XLOC_040887 (gene) - C. hemisphaerica

Overview
NameXLOC_040887
Unique NameXLOC_040887
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_433:452172..461908-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_040887 ID=XLOC_040887|Name=XLOC_040887|organism=Clytia hemisphaerica|type=gene|length=9737bp|location=Sequence derived from alignment at scaffold_433:452172..461908- (Clytia hemisphaerica)
TAGACACCTGCTACTGCATTCTACAACGCCAGTTTTTTACCATTTTTTCA GATACTGAAATTCTCCTGTCTTTTTTACTCAGGAATAACAAAGATACTTT TAACATTAAAAAATATATCAATTAAATAAAAATTACTAATGAATCGCTTG ATCATCCGCCATGCACGGCAAATTGTTCAAATATGTACCAACAGAGAACC CATGATATGCGATCCAAAACTCTTACAAAACGTGTCTGTGTTGGAGTGCA ATGACGTCATCAAAGGATACTCCATCGTGGTAGATAGCAATGGAAATATA GCTGACGTAGGGAGTGATGATGTCATCGGAGAGAAATATAAAGATCATAC ATTTGAGAAAGATATCGATGCGACTGGAAAGTGTGTTTTGCCAGGTACAA ATTTTTGTTGATAGTTTTTGGCCTCAAACATTTTCTCTTTTCGATACTTA TGGGAAAACTTTTCCCACTTTAACACTTGACTTGCTTAAAATTCTGTCAT CTCAGGCTCAATATTGTTTTTAAATTATTTTTATTTTTTGTTGTTTTTAA ATCTCTCCCAAAACGATTTAATTTCGAGTATTATGGAAGAAATAGATTCA TCGGGGATTTGATTTGGCGGATGATAAAGCCAAAAATACTTTTTGAAATG AACTAAAATTTTGTTCCAAGGCCTGAAATAGAATGGATTTGAGAGGAATA AATGAAAAGCGAAATACTCTTTATTTTGTAAGGGTTTCCTTGAAATTGGA AGATTGTCAAAATAAGTTAACTGGGGTGGTTCTGAGAGCCCAGACTTTGA CGGTTCAGACTCCATAATACACAAAAATCTCATAGTTTGAACACTCTTCA GTATTAGAAAGCGAAGCCTCGGCAATCATTATATCGAAGAAATTAGAAAT TAGAAATTAGTTTTTAGTGTTCATATTGTTTGTTATTGATTACATATTAT TCAGGCTTTATTGATGGTCACACACACCCTGTTTGGACTGGTGACAGAGT TCACGAATTTGCTATGAAGGTAAAATTACTGAAGTTTGACCGAATCTGCC ATTATTTTTCCTTGATGAAGTCGCGTAAAAATCACGAAAATTTCAACATA AGCAGTCGTTTTGTTTTCTGTCTTATCAATTTTCTGCTTCCACCTTTTTA AGTTTCTTTCATTTATAAGAATTTCGTCTGTGCATTATGCTGTCCCTCAG TTAAAAAATTTTCATAGCATAACTTGAGCAAATTACAAAAAATGCATGTA GGATAAGATATGCAACTTACTCCAAACATAATTTGAGGCTCTTACAACAG GCCCCAAAAAGTATTTTGCTAAGCACAGCGAGACTCATAAAAATTTACCC TACTATGCTTATAAAAAATGTATGAATGAAATTGTTCAGTTATTTTTCTA CAGTTATCAGGTGCAACGTATATGGATATCCATAAAACAGGAGGAGGGAT TGGTTTTACTGTACAGAATGTCCATCAAAGTTCCGAAGAAGAACTTTATC AAAGCTTCGTACAGGTATAATATAAAGCTTATACGTTTTTCTTCATAAAT ACAAAGTATATAGGAACATAAGTATTCGATGACCGAAATATTAAAAACAA