XLOC_040479 (gene) - C. hemisphaerica

Overview
NameXLOC_040479
Unique NameXLOC_040479
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_419:32085..36698+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_040479 ID=XLOC_040479|Name=XLOC_040479|organism=Clytia hemisphaerica|type=gene|length=4614bp|location=Sequence derived from alignment at scaffold_419:32085..36698+ (Clytia hemisphaerica)
GCATGTAGCATTGTTGGTGATCTAAAGAATGGTCGTGTTGTTCAAATTGA GAATGCTAAGATTGACAAATATCTAACAGGCGAATTCGGTAGACTGTAAG TATAAAggaattttggcggggatttcaTTTCGCGGATGGCAGAAAAAAGA CTTTTCAGAGGAAATTTGGATATTGCGTAAATCCTATCAAATAGGCAAAG CTTGAATTTTTGATGAATTCGTCAAAATTTTCAACTGTCTAGATATTTTC GTACCAAAGTAAATGTAGGCGAAACAAACTTAATACGTTGCGCCCTATAG TATCTTTTTTCATGGTGACGATAGATTCTAAAAATCGATTATCCAATGTT AAAAGATCGTGTTTAAGGCAAGAAAATTAAAGTTGTTCTGACCTGTGACC ATTGAATTCCCAATTAAGTCTCATTATCTTTTTTCATGGTGACGATAGAT TCTAAAAATCGATTATCCAATGTTAAAAGATCGTGTTTAAGGCAAGAAAA TTAAAGTTGTTCTAACCTGTGACCATTGAATTCCCAATTAAGTCCCAAAG GGGCTAGCAGTATAATGATGTCATATGcatagaaaaaaatacaaactagc GACCAACTATGACAATCTGTAATTCAAAAAAGGTCAATGTacactgagaa aaaaaaaacaggactaAAAAATAACAGTAGTACAGAGAATAAAGGATAAA AGGAATGCATAAGACACAAAAGGAAGTGATAAACTGAAGACCGAAGTCTG AGTTCAGGTGCGGTATAAGCATCCTCTGCCACTTTAGAGTCAAGAAATCT TACTCAAGcaacgaaaaaaaaagaaactttaaaattAGCTCTGGATTTAG AATGACGTAATAGATATTAGATCAGATATTAGATTAGATATTAGTTTTCA AGCGAAAGatattatttatatatttattcaatataaagttatgatacaaa gttaataagtgNNtatagactggatggcgcgattaagtggcccggtagta tatggtaatatgcttttgcttaggcggactgtaaaacagtccgccagatt ttagttgtttgtTGTTNCGACTTCTTGTTTGTTTATGGGGTTTATCTCTG TATGAACGTGTATTATATGAAACGGGGCTACttcagtaaaaataaaatct ttaattgTTAATTTGTGGATTAAGTTTTCAAACGCAGGTAATTCTATGCA CATTTTCGAAAAGTTAGGCCATNccaagtagttttattgttatttggatt tttaatattttttttcaaaatggcgactttgccaaatgctcctagtctac ttcactggactcagcgtcataagaaattatcaaaaagcaaagttcagcta aaagtagactctagtctaataaGTGATTGACGTCTGAAAACGCTGCGTGT ACGTCATTTaagggccaaaatgacgtcatcaacacaCGATTCACAGTATT TTAAGTTTTGATCCGTTTTAAGTtataaattttagatttttggaatttgt cTGGGATTTGGGATATTTGGAATAAAATTACGAGATTCTTTTGAGCAGCG GAAAGATAGCCTCGGCCCCTTAACATAACTGGTGTGCTTGGGGCGTCTAT AAagaatccctttcgctttgcaaacacgagactcgttctccgtgcgtaac tTCTTTTACCATTGATCTGgcatttgtgtgaaaaccacacgGGTCACGTG TATTGGATAAGAAATAAGTGGATTCATTTCCCATCTCAGGGTTTCAAATC TAGCCCCTTTTCAGCTTTGAAATAAATGGCTGTGACGCcacattttattg attttgttatAACAATGAAAAGTGATTTCGAACAAATTGATTACTTGATT TTTTGCCCAGCTTTTTTTAGCATATCGATCAGTGTTTATGTCCGTTTTTT GAAGAAGCAGCGCTTTGTCAAGTTATTCATTTCGACTTGTTACACAATCA ATTCAAATTATCATTGcgaaaaaaacatttgactATTGCTATATCGCCGT CATCTTCATGCAGCTTCGACTTCTTGTTTGTTTATGGGGTTTATCTCTGT ATGAACGTGTATTATATGAAACGGGGCTACttcagtaaaaataaaatctt taattgTTAATTTGTGGATTAAGTTTTCAAACGCAGGTAATTCTATGCAC