XLOC_040679 (gene) - C. hemisphaerica

Overview
NameXLOC_040679
Unique NameXLOC_040679
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_425:346412..350983+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_040679 ID=XLOC_040679|Name=XLOC_040679|organism=Clytia hemisphaerica|type=gene|length=4572bp|location=Sequence derived from alignment at scaffold_425:346412..350983+ (Clytia hemisphaerica)
ACCTGTTCTTCAAAGGTTGATTTGTATTCTTCAAGCTTGGATACCAGCTG CTCTTGTTCCTGGTCAAATTCAGCAAGTTTTTTTCTGTAATATTCAAGAA GTTCCTTTGATGGTCTTAGCTGGCCGAGTCTTTCAATGACACTTGGAATT GGGCTGTCAGATCTAGAAGAATTTACACTAGAAATTTCTGTAAATTCGgc cgccatatttgtttttgaaaattatccGCCAACAATATTACGGCTGCCGA CTTTTATAAACATTCGAAGGATTCGTATCAAAATGGCGGCCAGTTTCGTG ATCACATTTGCAATTTTTATTGCAATAGCTTCCAAAATCTTCTTAGAATT CAGTCAAACTATATCAAGACCTTACAtggatgaaatttttcacataCCGC AAGCTCAAAATTATTGTCatggaaattatttttattggGACAACAAAATA ACAACACTTCCAGGGCTGTATATATTCAGTCAAatttatttgaaagtttt tgcaaCTCTTCAAGGATTACAAATCAAAGATTTATGCGATGTGAAAGATC TGAGACTGACAAATGTCATATTTATTGCTTTGACCTTTCTCTATTTGTAT CAAACTTTCAGAACATATAACCATGGAAAGAGATTTCaggtaatattttt aaatatataccgtggtgaaaaagggtaacttgcatcagtggaggctaaca tgcatagccctcaaatgaaaggcctggctggtcattaaaatacgaaaata aatcgaaacaaaaatggtagagtagagctgcgagcggagctgcgtatgtg tattttaatgaccagccaggtcattcatttgagggctatgcatgttagcc tccactgatgcaagttaccctttctcacggtatattttttaattttgttg tactcaacttttcatcattttgttttACACTGTACTTCTTCGTAGTCTTT TTGTGTCCTTTTACCCTTCCCTGGTGAAAGTTAAGGCAAGGCACAAAGAA TATTTATCCAAGGCAAGGAAATCCAAAATGATTTGATAGGATCTGGTAAA TTTTGAAGTTGCAAGAAATTAGTTACTAACTTATTTAGCCTTTTAGGTTT TCTACATTTTGGATCAATTTCTGTAATTAATGCGGCTATGATTCGATGTT TTAGGAACCTAAATTGATTGAGAGTTCCTTATTGCTTGAATAGCGTATAT CTTCTTTATCACTAAAATTTAACTCTAAAATACCCTAGAAATATTCCCTA CTTATATACTACTTCAAAAACTGCTGATATAATGAAAATCCTaaacaaag caaaataaaagacctattgttcaaatataatgAAGATTTAGTACGTGTTC TACGTCANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNAATGTTTCTTCGTTTCTTCTCTTTTCGAGAATGTTCTTTAAATG TTCAAATCGCGTTCGCGACAATTTCTATCAGACATTATTAGAATATCTTA GGGCTTCAGAGATCTATTTTAGGGCTTGTGAAAAAGTCGCGAAAGAAAGA AGGAAAAAGGGTCGATAGTATTGTGAAAGATAAATTGAAAAGATTGCGAA AGAAAGAGCTGAAAAGATCGCAAAAGGCTAGAAAATATCgccaaaaaaag aattgaaaagatCCCGAAAGAAAAAGTAGTCGAAATAATTTTGGAGGGAA ATGCTGAAGAAATTTCGAACGAAAGAGTCGAAAAGATCTCGAACGAAAGA