XLOC_040495 (gene) - C. hemisphaerica

Overview
NameXLOC_040495
Unique NameXLOC_040495
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_419:325976..331568-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_040495 ID=XLOC_040495|Name=XLOC_040495|organism=Clytia hemisphaerica|type=gene|length=5593bp|location=Sequence derived from alignment at scaffold_419:325976..331568- (Clytia hemisphaerica)
CACCATGCTGACAGGAACTTTATCTCGACCAAACAGTGACAGCCTATCTT CATCCACTCTTGACGAAGGTGTTCACCTCAACCAGGAATACATGTTCAAT CATGAAGGTGTTCTGCATAGTATCGAGATCTTCGTCGAACGACCTGGTAT CGTCAAATTCTGGGTAAGAGCCTAGCTGACACACAAACTTACTTTCAACA TTCACATATTGTTATATGAACGTTGTGAACATAACATAAACGTTAAAACA ACATTGTGAGCCAGCTGGAAGTACCACGCTAGGTTAGTGCAAGAGTTGTA TGGGACTGAGCCATTTTTTATTCGATATTGATACGACATCAATATCAATT TAGATTTTCCATTTTTCCTTATGGGGGATAAGAAGTAAGCGACGTTTATT AATGGGATTCGATTTTAGGGTGTTTTTCTCACTTGAAATATTTTATGGCC TAATCTTCCAGGTAGGAAGTTAGGACTAAATATATGATTTTACAATTGCT TCTAGATTGTTGAGCCAGCTTATGAAGATACATTGTGTGTACGTGATATT GATTTGACCAAACCATTCAATGCAAATGATGCTCAAAATGATTTCACCGA ATGGAGAATCGATCATTTCAACGTCAAATATAGTGAGTATCTCTTATTCT ATTTTTTCAAGGAATTGGATTTTCATCGAATAAAAGTGGGCGTATCAAAT GGTAGAGCGTCTTTTATGAGAGTTTTTTGTTGACGTTGAATTAGGGAATG TCTTGAAAAACTTGTTTACACGCGTCATTTTGATAGAACAGTTTGCCTTT TTTCCTCTTTTCAATCTTTCCCAGCTGGCACACAACGCGTTTTTTCGACA TTTAACTAACGTTCACAACGTCCATATAACGTTAGGTGAACGTTGAAACA ACGTTGTGTGCCAGCTAGTTTTCTTTTCTTTATTAATCAAATTTACAGCA ATTATGACAAAGCTACCAGCAGGACGTCAGCAAATTCTGGTAGCAAAAGA TATTCATGTAAAGCGAGGATATTTTCTCGCGTTCGTTAACTCTGGAACTC AGTCATCCAGTCAAATCTATCTCAAAAAGACCAAAACTCAAACTCTACAC TGGAGCGCTAAAAACTTCAAATCTGATCTTACAAACCGTCAAGAAATCGG GTTGTTTCCGAGTATCCAAACGGTTTCAATCCAGCCAATTTCTTTACCGA TCGGGATACGACTTACAAGTTATGAGAACATCATTATTGACGTGACAGCA AAAAGTACAAAGAGTGGCGTGGAGAAAAAGAAAGTTTTGCTGATTGAGGG GGATGATGAAATTCAGGTAAGCTTATTACTATGACATTACGTCACTTTCA CAAAAGCTGTTTGCTTTTATAACTTTTTTAACTTTAACCCTACCTACTGA GAGGGGGGGGGGCACTTTGTGCCCCCCCTGTTAGAAAATTGGCTGGCATT TTTTAACTATTGAGGCTATGAAGCTGAAATTTTATGACTTTTCATCAAAT TTTATAGGGAATGTTTTAATAAAAAATTTATTTTCATTGGTCAATTATTT TAGTCCCAATGACAGGTTTGTCGGTGACCAGTACCATCCCACAACTGCAC CGCAGGCTATTTTGCTCTTTTTTATGTGCTTACTCCAAGATACTATAACA TGTTGCCAGGTATACTTTAATGGTCCATTTCATTTGTATTGCTTCTATTA CATCTTAAAGGAGAATTAGCAGCAACAAATAAATATAAATATGACAAAAA