GTTTTTAAAGGATTTGCAGGTTAATGGCTTTGCGGGCTTTAAAAGACCCA ATACAGGAGAAATTGCACAAAATTATACACAGAACGATGAACGTAATAAC GTTTTAAGAACATTCTCTGACTTCAAAATTAAAAAGAATATCGGAAGGCT TCACGAGAATGAAGAGGCAAGCCTTATCCCAAACTACAAACATTTTTCAC CCAAAGATACTTTGAACTCTCCTGATTTCAACAAAGGTCTAAGCCTCTAG AGGGAGGCGAAAAACCCCGTATTTTGCTATTTTTTCACTCCAGCAGACAA CCCTCTAAGGCCTTATTTTTTGGACCTACTCCGGTGGGGTGGAGGTCCTA TAAATTAACCTGTGTTCGTTCGTTCGTCCGTTCGTCTGTTACCAACTTTT CTCAGGATTGAATTATAGGAATCTTTTGATTTTTGGTACAAAGGTGCAAA ATGGTGGTGACCAAATTGTAGGTCCATAAAAGTATCACTTGTTACTTCCT AAAAGCTATTTTGAGCAATTCATCTTTTGAAAGCTGAAAATATTTTCAAT AATAATCAATAAATGGGGGCGTCTGAAAGTTTTTCAAAAGTAATATAACC TGGGGAGACGTTTATTAGGTTGTTGTCACATTATTTCTATCAAAGAAAAT CGATTCTTTCGCTATTTCTTTACAGCGTTTAAACTGCATGATAAAATGCG GAACGACCACTGTAGAAGCTAAAAGTGGTTATGGTCTCGATGCTCCAAAC GAAATTAAGATGCTTCGTGTGATTCATCGAGCAAAAAAGGAGCTCAAAGA AACTATTGATATCTCATGCACTTATTGTGGAGCCCACTCTATTCCAAAGT AAGTTTTGATCTAGCGTGTTAGACTATTTATTGACAAGTTTTTCTTTTGA TTTTTTTTGCTACTTTTACAAGATACGCTTACCTAGACTATTTTTTGAGA AGTTTTTCTTTTTAATTTTGTTCTGTTTTTGCTGTGCTCACCTTTTTTTA GTTCTGGTCCCGAAAGTGTTATCGTTCCTTAAAAACCACGACCAACTTTT GGGGGTTGTTGGTGAACTAGGCTACACGCGTCTCCTCTGATATGTTTTCA TATAGGGGATGCATATCATGTATAAAATTTCTGTCCGAGAGTTTATGACA TACCTTTGAATTTAATTATGGGTGACGTAAACTTAAACTTGATAAAGTAT CACCTTGTAAAAGACCACAGATATCTTAAATGAAACACTAGCATAAAGCG ACTTGATCTTTCCCAAGCTATAGTAGTTGAAGCAAAATAATCCGTCATCT TTACGAAAAGTAGACCACAGTAGACCACAGTTTGGCACTGGCATTTTAGG GCTACTTTTTTTTCTTTCTGTAAACAATCCTCCTATATTGTTGGATTATT GCAAATCGAGCTGACAATATGTTGCAAACATATTTTCAATATATTGCCGA CATTCAGCAATATATCGTCAATATATTGTAGCCCTTTTGTTCAATTAAAA CCAAACAACTAGCATGGCTCGCACCCCCCCCCCCCCNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGCCAATGTCGTATATATC AGACATGGGCTATGTAGGAGGGCGAAGCCAAATTTGGCCCTGAGAAACTT GATTCTGTCCTCCAGCGAATTAGTTTGAAGTTTTCCCGCTCGGCACCTTT CTATCACTCAGACAGGTCCGCGCCTAAATCAGACGGCGCCGAAGGCGCCT AAAAGAAAGAGGAGACTCTAAGCTATCCAATGGACTATAAACGAGCTTCT AACTCCTTTNAGTCTCTAAAAGACTGAAACTTTTTTGTTGCGCACCCGTT AGTTAGATAAAAGCAAGATAAAAGCAAGATAGAATATAGTTCCCAAGCCC CCAGACCTTACTGCATAAAAGTTAGATACATCCAGGAAGATTTTGGTTGT AGCCCCCCCCCTGCGGGCTGGGGGGGGGGTCATGCCATGACCTTTATGTT