GTCGAAAAGTTCTCGAACGAAAGAGTCGAAAAGATCTCGAACGAAAAAGT CGAAAAGATCCCGAACGAATGAGTCGAAAAGATCTCGAGCGAAAGAGTCA AAAAGATCTCGAACGAAAGACTCGAAAAGATCTCGAACGAAAGACTCGAA AAGGTCTCTAACGAAAGAGTTAAAAAGATCGCAATAAAGAATAAGGGAAA AGGAAgagtagaaaaaatgaaaaagaaagcagctgaaaagaaaaacagat aAGACCGCGATAGAGAGAGTTGAAATCCTCGTAAAAGAAAGAATCGAAAA TATTTCGCCAGAAACCTTAACCATGTTTGACATATGGTATAATTTTTAAG CGGATTTACGGTAATTTTAGAAGAACCGAATCCCGTTTAGATCCTGATAA AGTACACCCCTATCGAACACTCCATAATTTTCCAATGATTCGTTTTTCAG GACTCGATGAAAGTTGCTTGTGCCGCTTTGGTGGTGGTTCACTTCCCGCT TCTGTATTTCTTCACCTTTCTCTATTACACTGATGTCGGCTCCACCTTGT TTGTACTCATGGCGTATTATTGGAGCATGAAGAACCGCCACTGGTTATCC GCCTCTTTTGGCGTCATCGCAATCTTCTTTCGCCAAACGAATATCGTATG GGTTGGATTCTGTTGTATTTGTGCACTCCTAAACCATTTAAGACGAAATG GAAAGTTGGGCAAAGACGACTCTCTGGTCCGTCAAATATTCGATGCCGTT TTAGGATGTTTATCAATGCTTTTATCTTCGATTTGGATTGCAGTTCCGTA TGTTTTTGTGCTGGTTGGTTTTGTAGGATTTGTTATCAAAAACGACGGAA TCGTGGTCGGCGATCGTACGTCGCATGAAGCTTGCCTCAATTTTCcacaa attttatatttttctgttttcacCATATGTTTTTCATCATTCGTTGCATT GAGATATTTGAATATCcttaaaaccttgaaaatggtTTGGAACTTCATTA CATCACCTATAAACTTGTTATGCTTAATCGTTCTCAGTGCTGGTATGTTT TATGCCGTTCACCATTATACTTATCAGCATTTATACCTGATCTCCGATAA CCGTCACTTTACTTTCTACATTTGGAAGAAAATATTCGGATATCACCACG ATGTCAAGTATTACCTAATTCCTATTTACGCAGTATCCACCTTGGTCATG ATCAACGAGCTTTCCTACAGGCGATCAAGCCTCTGGATCCTTGTCTTCTT CGCATGCACAGCTATTGTCTTAGTTCCACAGAAGTTATTAGAGTTCCGTT ATTTTATCATCCCATATTTGATTTTCCGCTTAAATTTGCGACCATCGACC TGGTTAGAATTGTTGGTAGAAGGGTTGGTTTATGGTGTAGTGAACTATTT GACGATGAACATCTTCTTGACTCGGACACACACTCAAGATGGACATACTG GACAAAGAATCATGTGGTAAATTTCATTAGTATTTTTAGGTATCCCTATT TAGTATCTCGGTTGAAGATGTT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00064855TCONS_00064855Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00064855-proteinTCONS_00064855-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_425supercontigscaffold_425:346412..350983 +
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
ALG10dol-P-Glc:Glc(2)Man(9)GlcNAc(2)-PP-Dol alpha-1,2-glucosyltransferase Homo Sapiens
ALG10Bputative Dol-P-Glc:Glc(2)Man(9)GlcNAc(2)-PP-Dol alpha-1,2-glucosyltransferase Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
10.2 9.54 2.84 2.58 3.58 2.82 9.39 11.44 3.94 3.67 3.49 2.64 2.75 2.23 3.3 3.59 5.7 4.04 1.93 1.47 2.92 2.37 9.69 9.16 4.16 4.19 1.62 0.96 6.07 6.03