XLOC_040073 (gene) - C. hemisphaerica

Overview
NameXLOC_040073
Unique NameXLOC_040073
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_404:435890..440426-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_040073 ID=XLOC_040073|Name=XLOC_040073|organism=Clytia hemisphaerica|type=gene|length=4537bp|location=Sequence derived from alignment at scaffold_404:435890..440426- (Clytia hemisphaerica)
ATGATTGCCTTACCTTCCTCCACCACCACACTTCAGTTGACGCCAAATAG AAACCATACTTTCGATGGAGTTAAGAAGTATCAGCGAGTTAGAAGAAAAG TGGATTACCCCTTTAAGTAAAGTTAAATTCTGACAAAAATGCCACAAATT CAAATGATAAGCGGTGTTTTTCGATTATTAGATCATTTAAAACCGGAATT CATGATAAGTTTTTGGTGCGTGCCATAAATCCGAACGACGTGTAATCTGA TCCGGAACAATATTCAATCCGTGTTTCTCAATCACCCAAATAAAAGTTGT CAAAATATTAAGATATCAAAAACACATCCAAGACAGGCATCAAGTGTTGG AATGAGGGATATGACAAGTTTGTACGTGAAGCAAAAATAGAAGGTCACTT GTTTTTGAGAAAACTTCTCATAACATATTACTACAAAAATTGGTAGCAGA AGGAATATCGACACAAAAATCAATCAATAAAAGTATGATATAATAATATG TCTATATGAAAAGTTTTTTTTTAATTCATCATCAAAAATCTTTGTATAGA AGGGAATCGCGATTATCGAGTGAGAACGGATAGTGTTCTACAAAGGAAAA ATGATAAATGAATAAAAAATAGACCTTGTTAGAAAAAATAAGATTTGCTG CTGGAAAACTTTCTATTAATAGGAAGGCACAGTTAGTTTATTCATAGCTA TTTGTTTGCAGTACAAGCCTCTTGTGGTGAGAGTGAGGTCTCATCCAAGT CAATTCAAGTTTGGGGCTCAAGAAGTCATGTGGTTTATATCTATGGTCAA CTATACAGCACGAATTCATGAAACATTTAAACTCAACTAAGTTGTTGACA AATGGCGAAGCAAGAAAATGTTGATAAAGGAAGGGTATATTCTTAAAAGC ACGCGTGAATTTATGACAAAAACAAGTATATTTTTCTACTTTAGTCAAGG GCATAATTAACGCATAATTCTGAAGTTTTCATACATTCTTCTCTTTTCAG GTAATCTCTCAGACGGACACGGCTACGGACCACATCGGTCGACGACTCTC CATAAATGAAATTGTACGGTCAGATAGCACTATGGGTTTACACTCTCTTG TCTCTTACATTATTGGCTAGTTGCTTGCCACACGACCCATCAAATGAAAA ATCACGTGGTCAACCATCCTTCATAATCGACTATCAAAATGATTGTTTCC TTAAAGATGGAAAGCCGTTCCGGTATATTTCCGGTGGATTACATTATTTC CGGATTCCTTCGTTCTATTGGAAAGATCGAATACAAAAAGCAAAAGCACT TGGTTTAAACACTATACAGACCTATATACCATGGAATTTCCACAATCCAG AACCAGGGGTATACAAATTCAATGGCGAACAAGATTTATTGAAGTTTATA GATGTGGTACAAGAAGAAGGCATGCTGTTGATTCTACGCCCAGGACCTTA TGTTGATGCTGANAATTCATCATCAAAAATCTTTGTATAGAAGGGAATCG CGATTATCGAGTGAGAACGGATAGTGTTTTACAAAGGAAAAATGATAAAT GAATAAAAAATAGACCTTGTTAGAAAAAATAAGATTTGCTGCTGGAAAAC TTTCTATTAATAGGAAGGCACAGTTAGTTTATTCATAGCTATTTGTTTGC AGTACAAGCCTCTTGTGGTGAGAGTTAGCTCTCATCAAAGTCAATTCAAG TTTGGGGCTCAAGAAGTCATGTGGTTTATTTCTATGGTCAACTATACAGC ACATATTCATGAAACATTTAAACTCAACTAAGTTGTTGACAAATGGCGAA GCAAGAACATGTTGATAAAGGAAGGGTATATTCTTAAAAGCACGCGTGAA TTTATGACAAAAACAAGTATATTTTTCTACTTTAGTCAAGGGCATAATTA ACGCATAATTCTGAAGTTTTCATACAATTTCTTCTCTTTTCAGGTAATCT CTCAAACGGACACGGCTACGGACCACATTGGTCGACGACTCTCCATAAAT GAAATTGTACGGTCAGATAGCACTATGGGTTTACACTCTCTTGTCTCTTA CATTATTGGCTAGTTGCTTGCCACACGACCCATCAAATGAAAAATCACGT GGTCAACCATCCTTCATAATCGACTATCAAAATGATTGTTTCCTTAAAGA TGGAAAGCCGTTCCGGTATATTTCCGGTGGATTACATTATTTCCGGATTC CTTCGTTCTATTGGAAAGATCGAATACAAAAAGCAAAAGCACTTGGTTTA AACACTATACAGACCTATATACCATGGAATTTCCACAATCCAGAACCAGG GGTATACAAATTTAATGGCGAACAAGATTTATTGAAGTTTATAGATGTGG