TTCATGCAAAGTGTGATCTGATCCTTAAAATGCAAAAATGAAGACATTCT ATTGCATTCTCTAAAAGTGCACACACATGTAAATATAGCTTTGTGAATGC CATAAAATTTTTCCCCTATACTGGGACCTAAAATTTTATCAGGCTGGGGG GACCTTGTTCTCAGGGGGGACCTAAATTTGGCGGGGGGACGTAGAACCCC AGTCGGAGCCATGACTAGCTTGCAGCGAAGTGGTGAGGCGAGAGAATGGT CTTAATTGATCAAACAGCCAGTACCGAACTGCGGTCTACTAATAAGGATG GCGCATTATTTTGCTTCCAGCCAGGGATTGTGTAGCTCTATCTAGTGTTT TGTATAAGATGTCTGTGGCAAAGCTGGGTAAAATAGTCAGTGCTCTCAAA AAAATAAAATAAACTTGATATCACCTGTAGAGGTAAAACCATGGAGGAAG CAACTGATGACGTCATCAACAATCAAATACCGCAAATTAGCGAGTTGGTT AAAAATGGCGAGTTGAGTGTCGACAATATTGATGTTTTCTGTGAGAAAGG TGTCTTTGACACTGATGCAACTCGCCGAATTTTGGAAGCAGGGAAAGCAC ATAATATGGCGATCAATTTCCATGGTGATGAATTGCACCCGATGCAGTCT GGAGAGGTATTTGCCATTTTAAAGTCTTTGTATAAAATCAGAGGTTAATA GCTGAGCCATGCGTTGGCAATACATTTATTAAGTTTTCAGTCATCGACAC AAAAACGTCAAATTGTCTAACCTTTTCAATATTTCAGGAATTTTTTCGTT TAGTTTAAGGGGGGGGGGAGGTTAGAAAATTTTCGAGATTTTAATAAACG GGGGGACCTTATTGCCAGGGGGTTTGGAAATTGTACTTCTGAAAACCCAT AAATAAGGTAAATATAGGCTAAAATCAGGCTATTTAGAGCAAAATAAGGG GCCTTGTCTTTGACAGCTGAAAATATTCTTGAAAATTAATAACCGAGGTA GGGTCCTAATAAGGTCCGGGGGTTGGGAAAATTTCGAAAAATTAACAAGG GGGGGGGGGGGGCGTTTATTTGGAACCTAAGAGTAATCATTTTTCGAATT CTGGTAGTAAATGTTGCTGCCTATCCAGCATACGTCTGAAGGAAATAAGT GGCTTCAAATCCTACATAGAGGTTTAGAAAGCTTTTGGCTATATCTTACT ATTGATTTAAACTGCTTTATAGCTTGGAGCAGAGTTAGGCGCACGTGCTA TCAGTCATTTAGAAGAAGTCAGTGACAAAGGAATTGTTGCCATGAGTGAC AAGAAAGTTGCTGCTGTACTTCTACCTACAACCGCCTATATCCTTCGCTT ACAACCACCTCCAGCTAGAAAAATGATTGATCAAGGTTCGTAGTTTTTTT ATGTATTCTTCGAATAAGTTACTAAAGGCTAGAACATCAACTTTGACATT CAATATATTGAGAGTTTCATTATAAGGCTGATATGAAAAGAAGTTTCGTG TTTCATGCATTGATCTTTTTGTGTAACTATCCACAGACACGTGATTCGTA CTTCCATCAGTGCGGCTCGGTTTAGCAAGCTTAGAATGCTGTTGTCGCCA CAGTGCTCAAAACAATCGAGTGATGAACAGAGAAGTAGAGCTTGCTTGCT CCTTAAAAAAAATAGTAATTCAACAAATTCTACTTGACCTTAAAATAACT ATAGAAATCTCAATACAAGGGTTGCAAAATGAAATCAATGCAGTCAAAAC ATGTAATTACTCGAAAAAGTTCACATGATTTTATTCCCATGTTACTTGCT TTATAACTTACAGCTAATAACTTTATTAGTGTCAGTAAATTCTAACCAAT CAGAAATAAATGTCATGTCACTAAAAATTTCGAGTAAAAGCGTGACTTTA ATTTTGCAACCTGTGTATTTCACAGTTTTCAAATAGACTTAATCTCTTTT