ATTTTCGAAAAGTTAGGCCATCTGAAAAGATGTCCTGAAAGCTCTCGAGC AATAGTCCAGCAGTCGAATTgcattcacttttttcaaaaaaattgagata taaatcagtgaatttgctgacagtcaaattatACAATCTGTCTTCTGTCT TAGTACTTAGAAATtcagattgattcatttttcgatcCAAACAGTACAGT agaacaatgattgaatatggacaaaagtgattgttgttggtggttgaatt ggcaacaaaattccactgtaactaaattaattcaacaatcgtcattcaac atactctactcccaacaagaatgcttaaagatcctgtgttattatggtac ttcgacagtgagtacaaatatttttttctttgtgtacttttataagactt ggttttattaatcttttatgttttaacctgtgttcttgttgatacttagg cggtcatcgaaaaaatgctctgttcgcgtggcaactggtgttaaaaatgc atgcgggcggacgggcaGTCAAAACAATTCCcaggtttttttaaatcacg tCAGTAATTCAGGGGCGGGTGGTGTcacgagcaaaacaatttttcaatga ccatcggagcaattgagaaaaaagctatactttgaaagaacaaattggtt ttcccggatttttttccgcatctctgcaaatcagcagaaaatatcaagtc ctgaatgtacgctatttcctgttaatacctgcttcctgctcatcaatatt gcctcgttactgatactattaccaTGTTACGTTctatcatcttccatcct ttacacgACGCTGTTANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNTTTCCAAAAAAAGTGGACGGAccattttataatattttttg ttttcggcgatccaaaaaatatctgtaATCTGATcagttaaaaagagtac aatttATCTTATATTTTAAATGAAGCAATCTAatgtcactttgctacaaa agtgccctgcgcttttttccaacacaaaaagtgcatttttttggTCATCG ATTAACACATAAACCAATTATCAGATATTtcctcgtacaatatggaaata tatcctcgttccggattttccgtatatatATTGTATGGACAacctcggaa ctcgtaaaatatttctcatattgtactcgcaactgtccgataactattac ttatcgTAAATTTAACTTATTTTATACTTCATATAACTTttatctttttg taattttgaataGTATAaagcgagaccaatttaatttgttgttctacggg cctgaccgaccctatttttgctaaaatcaaaaaaataataatagcgaatt tccactaaaatatattttacacactagttatttgtaagaattaaacttga ataaagctgaaaattaattcaagaaattgaaaattcataaaaagcattcc atacactaaaattttattatgatcttcattgaagataaaaaaatagtgaa tttttgatccagatactttttggaaaattttctcggtaccttaccaaccc tgataaatgaaaaatttattcttattttgccgaccgaccgaccgacccat atttttctaacaatctgtccgtagaacaacaaattaaattgctCTCGCCT AACATAAACATTGCTTGcttttgagagaaaaataaatgacTGAGACTAAT ACCACGTTTGAAAGATAATTATGAGCGACTTGATATAAGCTATGAATtgt ctaaaatttgaaaatttctctccttggtaaaaaactgatttaTATATGTA TTcagatattttatattttttatgaccatttttaacaatttaCCACCCGT GAATTTTTTCGAAGGATTGTAACTTTTGATTAAAGGAATACCTTTCCCCC CCTCAAGAGGAATGTTTAAAAAACGAACTgctattttttttgaaacagaa ttcatattgatactTTCTCTACAGTAATAGGGAAATGAAATAACCATGGA GAtaaatatagatggagataccNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNTATAATCATGTGCCTTTTGATTCAGTCTTTCCCATTC GAATCAAATTCATTTTCctccaaataaataaattctaaatCATTAAATTG TCTTCAGGGAACAGTTTGCTCCAGCTGCATATCGATGGTGGATGAACATA AAATATAATGAAACTGCCATGAAATACAAATTTCTTTCCGAAGGAACTTA TTCACCTTATCGTA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00064536TCONS_00064536Clytia hemisphaericatranscript
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_419supercontigscaffold_419:32085..36698 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.69 0 0 0 0 0 0