TACAAGAAGAAGGCATGCTGTTGATTCTACGCCCAGGACCTTATGTTGAT GCTGAATGGGAGTATGGAGGTTTCCCATGGTTCCTTAAGAATGAACAAAC AATGGAAATGAGAACTTCAGATCCAACCTATATGCGTTATGTTCAGGGAT GGTTTGACATGCTTTTTCCAAGATTAGCAATGAAACTGTACAAAAATGGA GGACCGATTATAGCATTTCAAGTAGAGAACGAATATGGAAATTATTATGC ATGCGATAAAGAATATCTTTCACTTCTCAAGAGTATATATGTGAAATATT TTGGTGAAGATACAGTTCTATTTACAACAGATGGGTATACGGACAACTAT GTCTTGCGGAACAACTCCGGAAATCTTTGCAACTATTGATTTCGGAACTG AGATTACGCCGGAGGAAGCATTTGCACAACAGCGGAAATATCAAACGAAA GGACCCCTTGTGAATTCTGAATACTATACAGGCTGGTTAGACTATTGGGG AAGTCCTCATCAGCGACGTGGTGCTGACGTCATTGCAAAACACTTGAAAG ATATTTTAACAACAAATGCTTCCTTGAATCTATACATGCTTCACGGAGGA ACAAACTTCGGTTTCATGAATGGTGTAGATATAGGTTCTAAAGGGTCTCG ATTGATATCACCAACCAGCTATGACTATGATGCTCCTTTATCTGAAGCTG GTGACACGACCTGGAAGTATTTCAAAATGCGAGAAGTTTTGAAACAATTC AATGCAAATCCTTTACCTGCAGTCCCAGCAAACACTTCAAAACTGGTTCA AGGAGCTTTACGAGTACCACCACTGAAAACATTTGTTGATTTTAAAGGAT ACTTAGTCTATTGGGGTCTAAATGTTATTGAAAGTGATTCTCCAAAACCA ATGTCCGAGCTCGGTCTTGGTTATGGCTTCGTTTGTTATACACCACAAAT CCCTCCAAAATATCAGAATAAAACAGTAACATTGGTTTTCAAAGAAATGT CAGATGAAGCTATATTCGTCGTTGATAATGTTTATAAATTTAGTATTGGA GAAGCGGTCAAGAACTACGAGTTGAAGATAGAACTAGGTGTTGAGTTGGA TATTTTGGTAGTTAACCAAGGTCGAGCAGCTTATGCACCCAAAGGATATC ATTATCTTCAAGAATGTAAAGGAATATGTGGAGATGTGAGATTCAAAGAT TCCAATGAAACGTTGAAAGGATGGAAGCAGTATAATATTAATGATACAAC CATTTGGGAAGAGAATCACCCAAACTTTCCTGCTGAGAATCATATCGGAA AGACCACCAAAGGATCAGACCTGATGGATAGATTCTTTGAAGATAGTGAA AATCGCAAAGAAGATCAATTCAAAATCCAACCAATATTACCGATCGAAAA CAACCTGGATAGATATCCTAGTCAGATAAAATCAACACAAAAAGAATACC AATTTGTTTGGGAATCGTTTTTCGCCCTACAAAACACCACTGATACATAT TTACGAATGAAAGGTTTCAATAAGGGTCAAGTCTATCTCAACATGTATAA CTTGGGTCGATTTTGGCAAGAAAAAGGGCCACAAAAGACTTTGTTCGTAC CAAAGAATTATCTGCAAGCCGGTTTAAATGTTCTTTTGGTAATAGCTTTG GATGATTATCCAACACTCCAACTTAATCCGCCTCAGTATCCAGAATTTGA ATTTGTGGTTCAACCTGACTTAGGATAAATTTAGTTTTTCTAAATTCTCT ATATAGTAGATATTTAGGATTTTTAGCCAAAATCTAGATTATTTTTAACT GAATTGTATGTTGGCAATATAGAGAGGTGTACTGGTTTCCTGAATTGCGA TTTCTGGAAACGAAAAGAAGATTCAAAAAACGATACTGATAGGTTTAAAA CTTCTTGCTTTTAAGGTTAGGGCCCCGGTTGATATGTCTCCCTAATGGGA ATGGTAATGAGGAGCTGAAAGCTCTTTCCCCGCGTAAGCTTTTTCAATAG AGGACGTGTGGCTCCACTGGCTGGAGAAGCAGAAATACTCTTTAGAATAT TACGGAACTCGAACCTCTATAACTTAAAATGTCGACTTAAGCCGAACATT CAGTCAGCAATGCCTTATAAACCTTACTCCACAACTCGAAATTTCCTTAA ACTCGTGCTCCCCGTTCGTGTTCGAGTTATGGAGACT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00063936TCONS_00063936Clytia hemisphaericatranscript
TCONS_00063935TCONS_00063935Clytia hemisphaericatranscript
TCONS_00063934TCONS_00063934Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00063934-proteinTCONS_00063934-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_404supercontigscaffold_404:435890..440426 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0 0.01 0.02 0 0.86 1.05 3.6 3.25 1.92 3.32 2.59 1.79 4.1 4.83 10.81 11.65 8.96 11.03 6.77 7.67 7.85 8.17 5.43 7.77 5.19 5.36 8.64 5.58 13.81 11.5