TCCTACTTGTTATAGCTTCATTTCTCATTGTAGGTGTTCCGGTTGCTTTA GGGTCAGATTTCAATCCGAACGCATTCTGCTATTCAATGGTATGTATATT CATAATTTTTAGACCATGTTCACACGTTACTGTTTCGTTTCGCTCCGGTA TGATTTGTTACGGATCGAGTGTGTTCATATTGCTTTTGGAACGTCAAAAA AGAATACGTTACAAAGCAAAACGGATGGAAACGGTTTCGCTCCACTTTTT TCATCGGAACGGAACTGCTCCGTTTTCTTGCTCCTAAACGTTCCGAAACC AATATGAACACACTCGATCCGTTACGAAAATTAATCATACCAGAGCGAAA CGGAACAGTGTGAACATGGTTTTAGACACGTTGATCTGTCTTCATTTTTT ATCAAGCGAAGAAGGCGCGTATGTAGACTCAATGTCAATTGAATACTATA CATGGTCGGGAAGTTCCAGCTCCGAGGTTGGGTTTTTTTTATTTTGGTCA CGTGATCGTTTCGTATGTGCAGATTTCGGCGGGAAACGAGTTTGCTACTT CAGGACTGAGCAGAAAATAAAAACAAACTTCATTCTATCCTTGGAGATAA ATCAAACATTNGCGCGAACCACGTGTCATTAAAAAGAACAATTAAAATCA CGTGTCCAAAACAAACTTGTAAAACAATTGAACAATCAAAATTAGCCATA TTTAGTTGGATCTTTTATTTTGACACGTGACATTTGTTTTGATTTTGTAT CCGCTGCATACAGTTTGTTTACAAATTTCGCAAGTACTGTTATGTCCCTT AAAAAAAAAATAATTCAACAAATTCTACTTGACCTTAAAATAACTATAGA AATCTCAATACAAGGGTTGCAAAATTAAATCAATGCAGTCAAAACATGTA ATTACTCGAAAAGGTTACTTGCTTTACAACTTACAGTTTTGATAACTTTA TTAGTGTCAATAAATTCGAACCAATCAGAAATGTCATGTCACAAGCACAT AAAAATTTCGAGTAAAAGCGTGACTTTAATTTTGCAACCTGTGTATTTCA CAATTTTCAAATAGACTTAATCTCTTTTTCTTACTTGTTATAGNAAGATG GCTGAACACTTTGAAACTGCTGAGATAGTCGAAACTGACTTTGAATTTGA TGTTTTGGATCTCGAAGAAGATATTTCCATATTTTTTGAGGTAGTAGAAT CCAACCTCGGGCTCCGAACCAAGCTGACTTCCTGACCATGTATATTTTTA GTGACTATGGTAGACTGGAATCATTTATAATCCGTATAATACAGTAATAT GGATGTTATATGGTAATACGATAACTGTTACGGGATAATACCAGTTTACA TTATCTACAATTTAATCCTTCCTCTACATTTTGCTTATTTTTTACTATGT CTGCATCAGGCGTCCAGCATGCTACACGTTATTTTTTAAGAACAAACTAT ATAAGAACACCAAACTTCAATGGCCAAAATGTTAAGAACAAGTTAAGAAC ATGTTAAGGCTTCAAAAATGTTGGATGTTCTTATAAGAAAAAACGTGTAG CTTGGTGAGCGTGTGAATAAATCATGATTGATAAGTTTGACGTTATTCAA TGCTACCATTTTGGTTGACAAAAGGACTGCTATACTCGCGCCCGACCCTC AAATTTTTTTCAATTTTCTTCTTCAGCCAACAGTCATGCATTTAGCATGT TGTCTTCTGCGCATGTCCATGACGGAAGCATTGATTGGCGCAACATTAAA CTCTGCTTACAGTGTTGGGCTGTCTGAAACACATGGATCCATTGAAGTTG GAAAAGTCGGTGATCTTGTGATTGTTGATGCCCCAAGGTAACGAAAATCT AGTGGTTATAATAGGAAGCCAGAGGAAACTCTGGTGGAGGCTCGTAGCTA TTCTGTCGTGCAAATCGATTGTCAATCTTGAGTATAGGGGTGAAAGACTA ATCGAACCATCTAGTAGCTGGTCTCCTCCGAAGTTTTCTTAGACTACATA