XLOC_040069 (gene) - C. hemisphaerica

Overview
NameXLOC_040069
Unique NameXLOC_040069
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_404:278665..279907-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_040069 ID=XLOC_040069|Name=XLOC_040069|organism=Clytia hemisphaerica|type=gene|length=1243bp|location=Sequence derived from alignment at scaffold_404:278665..279907- (Clytia hemisphaerica)
TGCCTCTTCAAATCATTTGGGAATTAATTGGAGGGTGTGTTTTCGAAACT TTTATAACGAAAATTCATCTCGTAAAATCGTATTGAGTTAAAGAGAAGAG AAGTGTTGGGGTGTTGACACGTTGCAGTTGGTTGGACACGAGAAGTGAAA CATCTTGCTCTCGTACAAAATGCCTGGTAAAGGTGATTATAATGTTTCAT ATCTTACATTCTAAATACATATCTTTTGTGAACACTAAATTCTATCCATG ATCTACACACTCAAAGGCTTGTGACACTTGTCTCAGTGGACAGAGTGGAT GGGCTTTTTGGTTTTTTATTTGGATTCGTATTTGTTTTCCTTACGATGAT CTACCATAATTTTGTAAATTAATAAACTTAGCCCTTTTTGTCCCTTTGAG TTTATTCTTAACCCTTTAGGAAAAGGAGCTTTGTTACATCATGCCAAGAG CATGGGAAAACGTACGAGATCACAGAAAGCAGGAGTACAATTCCCTGTTG GAAGGATTCACAGATGTCTGAAAAAAGGTGACTGATTCCTTATCTGGGAT TTAACCTTTGATTTTTCTAGCTCTGACTTTTAACTGAGAATCTGCGTGAT ATTGCTGGAGTTTCTAAAATAAAATGTTAAACTTTTTGTAGTAACTTATT TCCTAGGTTCCCAAAAAAAAATAGAGTTTATCTAAATCTAACAATAAAGA TAATTTTCCATCCCTAAATTTTCCTAAACTTTTTTTTTCAGGGCATTATG CTAACCGTATCGGAAGTGGAGCACCCGTATATTTGGCAGCCGTTCTCGAA TACCTGACTGCAGAAATCCTCGAGCTGGCAGGTAACGCGGCCCGCGACAA CAAACGAAAACGTATAATCCCTCGACATTTATCTTTGGCCATCCGAAACG ATGAAGAATTAAATGAACTGTTAAAAGGAGTAACTATCGCTGAAGGAGGA GTTTTACCAAATATCCAATCAAGTCTTTTACCAAAGAAAGTACAAAAAAA CAATGACAGTCAAAGTCAAGTTTACTGAAAACGTGGATATGTTCTGTTCG AGAGTTTGGTTTGCTTTTTTGTTGTTTCAGCGTTTATTCACAGATTGCGA TATTCGGTTTCTAGGTTATCATTTCTAAAGTATTTCAAATTGATAGTATT TTTAACTGAAATTTTATACACAATATATGTAAAGTCAATTCTACATTCTT CTCACAAAATTGAAATTCTATTTACAGTGTGTCCGAAAAAAAT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00063929TCONS_00063929Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00063929-proteinTCONS_00063929-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_404supercontigscaffold_404:278665..279907 -
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
HIST2H2AA3histone H2A type 2-A Homo Sapiens
HIST2H2AA4histone H2A type 2-A Homo Sapiens
H2AFXhistone H2AX Homo Sapiens
H2AFJhistone H2A.J Homo Sapiens
HIST3H2Ahistone H2A type 3 Homo Sapiens
HIST2H2ABhistone H2A type 2-B Homo Sapiens
HIST2H2AChistone H2A type 2-C Homo Sapiens
HIST1H2AMhistone H2A type 1 Homo Sapiens
HIST1H2ALhistone H2A type 1 Homo Sapiens
HIST1H2AIhistone H2A type 1 Homo Sapiens
HIST1H2AHhistone H2A type 1-H Homo Sapiens
HIST1H2AKhistone H2A type 1 Homo Sapiens
HIST1H2AJhistone cluster 1, H2aj Homo Sapiens
HIST1H2AEhistone H2A type 1-B/E Homo Sapiens
HIST1H2ADhistone H2A type 1-D Homo Sapiens
HIST1H2AGhistone H2A type 1 Homo Sapiens
HIST1H2AAhistone H2A type 1-A Homo Sapiens
HIST1H2AChistone H2A type 1-C Homo Sapiens
HIST1H2ABhistone H2A type 1-B/E Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
262.95 256.18 68.42 45.23 1.07 1.43 0.63 1.1 0.21 0.64 0 0 0.2 0.08 0 0.11 0.09 0 0 0 0.76 0.34 162.92 110.95 0.07 0.12 8.84 13.36 82.33 97.17