AAGTATCACCGACTTGAAAAAGTTGAAATGCTCTGATTTTACGTGGTTTT GAAATTTTATAACATTTTTTCGGTTTTGGCGCGCTATAGTAGAACGTCAT GACAAAATTGTTGATTGAAATTTTAATTTCCATTTAGTACATTGTAAAAG CTTTCAAATAAAAGCAAAATGAAGGAGAATGTGTTTCTCCATCGGTTTCA ATAGCAATTTTAAGAAACATCATTTTTTTGAGTTTTTTGGGTGATTTTTG CCAATTGTTGATACAATTGATGACGTCATCAAAAATTGAATTCAATTTTC AAAAGTATTGTTTGATAGATTTGTTTGTTATAGGTTTAAGCATTGCTGTA CCAAATTTCATGACCAAATAATGTTCCTATCCTAAGTTATCCATGGGGGG CACTATGTGCCCCCCCTTTCAGTTCTAAGGGACCCAAATAGCTCTCAGTA GGTAGGGTTAACAGAATTTTAGTGTAAAAAAGAAAATTTATTAAGGCCAT TAGATTTGAAGATTTTACCCAGGGCAATTGGCGCATTTTGCAGGTCAAAA ACCTCAAGCCCTCTAAGCAATTATCGCTTAAAGCATCACATTTTTCGTAC AAATTTAGGAAAAAATTGAAGGATTGAAGTTTGTTCATGGCTTTAAGAAA ATTTATAGTACTGAGGAGAGAAATTTTACCATCAAAGTCAGCATTACCAA AGGCACTAATGTTGTGTATATGTTCGATGTACCCGCATTGAGAAAGTCAA GGGAATCAACCAATGGGGAAGAATTATTTGACATTACCTTACTGGATGTG GGTGAGTTAAAAATCCATTATGAACATATAAAATTTTTGTTTGTCCTTTA ATAATTTTGTCCTTTAATTTTTTTCAACTACTAAATCAGTAATTAAAAAT TACGTAGTTGAATGGAAAATGAAAATAATTTTCGCTGGCTTACTTTGGTT AGGTAAGTGTTCTTTCTAAATTTTCTTCATCTTTAGGAAAATATGACATT TGGGTGACAGCAGCAAACAAGGTCAGCTTTCAGAAGATAAAGACTACCTT TGAAATAGTGGATAAGATAGATAAACATCAAATCAAGTTCGAAAGGAAAG ACGTATACAAGAGTGAAGAATTCACGGTAAGGTTTTTTGTTTACCTTCTA ACCCGGACATATACAGTTGACGATCTCTTTTATTTTCGACGTTCTATTAT TCGATAGTCCCTTATTCGATGGAAACTCGATTCCTCTTGAAAATCGAATT AGAGAGCATCAACTGTACTAAAATTTACCATTCAATTATTTAACTCAAAA ATCTTTCTGAAACTGAATCCATAACTGAATTTAGATATTTGCAAAATGTT TACCTTTTTTGACAATAAATTTTGCTTTTGCTGTAGCTTGACGGTTTGAA ATATTGTCCTGCTGCACACAAACCCATATTGTTAAGTCGGTGGTTTAAAG TATCAGATAGATTTGGAGAGCTATGTCTTTCCAGGACACTTAATCTAATT GCTCGTTTTTAATAAAAAACTATCTAAGAACATAACGCCTTCAGTGGTCT GTATCAAGAACAATTTAAGAATATTTCACGGTTTTATGAACTCTAAAACA CCCAATCTCTTAAGCAATTCCACAAAAATATTCACAAAATGGCGAAATAA CGTTCTTGTACTTAAAACTGAAAAAGTTAAGAGCATCCAAAGGTTTTAGA TGCTCTTATAAATCTTTCTTATAAATAAAACATGTATTCTATTTTTCCGG CCCACAGCTTGATGTCAACGTACAAAATGGCACCGACGTTTTATTAGAAG TCACATTCGGTGACGGTGAAAGAAACGTCCAACATATCAAAGACGCGCGA TCCAAAAATGGTGTCTTGCATAAAGTTACACATTCGTAAGTATTTTTTAA TTTCAGGTCAAATTCAAGATCTTCGGATTCTTTATTGAAAGAGTTGATGT TATTCCAACCAGGTAGATAACTGCAGTTTGCGAATAAAGTGTGTATTCAG TATGGCTTTGTTTAATTTAACCCTTCGTACAGCTTCCTATTTTTTTACTA GCATGGGAGGGATGGTGAACCGAGATGTGTAAAATTTTGGTAAAAATTTG GTAAAACCTGTCTGGTTGTAGTTTACAGACCAGAATGTAAACTTGATAAA