACACC
TACTCAAGAATTGAATGACATGATGGATATAGAAACCGAGATTTCCAGTT
CTTCAAGGCAGGATGCATTTCCAAACAATTCTTTAGATGATCTTAATAAT
ATGTATCAAGAAATGGATAAAGAACCATCAATATCATCATCAAACACAAG
CATTAATTCAAAACGTCAGGTTGTCCCTGAAGACATTAAAGATATGGATT
ATTGGAACCGTAGAAAACGTAACAATTTAGCAGCAAAAAAGTCTCGGGAA
GAGCGTAGGAAGAAAGAACTTGAAGTAGTAGAAACAACAAAAcaccttga
aaaagaaaactctCAGCTAACTTTAATATTAAAACGTCTCACTTCAAGGA
ATGAGTGGCTTGAATCAAGACTTCAAGATATTCGAAACCGTAGAAGGACT
GATCAATCTATTGAATCATCTTCACTTTCGTCTTCGGCTGAAGAAAGCTG
AATCGTTTAATgttggatttcatttttaaataattttattaCTGACTTGT
TGTTTTCTATTTGTTGGGGCAGTATGATGAGCTTGAGACCTATAAACTTA
ATATTTTTGAGCCATTCTGAGTTTGAATAATGATTGACATCTTAGCACAA
AATACTTTTACTTGATTCATACAAGTTaccttttaaagatttttaaggaT
ACAATATATACAAAATATATAGATTTTTAAAACTACATGTATTATCCAAA
TTTTCTTTGTACATTTCAGTAAGTAAATCACCCTTGATCACACCTTACCC
AGTAAAACTGTTGATAATTTATTGAATTTACTGTAATCCTTTTCTTTCTA
ATTCACTTTGTTAGCAGATTTAGTACCTAGTTGGATTTTATAGAtatttt
taattagattttttaagactgttttttttaCTCTAACTGCCATTTGTTAT
TTGCTCTGCTCCTACCTTGGGATTTAGATTCTGAAAAGCTCTCGTTTATT
TTGACaagcttatttttttattggtcAACTTTAACAATCGCATTTCATTT
TCGCTTAAATCTACTCTCCCAGAAATGTTCTAACACTTAGAATAGTTTAC
ATTTAGGGCAAAAACAGTGGGATGTTTTTACTGCTTTATTTGATAGGTTT
CTGATATGCCATTTTGTTAATATTCgcagtatatatttttttcttgatat
CCTCGCATTATCTCTATCGTGAACATATTGTTTATTagtgtatcaaaagt
tatttatgagagatgttattataatataaaGATTGCTATCGTAGATTCTT
CCTTGGATGCATACCTGGGTTgatctttttcctttttccaattttttgga
ttttgatgGACCCAACACAGCTGTTttacccaatgaagtataagcccgaa
gggctagaagtcaatctccttggtaggatttgaagccaacaaatcctacc
aaagttgtgcggccttgagcggctcgcctggtttttacacaaatga
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00063876TCONS_00063876Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00063876-proteinTCONS_00063876-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_404supercontigscaffold_404:247601..251196 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
74.17	76.28	13.8	7.62	115.36	86.63	60.78	63.7	24.07	18.35	28.83	30.48	51.49	65.69	29.38	83.29	17.28	80.64	36.26	28.58	83.59	86.38	94.24	97.15	81.28	70.98	80.65	73.47	98.73	65.48