ATATATTTAGTCCATGTAAAATGGGGCACTTACCTAGACCTTACTACATA TCCGCATGGTTTTCTTTTCAGGTGGGAACATATTATTTATCAGTTCGCTG CGCATGATCAAACAATTGATTACGTCATCAAGAGGGGTATAGTGTCATAC CACAAACGTTCGTAAGAATCAAATTTTATATTATTATTTGCTGGAACCTC CTAAGATGTTAAAACAATGGAGTCCCTAAGGACCCAGCACTTTATGGGAC CCTGAATGACGGTGACTCTTACTATGATATCAATTTCTTTTTTGGAATTG CACAGCCGGAAAGCTTAAGTAAAATCCTTAATTCTACAATAGTGTAGATG CCTTTTCTTTGCAAGGTACAAAGGATTTTTACCTGCATAATAACGTGGTG TCCTTGAAAGCGTCTTAAACGCCTTTAAGGTCGTCTATCCCTCAGAAAGT TTTTCCTGTTCTACTTTTTACTTACTTTGCACATTGAACTACTATAAACG CTACTGCAATTTTTATAATGCCGCCCAAAAAGGAAGCAACTTTTTGAAAG CAATTTTTAGAAACTTATAGATTTGAATTTTGATAGAATTTTTATTATAT TTATAGCATTCATTAAAAATAAAAAGTCATGGTGTGTATAGAAAATTAGC TAAGAATTTTTATTCACAAAAGAAATCTTTACAATTTATCAAATGACATA CNAACGTTCGTAAGAATCAAATTTTATATTATTATTTGCTGGAACCTCCT AAGATGTTAAAACAATGGAGTCCCTAAGGACCCAGCACTTTATGGGACCC TGAATGACGGTGACTCTTACTATGATATCAATTTCTTTTTTGGAATTGCA CAGCCGGAAAGCTTAAGTAAAATCCTTAATTCTACAATAGTGTAGATGCC TTTTCTTTGCAAGGTACAAAGGATTTTTACCTGCATAATAACGTGGTGTC CTTGAAAGCGTCTTAAACGCCTTTAAGGTCGTCTATCCCTCAGAAAGTTT TTCCTGTTCTACTTTTTACTTACTTTGCACATTGAACTACTATAAACGCT ACTGCAATTTTTATAATGCCGCCCAAAAAGGAAGCAACTTTTTGAAAGCA ATTTTTAGAAACTTATAGATTTGAATTTTGATAGAATTTTTATTATATTT ATAGCATTCATTAAAAATAAAAAGTCATGGTGTGTATAGAAAATTAGCTA AGAATTTTTATTCACAAAAGAAATCTTTACAATTTATCAAATGACATACA AAAGGTATTATTTCCATTTGGCAGTTATCCCGGCCATGGCCTACTGTATT TTAAAAATTTATCGCGACTTTTTAATCTCATACGATTTAAAACTTTTTGA AGTATTTTTAGTGAAATTTTGATGTATTAGAATCATGTTAATAAAAGGAC ATTTTGCTAACTCCCCTGTAAAAATAAGTTAATAAAC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00065215TCONS_00065215Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00065215-proteinTCONS_00065215-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_433supercontigscaffold_433:452172..461908 -
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
AMDHD1probable imidazolonepropionase Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
31.09 30.43 12.18 11.51 4.91 3.26 6.26 6.56 9.88 8.39 7.76 10.37 8.28 9.41 12.28 16.24 22.14 21.32 3.82 4.43 9.13 8.91 27.03 24.56 10.4 11.39 43.97 32.98 19.11 18.27