AATCATTTATTGACTGATTGGCTGATTTGTCAAATTAAGAAACGTAACAG AAATAAATAGTTCTTAAAGTATTTGGTACTTTTCAGAGTGGTCTGTAAAA TACACGTGACCACCTGCCGGAAATTAGGAATTACTGAAGCTTCTGACTTG AAACTTTCGTCAGTCATCAATACCTAACACCTGTCAAGATAGCTCATAGC ATTTTCCTATCTAGGATTTAACCTAAGAAGGCTAATTTAAACACAACTGG AAAAAAGGCAAGTTGAAAAAATTTGACCCTGCGCTTTAAAGATATATGTC GGGTGGATTTGCCGTACAAATTTTGAGCTGACAAATATAAGTGAGGAGGT CCTTTTGTCGGCATTTTCAAAAAATGATGACGTCAGTAAGTGAAATTACG TCATCAATGACGGCGAAATTTTCACATATTTTAATTAGGACCATTCTTGT CATTCGGGTGATTTTGGGCATTTTACCCGGCATCTTGAAAAGCCGGAGGA AAATGATAGTAGCTATCAAATGAATACACATATCAACTTTTGAAGCGTAA GGAGGCTGGGTTCTAGTTTACCAGGCAAGAATGACGAAGAAATGTCGGAA GTCATTACATCGTGTTATTTACTTGTATATTCATTATCTCATTAACTGAC AATTTTCATTCCAGGTATAGCCATTGCGGACGTTTCACCATCACATCGAA AGTGCGTAACCTTCTAACACAAGGTGAATGGGAGGAAACATACAGTACAA TAGCTGTTGACGTCATTTGTCGTGTCGACAAAAAGGCGGTCATTATCGAG CCGTTTCCAATCCGCCTTGAGAACGAAAAGCATTTTGAGGTCGCTCTCGA ACGCCCCTTTCTTGTCAATATTCATGCAAGGATTGGTTCTTATTTGACGT TTTTTATCCATTGGGGAGATGGTAGTGAAAGTATTGTGGATCAATCTGTA AGGTAAGGTGGTCGAAAGTTTTTTTACAGTCACACTGTGTTGAGGTTTGG TAATCGCGATCATGGTTTTTGAGGGAAAAGGTTGATCCTAGGGATCTACA TATCAGTAAAAATCCAAAAACTGATTTCTAGCTAAAAACCTTTTAGAAGC CTATTTTACAAAAATACAAGCAAAGATATTCATTCAAATTCACTATTACT TTTTCAAATTTGGTTTTCTTTCTTATTTCTGTTTAAAGAATCATATCGAA GCGATTCAAAACGAAAAAGCGTTACACGTCAGTCGGTCTTTATAACGTCA CGTTAACGATCCGTGACCTCAAAGGAGCCGTCAAACTGTCTATTGGTACC GTTAACGTGACGCAATGCGGTGCCCCGTTGCTCATCTTCAATTACGGGTT GAAAGAAGATCCAGAGTTGTTTCCCGTATCAAACGATAAAATCATGACCG GAGTATGGTTTGTTGGTGACAATTGTACGCAACGTGTTAACCCGTATTTT TCAGTTAAACGCTGGTCTGTAAAATACAGGAATGGAACATTTATAAAAGA TCTAGTACCTGCAGTTAAGAGAAATGATAAGACAACGAAAGTATTGATCA AGAAAGGCTCCTTGGATATAGGTAAGATATATTTTTAGTTATTTTCTCTT TGCTATGTTCGTTATTCTATACGCAATAATGCGCTAAATATTTAGTCGAG GAACAAATTTTTCATGGTAAAGGTACATTTTAATCAATTTTCT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00064571TCONS_00064571Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00064571-proteinTCONS_00064571-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_419supercontigscaffold_419:325976..331568 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.56 0.57 0.21 0.14 4.8 3.37 3.64 4.89 1.86 2.74 3.02 2.75 4.32 3.84 1.25 1.98 2.67 2.85 5.85 8.62 2.54 2.86 0.81 1.82 8.59 7.01 2 2.1 1.11 1.44